2024-09-28 09:23:08, GGRNA.v2 : RefSeq release 225 (Jul, 2024)
LOCUS NM_001276777 2087 bp mRNA linear INV 11-JUN-2024 DEFINITION Caenorhabditis elegans non-specific serine/threonine protein kinase (prk-1), mRNA. ACCESSION NM_001276777 VERSION NM_001276777.4 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 2087) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 2087) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (11-JUN-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2087) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (23-MAY-2024) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 2087) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Feb 2, 2021 this sequence version replaced NM_001276777.3. FEATURES Location/Qualifiers source 1..2087 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="III" gene 1..2087 /gene="prk-1" /locus_tag="CELE_C06E8.3" /db_xref="GeneID:175980" CDS 189..1958 /gene="prk-1" /locus_tag="CELE_C06E8.3" /standard_name="C06E8.3d" /note="Confirmed by transcript evidence" /codon_start=1 /product="non-specific serine/threonine protein kinase" /protein_id="NP_001263706.1" /db_xref="GeneID:175980" /translation="
MTRAPGDAGAVRRQRLWLYESVRMIKRKLQDLAVCCSYQVDFLHEKKHSVKEFKRKYEVLDEIGRGGFGIVYEATTRQDGQQPVAVKFVQHKHVRSWTMTCRQLIPSEVCHLETCEDIPGVIKILDWFANSKGFLIVMERPANCMDLFDMVSVHGPLNEDMGKFIFKQVITTVFNMYSKHGLLHRDIKDENLIVNMNTGEVKLVDFGATAYAEKATKKEFQGTRSYCPPEWFRDQLYLPLEATSWSLGVLLFILLTGKLPFRNEIQICLGNVKFPPDLSKEVCQLVKSCLTTSTSARASLAQIAAHPWMETDKPFFGGDLTFEEALMEIKNPPVVIEDKEAEEEDNDLNDVVILTRSRESRTDLDAESICTMVTAVEDRYEPSIAVKELEQEEIVETGETTNLMRSESRYDNISSSSFCDYVSLVSSSYDDQFTSTSDIYQSACEVFPHTGSSSSLSRSMGAVKSASAYNLVRMRKKSSIFKSFDTELDPVSENDHQPLIPETSSATCQSTYSNDEDVTISEKVVSPAQPLPPPLSPRKGSLQCFESVPRSRDSVIRMSRHRPLQFAIDSSSPPPALAIFQVSPTASVG"
misc_feature 354..1115 /gene="prk-1" /locus_tag="CELE_C06E8.3" /note="Catalytic domain of the Serine/Threonine kinase, Proviral Integration Moloney virus (PIM) kinase; Region: STKc_PIM; cd14005" /db_xref="CDD:270907" misc_feature order(375..389,399..401,441..443,447..449,552..554, 600..611,624..626,630..635,639..644,744..746,750..761, 765..767,801..803,849..857,861..863,945..947,957..965, 972..974) /gene="prk-1" /locus_tag="CELE_C06E8.3" /note="active site" /db_xref="CDD:270907" misc_feature order(375..389,399..401,441..443,447..449,552..554, 600..611,624..626,744..746,750..752,756..761,765..767, 801..803) /gene="prk-1" /locus_tag="CELE_C06E8.3" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270907" misc_feature order(624..626,630..635,639..644,744..746,750..758, 849..857,861..863,945..947,957..965,972..974) /gene="prk-1" /locus_tag="CELE_C06E8.3" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270907" misc_feature order(798..830,837..863) /gene="prk-1" /locus_tag="CELE_C06E8.3" /note="activation loop (A-loop); other site" /db_xref="CDD:270907" ORIGIN
catttttcaataaggaacacactaaaaactcttaaatctctgaaactttttatttctggaataccaccacaattcctgaattgtgctagaaaacaattgccatcagaggtacacaaaagtgttttccattttcttatttcattaaatcctggctactgttgcttaattttaattaaaactattccaatatgacacgagcaccaggagacgctggagctgttagaaggcaaagattgtggctttacgagtccgtcagaatgatcaaacgaaaattacaagatttagccgtatgctgctcgtaccaagtggatttcctacacgagaaaaaacattcggtaaaagagttcaaacggaaatacgaagtattagatgaaattggacgtggtggattcggaatagtgtatgaagcaacaactcgacaggatggacaacagccagttgccgttaaatttgtgcaacataaacatgtcagaagctggacaatgacatgccggcaactaattccttcagaagtatgtcatttggagacgtgcgaagacattccaggtgtgataaaaatcctcgattggtttgcaaattcaaaaggttttctaatcgtgatggagcgaccggccaattgtatggatctgttcgatatggtttctgtacatggtccactcaacgaggatatggggaaatttatatttaagcaggtaatcacaacggttttcaatatgtacagtaagcacggacttctgcatcgagatattaaagatgagaatttgattgtgaatatgaatacaggagaagtgaaattggtcgatttcggagcaacagcatacgcggaaaaggccacgaaaaaagaatttcagggcactcggtcatactgccctccagaatggttccgtgatcaactttatcttccactcgaagccacatcctggtctctcggagttctactcttcatccttctaaccggaaaactcccattccgcaacgagattcaaatctgtcttggaaatgtcaaatttccacctgatctctcaaaagaagtgtgtcaactcgtcaaaagttgcctgacaacttctacgtctgcacgtgcatctttagcacagatagctgctcatccatggatggagactgataaaccattttttggtggagacttgacttttgaggaagctcttatggaaatcaaaaatcctcctgtagtgatcgaagacaaagaagctgaggaagaggataatgatctcaacgatgtagtgattctgacgagaagccgtgaaagtcgaactgatttggatgcagaaagtatttgtacaatggtcactgctgttgaagatcgatatgagccatcgattgctgtcaaagagttggagcaagaagagattgttgagacaggcgaaacgacgaatcttatgcgtagcgaatctcgttacgacaatatttcatcgtcctctttctgcgattatgtctcattggtctcctcatcatacgacgatcaattcacttcgacttctgatatctaccaatcggcttgtgaagtgttcccacacacaggctcgtcatcctcactgagcagaagcatgggagcagtcaaatcagcatccgcctataatttagttcggatgcgaaagaaatcgagtattttcaaatcatttgacacagaactcgatccagtttctgaaaacgatcatcaaccattgattcctgagacgtcgtcagcaacgtgtcagtcaacatacagtaatgatgaagatgtgacaatatcggaaaaagttgtatcaccagctcagccactgccaccacctctgtcccctcggaaaggaagccttcaatgcttcgaatcagtaccaagatctcgagattctgttatcagaatgtcacgtcatcgtccacttcaatttgcaattgattcatcatcaccaccgccagctcttgccatttttcaagtcagcccaacagcatctgttggttgattttcgacatttttctttgtgaatttttcttatatagaagggtaaaatcgggtcaatcatttccacttgtacagcacctcttctatgggttttaaaagtttcgtttccttcttgaaaaatgaattgttt
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@meso_cacase at
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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