2024-09-28 09:26:19, GGRNA.v2 : RefSeq release 225 (Jul, 2024)
LOCUS NM_126743 839 bp mRNA linear PLN 20-OCT-2022 DEFINITION Arabidopsis thaliana uncharacterized protein (AT2G07692), partial mRNA. ACCESSION NM_126743 VERSION NM_126743.2 DBLINK BioProject: PRJNA116 BioSample: SAMN03081427 KEYWORDS RefSeq. SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 839) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D., Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V., Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L., Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L., Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H., Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D., Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and Venter,J.C. TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 761-768 (1999) PUBMED 10617197 REFERENCE 2 (bases 1 to 839) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 839) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter REFERENCE 4 (bases 1 to 839) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003071). On Apr 18, 2007 this sequence version replaced NM_126743.1. COMPLETENESS: incomplete on the 3' end. FEATURES Location/Qualifiers source 1..839 /organism="Arabidopsis thaliana" /mol_type="mRNA" /db_xref="taxon:3702" /chromosome="2" /ecotype="Columbia" gene 1..>839 /locus_tag="AT2G07692" /gene_synonym="T18C6.10; T18C6_10" /db_xref="Araport:AT2G07692" /db_xref="GeneID:815368" /db_xref="TAIR:AT2G07692" CDS 429..839 /locus_tag="AT2G07692" /gene_synonym="T18C6.10; T18C6_10" /inference="Similar to RNA sequence, EST:INSD:EG447243.1,INSD:EG445323.1,INSD:EG445324.1, INSD:EG446718.1,INSD:EG446724.1,INSD:EG446714.1, INSD:ES135997.1,INSD:EG447252.1,INSD:EG447257.1, INSD:EG444485.1,INSD:EG446713.1,INSD:EG445394.1, INSD:EG445322.1,INSD:EG445327.1,INSD:EG445326.1, INSD:EG446727.1,INSD:EG446711.1,INSD:EG446712.1, INSD:EG447258.1,INSD:EG447256.1,INSD:EG447255.1, INSD:EG445321.1,INSD:EG447251.1,INSD:EG445325.1" /inference="similar to RNA sequence, mRNA:INSD:BT030649.1,INSD:AY461623.1" /note="unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:ATMG01300.1); Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink)." /codon_start=1 /product="uncharacterized protein" /protein_id="NP_178784.1" /db_xref="Araport:AT2G07692" /db_xref="GeneID:815368" /db_xref="TAIR:AT2G07692" /translation="
MPRTELILNAAVILYTMIPPDAHSLGSEGRVVNGNWRDTSDVKEGSLPREVTKQVNGSLSSRTKQVNEFSKHTRFLVDISFSCCSLINRSLWESAQKDELSDSFGKALTTKPECLAVRETPRNFRRNLCLVIPSLN"
ORIGIN
ctttgatagaacggagatggtaattaggctgctggtagtacaactaggctctttctttgcaagattctcagcatctacggggagaatgtcccaaagccccttttctccaattgcaattccagagggatatccttttagacgctctcccggcattagcggaataagagcagtgggacttgagctagtgagatagattcactttcactatttgaatgcccctcttcgatttcgatgagcagaggattttcggacattagctttagcagaccatttgcggcatatactactatttccatgaagactataactgaagacttactttcttattaataaacttacactaggaatagccccgagaacccatagttgcccgctacgccccttctgctactttctttctaggtccaataggctctttgtcggtcttgatgccgagaactgagttaatcctaaatgcagccgtgatcttatatacgatgataccaccagacgcgcattccttgggatcagaaggaagagttgtcaacgggaactggcgagacacttctgacgttaaagaaggaagtcttccccgggaggtaactaaacaagttaatggaagtctgtcttcccgaactaagcaagttaatgagttcagcaagcacacaaggtttcttgtagacataagtttcagttgttgttccctaataaatagatctctttgggaatcagcacagaaagatgagcttagtgattccttcgggaaagcacttacaacaaagccagaatgtttagctgtgagagaaacccctaggaactttagaagaaatctgtgcttagtgattccttctttgaattga
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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