2024-09-28 09:24:21, GGRNA.v2 : RefSeq release 225 (Jul, 2024)
LOCUS NM_001341570 6812 bp mRNA linear PLN 20-OCT-2022 DEFINITION Arabidopsis thaliana separase (ESP), partial mRNA. ACCESSION NM_001341570 VERSION NM_001341570.1 DBLINK BioProject: PRJNA116 BioSample: SAMN03081427 KEYWORDS RefSeq. SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 6812) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 6812) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 6812) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter REFERENCE 4 (bases 1 to 6812) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). COMPLETENESS: incomplete on the 5' end. FEATURES Location/Qualifiers source 1..6812 /organism="Arabidopsis thaliana" /mol_type="mRNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" gene <1..6812 /gene="ESP" /locus_tag="AT4G22970" /gene_synonym="AESP; EXTRA SPINDLE POLES; F7H19.150; F7H19_150; homolog of separase; RADIALLY SWOLLEN 4; RSW4; SEPARASE" /note="Encodes a separase (ESP), homologous to human and mouse separase protein. Separase is a capase family protease required for the release of sister chromatid cohesion during meiosis and mitosis. Arabidopsis separase contains a predicted 2Fe2S-ferredoxin domain that is not present in the proteins of other organisms. Also contains a putative EF-hand calcium binding domain. Mutant seeds exhibited embryo arrest at the globular stage. The endosperm also exhibited a weak titan-like phenotype. Transgenic plants expressing AESP RNA interference (RNAi) from the meiosis-specific DMC1 promoter exhibited alterations in chromosome segregation during meiosis I and II that resulted in polyads containing from one to eight microspores. Plays an essential role in embryo development. Required for the removal of cohesin from meiotic chromosomes and establishment of meiotic nuclear domains. This gene was also identified through the rsw4 mutant. Lines carrying recessive, temperature-sensitive mutations exhibit reduced anisotropic growth at 30 degrees Celsius. Microtubules and cellulose microfibrils are not depleted or disoriented in the mutants at the restrictive temperature." /db_xref="Araport:AT4G22970" /db_xref="GeneID:828396" /db_xref="TAIR:AT4G22970" CDS 1..6546 /gene="ESP" /locus_tag="AT4G22970" /gene_synonym="AESP; EXTRA SPINDLE POLES; F7H19.150; F7H19_150; homolog of separase; RADIALLY SWOLLEN 4; RSW4; SEPARASE" /codon_start=1 /product="separase" /protein_id="NP_001328112.1" /db_xref="GeneID:828396" /db_xref="Araport:AT4G22970" /db_xref="TAIR:AT4G22970" /translation="
MASSGDDLRLLSLIDVGDNVFSSFSDYLKPFSTLSTSRKKQDRATTIRALAKQFLPFLNKSISLLPKRLSVANSDKEARESALDLFRAYELCLDCLELVSAQLACKPHTVQSQRLRMIHCLDVWGLYENVYTEAFKVLEKLRGSDSKSRKSRLLPEVQDGDAEMALVVVDAVAAIFRAVAMSQQLDDKRYRKVLLLLEEVGGWLRVLDAKVYEKLHRAMVTSMGKCAVSLVREAERFNGDLVISFCDLTVKEHYKSALSKDRVYKFAREVLSVLFGFKDRKMSVTIDISMSVLRSLSCQFEDESNENLMEFFDLVDYCAHKFRAAGDMYCAKVSKKLNEMAAIFVEAIPQLNLVLRLYSTGLSITVCNSKLGEIKLEDSTDDWKIQAMFDDDARWQSLVSLLGMVDSYSGDEGNQTGSSSIGGHRNYNNKTHDSCKDRNKITCWPQYVDALKFLCQPLADFIYSVKRKIVLETEMSCASAHLITIHDAFLQFCDGCLFLQRCTSDKGDREIANNKAFLNAAMGAFIVSLRTQLKLEISAHLVEDVIGSPWIQSQELKYLIATLYNIGIVLYRNKELNKACEALKLCSKVSWRCVELHCHMFVNQSSSSDNDLSEDAIMDFVGEACNRCAFYLDILQKCSRRKIRQNIVHILENWLSAEHLIRRLPGPEAIVKQWVKIERECHTDLDAAGSCTTLYSLLSSSQKKSKRGIGKILEQELLAYDRVLPLRSNLGQQTRIKIADILLKDVYVTEDMHIERARILIWKARMTRTSGTEHITECICFLSEAISILQGELHHGPNEEGSPSSHMLPIAYCLRAFCTQEADPNSKKVFQDISTSLNLWLRILSLDDSGDSLPTENIIPLLYNMIDLMSVKGCTELHHHIYQLIFRLFKWKNVKLEVCLAMLWECRRLSHALCPSPISDAFIQTLSENCADKSTCIDFWMDCLKDSKAKLIGFQQNFHDLHNKDEGPFQSDITIDDIKDAASELISSASLSGNSSFAAAYLYYDLCERLISFGKLSEALSYAKEAYRIRTLIFQDKFKYTAEKHIEKHNEDGKISEIRTFSIKNFQVYRLLATDFWPCGNFLWDINRCYLSPWSVLQCYLESTLQVGILNELIGNGLEAETILSWGKAFSCSQSLFPFVVAFSSALGNLYHKKQCLDLAEKELQNAKEILIANQRDFSCVKCKLKLEVTLDKQLGDISRKQIDRVSQTDGFLHAESLFSAALGKFCCSAWKSCIRSHGEEIAEEIVIDRNGGEGLGHNSSKTKLSIKEPPGNRGSRRGGRANKTCLSKDQDLISEPTSRLTRSMRHSLREQCQNRSNVPEVVSKKPNLCDRSVGSRGERVLLDTSNALPGFCICYKEKRQQCLSEEVTESGSLNNLVSLKWELCHRKLASSILVSLGKCLGDSGRIHLAHEALLHSISVLFKSTWSSHNQPSVSQLLEFIGKEVTRDVFAVDRAIILYNLCWLNLRNYHCRKSRSICCDLFHIPFTKLVSWLMLAFVLSGEVPILFQKVSRLLASLYLLSSSNSEFTFESDGNELSASHWVSFFHQASLGTHLSYHFISNLSQKHKSQCLSDKECTEATCSSCMVPEDLDLPRLAPDRTQDLVQFAKEFFINLPSSTIICISLLGGALNQLLQELMHIRSPVCAWVLISRLNPESQPVATLLPVDSIVEDMSDDSANLSSTEATQVKSLKGPWLCPWGTTVVDEVAPAFKSILEESHSSSSTTEEDTIESRGLWWKKRKKLNHRLGIFLRNLEASWLGPWRCLLLGEWSNYKLPDSAQKKLVNDLKSKCKMEVNEMLLKVILGGGTDNFKGEACVAQLSLRNGCYVGRGGYLYEEDSCKTPTAASNISESRHELALKLIHDAASKLGQQDGHENREPIILVLDPEVQMLPWENIPILRKQEVYRMPSVGCISAVLKKRSLQGEPAKSHVASFPLIDPLDSFYLLNPGGDLTDTQVTFESWFRDQNFEGKAGSEPSAIELTEALETHDLFLYFGHGSGAQYIPRREIEKLDNCSATFLMGCSSGSLWLKGCYIPQGVPLSYLLGGSPAIVATLWDVTDRDIDRFGKALLEAWLQERSDSSSEGGCSQCESLANDLAAMTLKGTKRSRKPSSRNKPAQSDVDGSGKIECNHKHRRKIGSFIAAARDACNLQYLIGAAPVCYGVPTGITRKKGIDALLPSSSR"
misc_feature 4924..6183 /gene="ESP" /locus_tag="AT4G22970" /gene_synonym="AESP; EXTRA SPINDLE POLES; F7H19.150; F7H19_150; homolog of separase; RADIALLY SWOLLEN 4; RSW4; SEPARASE" /note="Peptidase family C50; Region: Peptidase_C50; pfam03568" /db_xref="CDD:460974" ORIGIN
atggcgtcctctggcgacgacctccgtcttctctctctcatcgacgtcggcgataatgtcttctcttccttctccgattaccttaaacctttctctactctatccacttcccggaaaaaacaagaccgagcaaccacgattcgagccctagctaagcaattccttcctttcctcaacaaatcgatctctctcctaccgaaacgtctctccgtcgcgaattctgataaggaagctcgtgaatcagcattagatctgttccgtgcttatgaactttgtttggactgtttagaattggtctctgctcaattagcttgtaagcctcacactgttcaatctcagaggctaaggatgattcattgtctcgatgtttggggtttgtatgagaatgtgtatactgaagcgtttaaggttctggagaagctaagaggctctgatagcaaatcccggaagtcccggttgttgccggaggttcaggatggagatgcggagatggctttagttgttgttgatgctgtggcggccatctttagggctgtggcaatgagtcagcagttagatgataagcggtatcggaaagttcttcttttgcttgaggaagtcggaggctggttaagggtcttagatgctaaggtgtatgaaaagttgcacagagcgatggtgacaagtatgggtaaatgtgctgtttctctcgttagagaagctgagcgtttcaatggggatttagtgatttctttctgcgacttaactgtgaaggaacattataaatctgcattatcaaaagatcgagtttataagtttgctcgcgaggtgctttctgttctgtttggatttaaggatagaaaaatgtcagtgaccattgacatttcaatgtctgtgttgcgcagcttatcttgccaatttgaggatgaaagtaatgagaatttaatggagttttttgacctagtcgattattgcgctcacaagtttcgagcagcaggagacatgtactgtgcaaaagtttcaaaaaaattgaatgagatggcagctattttcgtagaggcaataccccaacttaatttggttcttagactgtattcgaccgggctgtccatcacggtttgcaattccaagctcggagaaattaagctagaagattcaacagatgattggaagattcaagctatgtttgatgatgatgctagatggcaaagcttagtttctttactcggcatggttgatagttactcaggtgatgagggcaatcagactggttcatcatcgattggtgggcataggaactacaacaataaaacacatgatagctgtaaagacaggaacaagattacttgttggccacaatacgtagatgccttgaaattcttgtgccaaccgcttgcagactttatatattctgtgaaaagaaagattgtgctggagacagaaatgtcatgcgcctctgctcatctaattactattcacgatgcctttctccagttttgtgatggctgtctcttccttcagaggtgcacgtctgacaagggagatagagaaattgccaataacaaagctttcttaaacgcggctatgggtgctttcattgtctcattgagaacccaacttaaattggagataagtgcccatctagttgaggatgtaattggaagcccatggatccaatctcaagaactcaagtatctaattgcgacgctgtacaatattggtatcgttttgtacagaaataaggagctaaacaaggcttgtgaggcgcttaagctgtgctccaaggtatcatggagatgtgttgaactacattgtcatatgtttgtaaatcagtctagttcatctgataatgacttgtcagaagatgccattatggattttgtgggcgaagcatgtaataggtgtgcattctacctggatatactccagaaatgtagcagacgtaagattagacagaatattgttcatattctagaaaattggttgtcagctgaacatctgattagacggttaccaggccctgaggcaattgtaaagcaatgggttaagatagagcgggaatgtcacacggatctggatgcggcaggttcttgtacaactttgtactcattgttatcatcttctcaaaaaaagtcaaagcggggtatcggaaaaatccttgagcaggagcttcttgcctatgacagagtgttacctttaaggtcaaatctaggtcaacaaacgcgaatcaagatagcagatatcctcttgaaggatgtttatgtcactgaggatatgcatatagagagagcaagaattttgatatggaaagcacgaatgacaaggacatctggaactgaacatataaccgagtgcatttgttttctgtctgaagcaatctctatattgcagggtgagttacatcatgggccaaatgaagagggttctccatcttctcacatgttacctattgcgtattgcttgagagctttttgtacccaggaagctgacccaaactcgaagaaagtctttcaagatattagcacttcactaaatctctggctaaggattcttagcctagatgatagtggagacagtctaccaacagagaatataattccgttactgtataatatgattgatttgatgtcagtgaagggatgtacagagctccatcatcatatataccaactgattttcagattgtttaaatggaagaatgtcaaattggaggtctgccttgcaatgctgtgggaatgtagaaggcttagtcatgccttatgcccttcccccataagtgatgcctttatccagaccttatcagagaattgtgctgacaaatccacatgcattgatttctggatggattgcctgaaagattcaaaagcaaagttaattgggttccagcagaacttccatgatttacataataaggatgaaggtccctttcaatcagacatcacaattgacgatattaaagatgcagcatcagaactcatctccagtgcatcactctctggtaattcatcttttgcagctgcatatctctattatgatctctgtgaaaggctcatatcatttggaaaactttctgaggctctttcatatgcaaaagaagcctataggataaggactcttatatttcaagataaatttaagtatacagctgagaagcatatcgaaaaacacaatgaagatgggaaaatatcagaaatacggacttttagcataaaaaatttccaagtctacagattgttagcaactgatttttggccatgtggaaattttctctgggacatcaatcgctgctacctaagtccttggagtgtactccaatgttatttggaaagcacccttcaggttggaattctgaatgagctcatagggaatggactggaggcagaaaccattctatcatgggggaaagccttttcatgctcgcaaagtctattcccttttgtagttgcattttcttctgccttaggaaatctataccacaaaaagcagtgtctggatctggcagaaaaggaactccaaaatgcaaaagagatattaattgctaatcagcgagatttttcttgcgtaaagtgcaaactgaagttggaagttacattggataaacaacttggagacatatctcggaaacaaattgatagagtttcacagacagatggattcttgcatgctgaaagcttgtttagtgctgccctgggaaaattctgttgctcagcatggaaaagctgcattagatcacatggggaagaaattgctgaggagatagtgattgatagaaatggaggggaaggtttaggacataattcaagtaaaacaaagctcagtataaaggagccaccaggaaacagaggctccaggaggggtggaagagctaacaaaacttgtttgtcaaaggatcaggatttgatatctgagccaacatcaaggttgactcgatctatgcgtcactcacttagagagcaatgccaaaaccgttctaatgtgcctgaagttgtttcaaagaagcctaatttatgtgatagatctgttggttctaggggtgaaagggttttgttggacacgagtaatgcactccctggcttttgtatttgctacaaagaaaaacgtcagcagtgcctctcggaagaagtaacagaatctgggtctctcaacaatttagtaagtttgaaatgggaactctgccataggaagcttgcgtcctcaatacttgttagccttggaaaatgtttgggagactctggtagaattcatctagctcatgaggctttactgcatagtatctctgttttattcaaaagcacctggtccagccacaaccagccttctgtcagtcagttgctggaatttatcgggaaagaagttacaagagatgtatttgccgttgatcgtgcaataatattatacaacttgtgctggttgaatttgcggaattaccactgcaggaagagtaggtctatctgctgtgatctgtttcatatccctttcacaaaactagtgtcatggttaatgttagcatttgtactcagcggagaggttccaatattatttcaaaaggtttcaagattgcttgcctctttatatctgctttcttcctcaaattctgaattcacattcgaatctgatggaaatgagctgtcagcaagtcattgggtctcatttttccatcaagcctcgcttggtacccatctcagttaccatttcatttcaaatttgagccaaaaacacaaatcacagtgcctctcagataaagagtgcacagaggctacttgctcgagttgcatggttcctgaggatttggacttacccaggcttgctcctgaccgtactcaagatcttgtacaattcgctaaagaatttttcatcaatcttccaagctcaacaatcatctgcattagtttgcttggaggtgctttaaaccaattgttacaggagctaatgcatattcgttcacctgtttgtgcctgggtgctcatatcacgcctaaacccagaaagtcaaccggttgccacacttttacctgtagattcgattgtagaagacatgtcagatgacagtgcaaatcttagctctaccgaagcgactcaagtcaagagtttaaaggggccctggctttgtccatggggtaccaccgtggttgatgaggtagctccagcatttaaatcaatattggaggaaagccactcatcttcttctactactgaagaagacacaatagagagtaggggcctgtggtggaaaaagagaaagaaacttaatcatcgtctgggaatattcctaaggaatctagaagcttcctggctgggtccctggaggtgtctgcttctcggagaatggtcgaactacaaattgcctgactcagcgcagaaaaagctggtaaatgatctcaagtccaagtgcaaaatggaagtaaatgagatgcttttgaaggttattcttggaggtgggacggataactttaaaggagaagcatgcgttgctcagctttctttaagaaatggttgctatgtaggtagagggggatatctttatgaagaagatagctgtaaaactcctactgctgcgtctaatatatctgaaagtaggcatgaattggccttaaaactgatacatgacgcagcaagcaaactagggcaacaagatggacatgaaaatagagaacctatcattcttgtgttagatcccgaggttcagatgcttccttgggagaatattccaatactaaggaaacaggaggtgtaccgcatgccttccgtaggttgcatatctgccgtgctaaagaagcgcagtcttcaaggagagccagcaaaatctcatgttgcttccttccctcttattgatccgctagattcattttacttgttgaatcctggtggtgatctcaccgatacacaagtcacgtttgagagttggttcagagatcaaaactttgagggtaaagctgggtcagaaccaagtgctatagagttgacagaagcattagaaactcatgatctctttctatactttggtcatggaagcggagcacagtatatacctaggcgtgaaatagagaagctagataactgttctgcaactttcttaatgggatgcagtagtggttcactatggctaaaaggctgctacatcccacaaggtgtaccactttcttatctcctaggtggatctccagccattgtggcgactctatgggacgtaacagaccgagacattgatcggtttgggaaagcgttgttggaagcatggttgcaagagaggtcagattcttcttcagagggtggctgcagccaatgtgagtcattagctaatgaccttgcagcaatgactctaaaaggcaccaagaggtcaaggaaaccatcatcgcgtaacaagccagctcaatcagatgtggatgggtcagggaagattgagtgcaaccacaagcatagacgtaaaatcggttcattcatagccgcggctcgagatgcgtgcaacttgcaatacttgattggggctgcgcctgtctgttatggtgtgccaactggtatcactaggaaaaaaggaattgatgctcttcttccttcttcatctcgttagtaggttagagcatctcttaaaatcctcattgtttggtcgtataacaattttgagggagcaaataaatttaggagttaggacttcagatcagagattttatgacaacaacgcaagagaagagaaaaaaggagactctagtctagagatatatattcatccctgtttttttatataacaaaattgtaaaaaaaaatatcacatgatgtattgtcctcgaattctatgttataaaagtgttagtaatatatgatccatttttgtgtatt
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Nucleic Acids Res., 40, W592-W596.
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