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Previous release (v1)
2026-11-11 16:01:50, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XR_011190177 6699 bp RNA linear VRT 18-OCT-2024 DEFINITION PREDICTED: Lepisosteus oculatus dicer 1, ribonuclease type III (dicer1), transcript variant X3, misc_RNA. ACCESSION XR_011190177 VERSION XR_011190177.1 DBLINK BioProject: PRJNA1158843 KEYWORDS RefSeq. SOURCE Lepisosteus oculatus (spotted gar) ORGANISM Lepisosteus oculatus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_090703) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_040954835.1-RS_2024_09 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 09/13/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6699 /organism="Lepisosteus oculatus" /mol_type="transcribed RNA" /isolate="fLepOcu1" /db_xref="taxon:7918" /chromosome="8" /sex="male" /tissue_type="blood, gills" /dev_stage="adult" /geo_loc_name="USA: Vacherie, Louisiana" /lat_lon="29.929889 N 90.747444 W" /collection_date="2023-04-11" /collected_by="Ingo Braasch, Allyse Ferrara" gene 1..6699 /gene="dicer1" /note="dicer 1, ribonuclease type III; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins" /db_xref="GeneID:102684602" misc_RNA 1..6699 /gene="dicer1" /product="dicer 1, ribonuclease type III, transcript variant X3" /db_xref="GeneID:102684602" ORIGIN
tcgcccctcggcagcccaatcggggcgtgtcgccagacggtttctggaaaaaaatgacgggggcaacgttctgcagggaatttaacacgcacagatgagcgaaggggacgcagtgtacaaggcgcgctctgattgggcagtatgccatgtataacctttgcccccggtaaaatcaccaatcgaatgtctcgtttcatgtgtttcttcctcggcgacaaagctagatttcgtattcgtaacttcttgtgcgcaatgtccgggtggcactgatgcgctgtggaaatgggggcagttaacgtaatgtgcgtagtggttgtcagtgcagtctcgggcccaggtgaatgggagtatcgtggattaatctgacagcggcaggagggaatggcgaaaagagtaaacacacaacagacgtttttctgcaaggcgctgaactaagggcgtttcattagtgcaagaaaagtgtaccaacttctcaggctggaccagtgtggaacaagagattaaaaggaggctaatataatattgaagattaatatgagctgacttgaagcagctgaacatgaagccaaaaattctcactaactggtcgcatattgaagtctctaaaacagaaacttaagcttcatgaggacagaacggaatgagataaacactggagagtagaagcccttgctttgcaattcctaagcatggcgggactacagctggtgacccctgcttcatcgccaatgggtcccttcttcggactcccatggcaacaagaagcaatccatgataacatttatacaccaaggaaatatcaggttgaacttcttgaagcagctcttgaacacaatactatcgtctgcttaaatactggctcagggaagacatttattgcagtacttctaacaaaggaactctcccatcaaatccggggtgacttcagaaaatgtgggaagagaacaattttcttagttaatgcagcctcatatgtgactcagcaagcagccacagttcgaacacattcagatcttcacgttggagagtacagcagtctcgaagacactttgccatggacagaagagaagtggaatcaagaaatgactgaaaaccaggtgcttgttatgacttgccacgtctttctgcatgttttgagaaatggattcttgccactatctaaaatcaacctgctggtgtttgatgagtgtcatcttgcaattatggaccatccctatcgggagatcatgaggatgtgtgagaactgcccatcatgtcctcgaatcctgggtctcactgcctccatcttaaatggcaagtgtgatccatctgaactggaggagaagattcagaatctggaaaggatcttgaaaagcagtgcagaaactgctacggacctggttgtcttagacagatactcgtctcaacctcgtgaagttgtattggattgtggaccatatgtggacaaaagtgggctgtgtgagaaactcttgaatgaattggatgaagcacttaattttcttaatgactgcaacatatctgtgcatcgtgaagacagagatccaaccttcatttcaaaacaggtgttgagtgactgtcgagcagtgctgacggttttggggccgtggtgtgcagataaagcagctgggatcatggtgcgggagctccagaaatacattaagcacgagcaagaggacttgaaccggaaattcttattgtttacagacactattttgcggaaaatccatgcactctgcgaagagcatttctcacctgcctcacttgacctgaagtttgtgaccccaaaagtaattaagctgcttgaaatcttgcatgagtacaagcccttcgagcggcagcagtttgaaagcgtcgagtggtacaacaacaggaaccaggataactatgtttcctggagcgattctgaagatgaggatgaggatgatgagattgaagataaagagaaacctgaggccaattttccttcccctttcaccaacattctctgtgggatcatttttgtagaaaggcgctacactgcggttgtcttaaacaggctcataaaggaagctggcaagcaggatccagagcttgcctacatcagcagcaatttcataactgggcacagcattggcaagaaccaacctcgaaataaacagatggaggtggagttcagaaagcaagaagaggttcttcggaaatttcgcgctcatgagaccaacttgcttattgcaaccagtattgtggaggagggtgttgatattccgaagtgcaatttggtggttcgctttgacttaccaacagagtaccgctcctatgtgcagtctaaaggcagagcgagggctcctgtctccaactacataatgttggcagacaccgagaaaacagaaacatttgaagaggatctcaaaacctacaaagctatagaaaagattctgaggaataagtgctcaaagtcagcagattgcagtgagtttgaaatggaacctgtcctggatgatgataacattttacccccttatgtgctgagatctgaagatggaggcccaagagttactattaacacagccattggtcacatcaacaggtactgtgccaggttacctagtgatccattcactcacctggcaccaaagtgtaaaacagtggagctacaggatgggatttatcagtctactctttaccttcccatcaactctcctctcagagttccagttgctgggcccaaaatgaattgtgcaagactagctgagaaagcagttgcccttgtctgctgtgaaaaattacacaaaataggtgagctggatgaccatctgatgccggtggggaaggagactgtgaagtacgaggaagagctggatttacacgatgaggaggagacaagtgttccagggaggccaggatccaccaagaggaggcagtgttatccgaaagctattccagagtgtctgagagccagttacccagttcctgagcagccctgctacctgtatgtgatagggatggttctcaccactcctcttcctgatgagctcaacttccgtaggaggaagctctatcctccagaagacaccaccaggtgtttcggaatattaacagccaaaccaatacctcggatccctcacttcccagtctacactcgttcaggagaagtcaccatatccattgagctgcagaagtctggcttcaccctcagtgcccagcagctgcagctcattaccaggctccaccagtacattttctcccacattcttcgtcttgagaaacctgcactagagtttaaacctacagaagctgattcagcctattgtgttctacctcttaatgttgttgatgactctaacactttggacttggacttcaagttcatggaagatattgagaactctgaagcacgtattggcattcctagcacacagtacacaaagcagaaccctttcactttcagactggaggactaccaagacgcagttatcattccaaggtatcgcaattttgaccagcctcatcgtttctatgtagcagatgtctacactgatcttacacccttgagtaaatttccatctccggagtatgaaacttttgccgagtactacaaaaccaagtacaaccttgatctgtccaacttaaaccagcctcttctggatgtagatcatacatcctcaagattgaaccttttaaccccacgacaccttaatcaaaaaggtaaagcccttcctttgagcagtgctgagaagagaaaagcaaaatgggaaagcctgcaaaataaacagattttagttcctgagctttgcgccattcaccccattccagcttccttgtggagaaaagcagtctgtctgcccagcatcctctatcgtctacactgccttctaactgcagaggagctccgagcccagacagccagtgatgcaggtgttggggtcaaagctctgcctccagagtttaggtaccctaacttggattttggatggaagaaatctatagacagcaaggctttcatctcaagtcccagctcttgcatagaagaaagtgaaaattactgtaagcacagcagaactgtagcccctgaaaatgctgcacatcaaggtgctaaactagaagactcctcaccaccgagggggactcagccatctgtgaactgcaccacacctgttgagaagtcacctgataagctacatgcacccaacccctcacaaaggagcagagctagcaggaactgtctttgtgctgagaacctcatgaatggcactgctaatgaccttagtggaggcagcaattgccaatgtcatccactgaactcctgcaagagtgacatacctttgcaatcaactacctcagttcccatgccgaactcacagagcattgagaaccagcccatgcccagcgttgaatgtactccagggagtaataaatttgatggacatgctataaaatctacctcagacggttgcctggcagtggcagtgactgcaacagccagttcctcagcagcacctttatcagatgcttcacacgtttcaaaacttgctaccagccctgtctgcagcgactcccccaaaacccttggcccaaaccctggtctcattttacaggccttgaccctttcgaacgccagcgatgggttcaatctggagcggctggagatgctaggagactccttccttaagcatgcaattaccacctacttgttttgtacctatcctgacgctcatgaaggccgtctttcctacatgagaagcaaaaaggttagtaattgcaatctgtaccgccttgggaagaagaagggcctccctagtcgaatggtggtttcaatttttgatccacctgtgaactggcttcctcctggatatgtggtgaatcaagacaaaagcagtacagacaagtgggattcagaagagaacaaagagaatccattagccaatggaagatctgaggaagactatgatgatgatgaggagggtgttgacgatgttgatgaagatgatgatgacctgatgtggaaggagccaaaagatgag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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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