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2024-04-27 23:02:20, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XR_009500979            4031 bp    RNA     linear   MAM 01-OCT-2023
DEFINITION  PREDICTED: Balaenoptera ricei NRDE-2, necessary for RNA
            interference, domain containing (NRDE2), transcript variant X2,
            misc_RNA.
ACCESSION   XR_009500979
VERSION     XR_009500979.1
DBLINK      BioProject: PRJNA1021953
KEYWORDS    RefSeq.
SOURCE      Balaenoptera ricei (Rice's whale)
  ORGANISM  Balaenoptera ricei
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha;
            Cetacea; Mysticeti; Balaenopteridae; Balaenoptera.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_082640) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_028023285.1-RS_2023_09
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 09/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4031
                     /organism="Balaenoptera ricei"
                     /mol_type="transcribed RNA"
                     /isolate="mBalRic1"
                     /specimen_voucher="NIST 3 NM17K954C"
                     /db_xref="taxon:2746895"
                     /chromosome="2"
                     /sex="female"
                     /tissue_type="muscle and kidney"
                     /dev_stage="calf"
                     /country="USA: Gulf of Mexico, San Destin, Florida"
                     /lat_lon="30.37 N 86.35 W"
                     /collection_date="2006-02-11"
                     /collected_by="Lydia Staggs"
     gene            1..4031
                     /gene="NRDE2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 9 Proteins"
                     /db_xref="GeneID:132359918"
     misc_RNA        1..4031
                     /gene="NRDE2"
                     /product="NRDE-2, necessary for RNA interference, domain
                     containing, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:132359918"
ORIGIN      
aaaaggcggtgcggcctgtgatcatggcgctgttccccgcctttgcgagtgttagtgaggtgcccgagagtgggagccccaggaaagaattagactggctgagcaacccaagcttttgtgttggaacggtaacatctctgggccaacaaactgaagaggccacagcctttgtttctgaagagtcgctactgaccaggagtcctctgaattcagagccttcagatgaaagtgacactaacagaaagcccaaacaaacaagcagaaaaaagaagaaagagaaaaagaagaaaaggaagcatcagcaccacaagaaaaccaagagaaaacgtgggcagtcaagtagcagtggatctgagtcatatactgattctgaaaaggacagatcttccacaagcatcagagacagtaaaaaggaatcagagaaaccgaatcaagaaaataatgccactgctgatattggacgtcactttgtttggcttgaggacattcaggctctgatgggagaaaccttcagaacagataagaagccggatcctgcaaactgggagtataagtctctttaccgaggagatgtagcaagatacaagaggaaaggagactcctgccttggcattaaccctaagaagcagtgtatatcttgggaggggacttccacagaaaagaagcggtcacacaagcatgtcgagcgctactttacaaagaagagtgtgggattaatgaacattgacggagttgccattagcagtaaaactgagcctgcctcatcggagtcgatctcatttatcccagtgaagggtgcagaggacgtggttgcccctgttaccacctggttgaaccctctggggatttatgatgaagccaccacgcagtggttacaaggccggggtccttcagagcaagaatccaagcagccagattcacagcccaacagagagaacgtgcttctcaaggccaaggtggaggagtttaacaggagggtatgggagaatcctcgggatgttcagctgtggatggcatttgttgcttttcaggacgaggtcatgagaagtccgggcctgtacgccattgaggaaggagagcaggaaaagcggaagcggtccctgaggctggttctggagaagaagctggccattctggaacgggccgtggaaagcaacccgagcagcgtggacctgaagctcgccaagctgcagctctgcaccgagttctgggagccctccactctggtcaaagagtggcagaaactgatatttttacatcccaacaacacagccctttggcagaaataccttttattttgccagagccagtttagcaccttttccatatcaaaaattcagagtctttatggaaaatgcttgagtactttgtctgctgttaaggacggcagcatcttgtcccaccctgagctgcctggcaccgaggaggccatgtttgccctctttcttcaacagtgccactttctgcggcaggctggtcactccgagaaggccatctctctgttccaggccatggttgacttcaccttcttcaaacccgacagtgtgaaagacctgcctaccaaaggacaggtagaattctttgagcccttttgggacagtggagagcccagggctggggagaagggcgcccgaggctggagagcgtggatgcaccagcaggagcggggcggctgggtggtcgtcagcccagatgatgacgatgatgaaccggaagacgacgaccaggaaattaaagataagactctgcccaggtggcagatctggcttgctgctgagcggtcccgagaccacagacactggcggccgtggcgccctgagaagaccaagaagcaggcggaggaagactgtgaggacccagagagacaggtgttgtttgatgatattggacagtctctgatccgactttccagcccggatcttcagtttcagctggttgcagcctttctgcagttcttgggtgtgccttccggcttcagccctccggcctcctgcctctatctggccatggatgagaacagcatctttgacaatggactctatgatgaaaagcccttgacttttctcaacctttcattttccggcgtcagctgtgtcggacgcacggaccagctgggttgccggcactggaccaggggtcacagtcgagagggcgaggagttcatccgcagcctcttccacctcgtgatgcctttgttttcaggcaaggagaggtctcagctctgcttctcctggttacagtacgagattgcaaaggtcgtttggtgtctgcacactaaaaacaagaagaggttaaaatcacaaggaaagaactgcaaaaaactagccaagaatctccttaaggagccagacaaccgcaacaatttttgcctctggaagcagtacgcgcatctggagtggttgctcggcaacacagaggatgccagaaaagttttcgatacagcactcggcatagcagggagcagagaactgaaggaccatgagctgtgtgagctcggtctcctctacgccgagctggaggtggagctgttgccggacgtgaggggggccgccccagcccgagccattcacgtattgaccggactgaccgagaatggggcctacgggccctacaccgggcaagtctcggccgttcacattttgaaagctcggaaggcttatgaacacgcgctgcaggactgtttgggggagagctgtgtctccgattcctttagccgcctgattagcctggttaaatgctttatgctcttccagtatttgaccctagggatcgacgctgctgtgcggatatatgagcaggtacttgcaaaacaccaggtctctgtttccgcagagggccctggtctggagggcagtgccagcccgcagagcctgagcagcgtcctcgaggccgtcaccctgacacacacgagcctgctcaggttccacgtgaaagtcgccgtctacccgctggctcctctgcgagacgctctctcggaggctttaaagttgtatccgggcaaccaggttctttggaggtcatatgtacagattcagaataagtcccacagtgccagtaagaccagaagattcttcgatgcgatcaccaggtctgccaaacccttggagccgtggttgtttgcaattgaagctgagaaaatgaggaaaagactagtggaaactgtgcagagggtagacggtagagaggtccacgccaccattcccgagaccggcctgacgcatcggatcagagccctgtttgaaaatgcgatgcggagtgactacggcagccagtgccccttactgtggaggatgtatttgaattttttggtttccttaggaaataaagaaagaagcaaaggtgtgttctacaaagcacttcagaattgtccttgggcaaaggtgctgtacctggatgccgtggagtacttccccgatgagatgcaggagatcctggacctgatgacggagaaggagctccgcgtgcgcctgccgctggaggagctggagcttctgcttgaggactagcgaccaggaggggagtggggcctgcctccgaggcctcggcgcctgccccgtgggagccaggagacaccagaagagacgctgctgttgaacaactgccaccagctctgggggtgtgacggggcagcaggtattgaagtctgcagtccttttggtcagccagcttccctaacaaacacccggatccaccgacttgctgctgctgagcggccggtgtggagggcccagaaacaggattcagtgtttgagagagagcacgctttattgggaagagagcagtgcacgcgacccacatacgaagagggctggatgggcctcctacccatcgtgctcagaaggtactcggggtgctgtgctagtgaagagcaaccggaacgtggactcctgggcaacttccccaacctcacacctctgagggggtcgacacactgccaaccttttcctggaaggcaactgtggtccactagagatagagcccctcaggggtgccttcttgttttttataaagaacattttctttagactttt
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]