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2026-11-11 16:01:46, GGRNA.v2 : RefSeq release 233 (Jan, 2026)

LOCUS       XR_009067182            5923 bp    RNA     linear   VRT 16-MAY-2024
DEFINITION  PREDICTED: Corythoichthys intestinalis dicer 1, ribonuclease type
            III (dicer1), transcript variant X5, misc_RNA.
ACCESSION   XR_009067182
VERSION     XR_009067182.1
DBLINK      BioProject: PRJNA989181
KEYWORDS    RefSeq.
SOURCE      Corythoichthys intestinalis (scribbled pipefish)
  ORGANISM  Corythoichthys intestinalis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei;
            Syngnathidae; Corythoichthys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_080409) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_030265065.1-RS_2024_05
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 05/15/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5923
                     /organism="Corythoichthys intestinalis"
                     /mol_type="transcribed RNA"
                     /isolate="RoL2023-P3"
                     /db_xref="taxon:161448"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="body"
                     /dev_stage="adult"
                     /geo_loc_name="Philippines"
     gene            1..5923
                     /gene="dicer1"
                     /note="dicer 1, ribonuclease type III; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:130931243"
     misc_RNA        1..5923
                     /gene="dicer1"
                     /product="dicer 1, ribonuclease type III, transcript
                     variant X5"
                     /db_xref="GeneID:130931243"
ORIGIN      
gaggcagtctaccgacgccgacaccatcttatgccatctagactcatatgtggtatcaaaggtgtaaaatgtgttcagcgcgaatgcgttacggagattcaccatgactttagtcgaatattgtaagtgtggaaatgcggtgtttacgcaatttacgtcatcgtttggtcgtagctaaggcccaattcacaggaaatgatcccacagtgacaagcggacacacaaattggtacagctgagtgaataagatagacggattcccaacaaaatattctggatccactgaacctgtaacaggcctgtccatggaagtgtaagaagttaagagatttaaaaatggatccaaggtcccatttctctctaaccaagtaacgttccagattactaccttgaatttgtgacaaacaacatgaaataaagtaaagcagaagggaggagttcttcccactctctccactttgaagaatggcaggcctgaagctcgttaccccggccacatcttccatgggtcctttttttggactgccatggcagcaggaggcaatccacgataacatctatacacctagaaaatatcaggtagaacttcttgaagcagcacttgaacataacactatcgtctgtttaaatactggctcagggaagacatttattgcagttctcctaacaaaagagctttcccatcaaatccgtggacaataccaaggaaatgcaaagaggactgtatttcttgtcaactcagccatgtctgctaatcagcaagcagctgcagtcaggactcactctgacctccaagtgggagagtacacagagatggaggagacgtcagtatggactaatcatcaatggagtgaagagatgaacaacaaccaggtgctggttatgacttgccatatatttctgcatgtactgaaaaatcagattttacccttgtcaaaaatcaacctggtggtttttgatgattgtcatcttgccatcacggatcacccctactgtgagataatgaagctttttgatgacaacaacggcagtcctcgtattcttggtctcacagcctccattctcaatggcaattgcgaccccacagatcttgagcagaaaatccagaatttagagcaagtcctgaagagcaacgctgaaactgccactgaccttgtagttcttgacagatatgcctcccagccaagagaggtggtgctggactgtggcccttatctagataagaatggactctcctcacgtctccaagtggagttagatgaagcgctcgacttcttgaatgagtgtaacatatcgattgcaagagaagataagggtcctacagtcatctcacggcagatcttaagtgactgcagggctgtgctgcaggtgcttgggccctggtgtgcagataaagcagcaggtatcatggtgcgcgagcttcagaagtacatcaagcacgaacagggggcaattaaccgcaagtttctactgttcactgacaccattctcagaaaagtacatgccctttgtgaggaacatttttctccagcctccctggacctgaagtttgtcacacctaaggtactccgtctcttggagatcctgcatgaatacaagccctttgagaggcagcagtttgagagtgtggagtggtacaacaaccggaaccaagacaactatgtttcttggagtgattctgaagaggaagatgacgatgaagagtcagagaccaaggaaaggcctgaagccaactttccttcaccattcactaacattctatgtggaattatttttgtggagaggcgttacactgcagtcgtcctgaatcgtctgatcaaagaggcaggaaaacaggacccagagctggcttacatcagcaacaacttcatcactggccatagcattggcaagaaccagccacggaacaagcagatggaggtggaattcagaaagcaagaggaggtcctacgcaaattccgggctcatgaaaccaacctgctgattgccacaagcattgtggaagaaggtgtggacattccgaagtgtaacttggtggtgcggtttgacttgccaactgaatacaggtcctacgtccagtccaaaggcagagctcgagctcctgtctccaactatgttatgctggctgatagtgagaagaccaaatgctttgaaagtgatctcactacctacaaggcaatagaaaagatcttgaggaacaagtgctccaagtctgcagaagttgatgagtttgaaattgagcacgtgttagatgatgacaacatacttcctccgtacgtgcttcgatcggaggatggaggtcctcgggttaccatcaatacggccatcggacacattaacagatattgtgctcggctgcccagtgatccctttacccacttggctcccaaatgtaaaactagggagatgcaagatggaagattccagtccacactctatttacccatcaactccccactcagggttcctgttaagggtcccaacatgaattgtgccagattagcagagaaagcagttgcattactttgttgtgagaaactacatcaaataggtgaactggatgatcatttgatgcccgtcgggaaggagactgtcaagtatgaggaagagctggatcttcatgatgaagaggaaacttgcgtccctggccgaccgggctcaacgaagaggagacagtgttatcctaaagctataccagagtgtttgcaggagagttatgctgtacctgagcatacttactacctatatgtgattgggatgaacctcactacgccacttcctgacgagctcaacttccgcagaaggaagctttacccaccagaggacagcacacgctgttttggcatcctgactgctaaaccgataccacgagtcccacatttcccggtctacacacgctcgggtgaggtgaccatctccatcgagcttctcaagtccggcttcaatctcaccgccacagagctcgacctaatcattcgcctgcaccagtacatcttctcgcatattctccgcctcgagaaacctgcactagagttcaagcctacacttgccgattctgcttactgtgttctacctcttaatgttgttggagattctaacacactcgatatggacttcaaattcatggaggatatcgaaaagtctgaagcccgaactggtattcctaatactcattataccaaacagaaccccttcacctttaaattggaggattaccaggatgctgttatcattcctaggtaccgtaatttcgaccagcctcatcgattttacgtcgctgatgtatatacagaccttactcctctcagcaagtttccttcaccagaatacgagacatttgctgagtactacaaaaccaaatacaacctggatctgtccaacctgaaccagcctctactggatgttgaccatacgtcatcgagactgaatctcttaacgcctcgtcacctcaaccaaaaaggcaaagcgttgcccctcagcagtgcggagaagaggaaagcaaaatgggaaagtctgcagaacaaacagatcctggttccagaactttgtgccattcaccccatccctgcctccctttggaggaaggcggtgtgtttacccagtatcctctaccgtctccattgcctcctgacagcagaggaactaagatcccagacagccagcgaagctggagttggatcacaaatccttcctactgatttcagtgtgacgtaggctccaggaggcagcagaagacatagcggaccatagcagcaccagcgattctgatatttccagcgaaagtagcccctcaggatcgttgtttcgtggcgaggggtcccaggaaagactgtatacaataactccttacatgtttgaacctgaggtgtcagatgacgatttacacagcacatcagacggtggtgatgacgcagactggcgacttgacacatcacgtaaggaggagtggtgtagctgtaaaccactgtcaagtaatgaaccttccaagagaatgcctttgccgtcaggagatcccagaagtgagaggcaaacttgaggaggtagaagcactgacggatacattgccggagtgcattttggatcaccctggcctgaatgccatttgtttcaacccttgggcccttcagtttgcatgggccaggtacaagcaactgtatggtggcaaggcatttgaggggcccacggatgccaaatttagacatgtcacctacagacaatttgtcacctggtgctgggagtatctaggcaaagacattagagtggtactcccctcatgttttgtgtcttccatcagggcacacttccctcctcctggtctagaagaagattttgtgtttacagggctcaaactaccaccattgaagaagtaaaacaataaattgtaatattttgatgactgtttaatgcatttatcctttttttttttcaacattatattccacaaaaacaaaacaatagtaacggtgacaacagcaaacaatgattccacatttatgttggcctgataaaactgaattgacagcatcagctttcactggtttcacgtacaagtcgctgagtggtcggggctcatcttcccttgatggtgccttatgccttggcttttgcagcaccaactccatcaaattattgaaacattattaattaattaattaattaattaattattagacatacactggaaacgaaaacaaaattcattcattcattcattttaaaataaataggaaaataattgcaggtgtttttggcagattgtgacataacaatggcataaacttgacataaatttagtaagcagcacaaagttactatggcaacagactttttgcagcgttgaaaaatgataaaggcgagagacacagtttagtgtgagttacatgcatttgaaattgaaatacttatcctgatcaacctgcacacaaaatgagaaaataaatattttcaaagaataaatgtcataaatttcattattgtatgtttacttacagtgcctaggttttaccaacacatttgtcaatgaaaaacctcccttcttgtacttggggaatataatgctataccgccgttcccctgcttttgttaaagccctaggtcttccagcattcttgttataatgaagggcaaatcttctatctccaaatcctggagatagaaaatttaaaattaacaatcacaaatacttggctaaattttcaaatgttcatgtgtataattttatttaatcattacggacctactgtgcattcctcgatatgagaaccggaacatcttgggggcaaattcattaacaaggctgtgaaaggcctcaagtccactagtctgaccaagagcagacatgctgcaaacatctttgacaaagtgcttcttggtcagaatatcaacaagtctttcacaagcctcacttcctgaaaaaacatacgtaatgaacaaatgaaaaggtgtatatactacatgtgaaagcagtggattcagaggacagggttaaattgaggtaagtgattcgctgtggtgacccctaaagggaaatgccaaaagaaaagaattgatcattatcatttatttcacctcatgagtgaattattacctggtttgagccattttttctctctccaaaggaccatgataacagtagtcatgtatattttggatatgttcaacaccagacaaccacttcctcttgatgtcttcatcacccggtgttgaagatgcaacacaccaatacaggtggttggcaatgctcttgatccaatccttgattatactggaggaggttttgccagtgcatctaatctttttagtcagacctaaaaatgagaaggtctgtgctcaaaaatggtcaaacctttcattgcaaaattgaatgtgctcgaaacctaccaaccgttcactacatgctagcagtcataataatgtgaaatct
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]