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2024-04-28 00:02:32, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XR_004244600            7148 bp    RNA     linear   PRI 26-JUL-2023
DEFINITION  PREDICTED: Hylobates moloch NRDE-2, necessary for RNA interference,
            domain containing (NRDE2), transcript variant X5, misc_RNA.
ACCESSION   XR_004244600
VERSION     XR_004244600.2
DBLINK      BioProject: PRJNA600985
KEYWORDS    RefSeq.
SOURCE      Hylobates moloch (silvery gibbon)
  ORGANISM  Hylobates moloch
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hylobatidae; Hylobates.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026652291) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jul 26, 2023 this sequence version replaced XR_004244600.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_009828535.3-RS_2023_07
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 07/21/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7148
                     /organism="Hylobates moloch"
                     /mol_type="transcribed RNA"
                     /isolate="HMO894"
                     /isolation_source="EBV transformed lymphoblastoid cell
                     line"
                     /db_xref="taxon:81572"
                     /chromosome="Unknown"
                     /sex="male"
                     /note="Lionel"
     gene            1..7148
                     /gene="NRDE2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 6 Proteins"
                     /db_xref="GeneID:116456294"
     misc_RNA        1..7148
                     /gene="NRDE2"
                     /product="NRDE-2, necessary for RNA interference, domain
                     containing, transcript variant X5"
                     /db_xref="GeneID:116456294"
ORIGIN      
ccgcttcggggtcaagccccagagagcgccgcgaaaaccacatttcccagagtgcaccgcgacggcaggggtcctcagacaggcgctcgctcgccggcgccatctctataaagaagaacggcggtgcggcctgtggtcatggcgctattcccagcgtttgcggggcttagtgaggctcccgatggcgggagctccaggaaagagttagactggctgagcaacccaagcttttgtgttggatccataacgtccctgagccaacaaactgaagcagccccagcccatgtttctgaagggccaccgctgacgaggagtcacctgaaatcagagtcttcagatgaaagtgacactaacaaaaagctcaaacaaacaagcagaaaaaagaagaaagagaaaaagaaaaaaaagaagcatcagcatcataagaaaacaaagaggaagcatgggccatcgagtagcagcaggtctgagacagacaccgattctgaaaaggacaaaccttccagaggcgtcggaggcagtaaaaaggaatctgagaaaccgaatcaaggaaataatgctgcagctgatactggacatcgctttgtttggcttgaggacattcaggctgtgacgggagaaaccttcagaacagataagaaaccagatcctgcgaactgggagtacaagtctctctaccgaggggatatagcaagatacaagaggaaaggagactcctgccttggcattaaccctaagaagcagtgcatatcttgggaagggacttccacagagaagaagcattcacgcaagcaggttgaacgctattttactaagaagagtgtgggattaatgaacattgatggagttgccattagcagtaaaactgaacctcccttatctgagcccatctcctttataccagtgaaggacttggaagatgcggcttctgttacaacctggttgaatcctctggggatttatgatcagtcaaccacacagtggctacaaggacagggtcctccagagcaggaatcaaagcagccagacgcacagccagacagcgagagtgcggctctcaaggccaaggtggaggagtttaacaggagggtgcgggagaatcctcgggatacgcagctgtggatggcattcgttgcttttcaggacgaggtcatgaaaagtcctggcctgtatgccatcgaggaaggagagcaggaaaagcgaaagaggtccctgaagctcattctggagaagaagctggccattctggagcgggccattgagagcaaccagagcagtgtggatctgaaactggccaagctgaagctctgcacagagttctgggagccctccactctggtcaaagagtggcagaaactgatatttttgcatcccaataatacagccctttggcagaaataccttttattttgccagagccagtttagtaccttttcgatatcaaaaattcacagcctttatggaaaatgcttgagcactttgtctgctgttaaggatggcagcatcttatctcaccctgcgttgcctggcacggaagaggccatgtttgcactctttcttcagcagtgccactttctgcggcaggctggccactctgagaaggccgtctcattgttccaggccatggtggacttcaccttcttcaaacccgacagcgtgaaagatctgcctaccaaaggacaggtggaattctttgagcccttttgggacagtggagagccccgggctggggagaagggagcccgaggctggaaggcgtggatgcaccagcaggaacgaggtggctgggtggtcatcaacccagatgaggatgacgatgaaccagaagaggacgaccaggaaataaaagataagactctgcccaggtggcagatctggcttgctgctgagcgttcccgagatcagaggcactggcggccctggcgccctgataagaccaagaagcaaactgaggaagactgtgaggatcccgagagacaggtgttgtttgatgatattgggcagtctttgatcagactttccagccacgatcttcagttccagctggtggaggccttcctgcagttcttgggtgtgccttctggctttactcctccagcttcctgtctttatctggccatggatgagaacagcatctttgataatgaactttatgatgaaaagcccttgacttttttcaacccttcgttttctggggctagctgtgttggtcgcttggataggttaggctgtcctcgctggaccaggagtcagaaccgagagggcgaggagttcatccgcaatgtcttccaccttgtcatgcccttgttttcaggcaaagagaagtcccagctctgcttctcctggttacagtatgagattgcaaaggtcatttggtgcctgcacactaaaaacaagaagagattaaagtcacaagggaagaactgcaaaaaactagccaagaatctccttaaggagccagaaaactgcaacaacttttgcctgtggaagcagtatgcacatctggagtggttgcttggcaacacagaggatgccagaaaagtttttgacacagcactcggcatggcaggaagcagagaactgaaagactctgacctctgtgagctcagtctgctctatgctgagctggaggtggagctgtcgccagaagtgagaggggctgccacagcccgagctgttcacatattaaccaagctgactgagagcagcccctatgggccctacactggacaggtgttggctgttcacattttgaaagcgcgaaaggcttacgagcacgcgctgcaggactgtttgggtgacagctgtgtctctgatccagctcccaccgattcctgtagccgcctaattagcctggctaaatgcttcatgctcttccagtatttgaccatagggattgatgctgctgtgcggatatacgaacaggtgtttgcaaaactgaacagttctgttttcccagaaggctctggcgaggggtacagtgccagctcccagagttggaccagtgttctcgaagccatcacactgatgcacacgagcctgctgagattccacatgaaagtgagtgtttacccactggcccctctgcgagaggcactctcacaggctttaaagttgtatccgggcaaccaggttctttggaggtcctatgtacagattcagaataagtcccacagtgccagcaagaccaggagattttttgacacaatcacgaggtctgccaaacccttggagccttggttgtttgcaattgaagctgagaaactgaggaagagactggtggaaactgtccagaggttagacggtagagagatccatgccacaattcctgagaccggcttaatgcatcggatccaagccctgtttgaaaatgccctgtgcagcgacagtggcagccagtgccccttgctgtggaggatgtatttgaactttctggtttccttgggaaataaagaaagaagcaaaggtatattctacaaagcacttcagaattgtccttgggcaaaggtgttgtacctggatgctgtggagtacttccccgatgagatgcaggagatcctggacctgatgactgagaaggagctccgggtgcgcctgccgctggaggagctagagctgctgctggaggattagagagcagcgggggaatgggctgtgcctgcgaggccaagttgcccaccctgcggagctaggaggcgcgagcggagaacggaaacaaccctcaacttgaggaagttgagagctcgactccaaggtggacttgctccccctccccgagagctgactggcttgaactgtcatgagttcctggctgcccacaatgagggaccttctccacccttgtcctctgcgcggggcggacatcagccagatacatcacagacctgattgggggcagggagtaaggaagtccaggaccaaaccatgctccccatgacggcagctggcgcctcagtccccatctgactcatgtttcttctcatctggttcagaacttagaagggcgtggcctctgatcagctggtcccctcaaaccccagtggcaacctgtcccttgagagccaggaatggctcttagcagtgggcagtgagcccccgagaggataaagcggctgctcgaacagattgcgagcacattacttgctgcatgggaagaggcttaaaacaaatcaaagattctttaagggcattttacagaaaccaagatgtcgagagcatcactgttatttaaaagcctgtttgaggccgggcgcggtggctcacgtctgtgatcccagcactttcggaggctgaggcgcatggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaacccccgtctctactaaaaatacaaaaaattagccaggcgtggtggcgggcgcctgtagtcccagctgctcggaaggctaaggcaggagaatggtgtgaacctgggaggcagagcttgcagtgagccaagatcacgccactgcactccagcctgggcgacacagcgagactccgtctccaaaataaaaaaaaagcctgtttgagattgctgacatgaagttctgaaagacgactacgtgcctcccaagactaactgtcagctcagagggctgagaagggggttctgagctcaagtcaaacagtggctcatgcgtttcatcagtaacgctcgtcatttccccaaaggagtcactgatcacgtcagaccgcaggggtcggcccacctcaggtttgggacagtgttctttcctggaatgaagcagtggcaatgcctctggcacaggattgctgggcctgcgggaggccgggaggtacctctgtgctatgtccccagttggaggaggcagctactgcttgtaaggcacgcatattattttgcattggaaaagtgaagatgggcttgctgcagagggagtgatggcagagttcaccttgaatggttctactgaggaagggctccaaagagccagtgggttttccgcaggcagacggggctctccctgtctggctcaccagtgcaggaagccagggaagaaattactgtgggaattctgttatttcacaagcacttcatccctgcatccctgcacttggcaccgcaggcctcagtgaccagctgccgaaacggtaatttcagcattttggtcaataagcaaactggagaagcagctggggtggggtgcagttcagcccgctaccctgacactctaggccctggcatttgctttagctgcttttgtagaattgacatgagggagactgtccctctagaggaaaaggctcagctattaccaatgaggaaaaggcaatactgatgtgctagggttttttgttttttttaaatctcaaacttacggaaaagatgcaagtgcgttacaaagaattttgtttcctgaaccatgtgagtcagttgctgatagtctgctacccgtccacgatacagacactgaacaggaagtcagcatggacacagtactcccagcgggtcctcaggcctggccatgtcctctaggaaaaggatcccgttcaggagcaggagctgcacttggttgtcatctctttggtctccttctgattggaagctttttgacttccaagacgtggatacttttgaagtgttctgaatttgtagaatgttcctcagtttgtgtttgcctggtgtttcctcatcactggattcaggctaagcatctttggcaggagtgtgacagcactgacactcttgggtggcacgtactttcaaagtgcccattactgatgtgcattttgaccacttggtgaagacagtgtgtgctgggcctctccagtgtgactttccctttctaactgaacagtgttttgtgggagactctcaaaatctgtaagtaccccttcctcagcaaactttcagatcaattcgtatgtattggtgtgtgtgcagttccctatttaaagggctgtactgtattccattaacagttaactgttaggatgctcagattgtcccaggtttggccagtggaagcccctacacacaggctttggtgtcctttggacatgtccctatcattccttgagcactcccttgctttctggcaaaacagattttgggttcatcttgtcctttccctgcctagccctgaaatcattcctcactccttttagtattagtggagaataatacttagcagcaaaggtctgggtctaggggtgctcgctgcagttggggtgtcactgttcccaggcgctcccagtggacagaggtcgttctcgttttcttctttctgtgtctaactcctcagagaaacctggctcccaccgtcctgtttacctacctgactgcctccatacataagcagcctccctcccctgccacctccctcccctgccacctccctcccctgccacctccttcccctgccaccactccatccctgcagatgccttcctcacccacttgggctctcatactgcacatcaggctgcccacactgactccccgtatcagaccaccccagccctgcacgtacaccccacacggatgccagcctcaccctgcccatgctgagtccctgtgctgtggtgttcctccacatggacagctccacaccctgcactgggccacccccacgtgtggatgtcctcggtggtaggcagagtggcgcccctaaagatggccacaccctaagccctggaacatgtgactgttacatggcaaaaggaactttgcagataaaaattaagattgtaaactttaaaacagggaaattatcctggattatttgcacaggtccaatgtaatcaatcacaagggtccataagagtagaaaaggcaggcagaaagaagcatcagtgggagagaaggactgggcctgctgctgctggtggaagatgaagggccacgagtcaggagggagggtggccttcacagactggcaaaggcctcagctggcagccagcaaggaaatgctgacctcggccggccccacaactccaggaaattaaattctgccaacaaccctcagcaaggaagcagaatctcccttagagacgccagagaacagtcctgccaacagcaagactttagcctggagacacccgtgttggacttctgacctacagaactgaggtaaaattgtggtttttatttatttattcttttt
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]