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2025-08-29 17:18:27, GGRNA.v2 : RefSeq release 231 (Jul, 2025)

LOCUS       XR_003682141            3753 bp    RNA     linear   MAM 10-JAN-2025
DEFINITION  PREDICTED: Physeter macrocephalus NRDE-2, necessary for RNA
            interference, domain containing (NRDE2), transcript variant X1,
            misc_RNA.
ACCESSION   XR_003682141
VERSION     XR_003682141.2
DBLINK      BioProject: PRJNA434122
KEYWORDS    RefSeq.
SOURCE      Physeter macrocephalus (sperm whale)
  ORGANISM  Physeter macrocephalus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha;
            Cetacea; Odontoceti; Physeteridae; Physeter.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_041224.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 14, 2023 this sequence version replaced XR_003682141.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_002837175.3-RS_2025_01
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 01/08/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3753
                     /organism="Physeter macrocephalus"
                     /mol_type="transcribed RNA"
                     /isolate="SW-GA"
                     /db_xref="taxon:9755"
                     /chromosome="11"
                     /sex="female"
                     /tissue_type="muscle"
                     /dev_stage="adult"
     gene            1..3753
                     /gene="NRDE2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 8 Proteins"
                     /db_xref="GeneID:102976275"
     misc_RNA        1..3753
                     /gene="NRDE2"
                     /product="NRDE-2, necessary for RNA interference, domain
                     containing, transcript variant X1"
                     /db_xref="GeneID:102976275"
ORIGIN      
aaaaggcggtgcggcctgttatcatggcgctgttccccgcctttgcgggtgttagtgaggcgcccgagagcgggagccccaggaaagaattagactggctgagcaacccaagcttttgtgttggaaccataacatctctgagccaacaaactgaagaggccacagcctttgcttctgaagagtcgctactgaccaggagtcctctgaagtcagagccttcagatgaaagtgacactaacaaaaagcccaaacaaacaagcagaaaaaagaagaaagagaaaaagaagaaaaggaagcatcagcaccacaagaaaaccaagagtaaacgtgggcagtccagtagcagtggatctgagtcatatactgattctgaaaaggacagatcttgcggaaacatcagaggcagtaaaaaggaatcagagaaaccgaatcaagaaaataatgccactgctgatattggacgtcactttgtttggcttgaggacattcaggctctgacgggagaaaccttcagaacagataagaagccggatcctgcaaactgggagtataagtctctttaccgaggagatgtagcaagatacaagaggaaaggagactcctgccttggcattaaccctaagaagcagtgtatatcttgggaggggacttccacagaaaagaagcggtcacacaagcatgtcgagcgctactttacaaagaagagtgtgggattaatgagcattaacggagttgccattagcagtaaaactgaacctccctcatcggagtcgatctcatttatcccagtgaagggtgcagaggatgtggtttcccctgttacaagctggttgaaccctctggggatttatgatgaagccaccacgcagtggttacaaggccggggtccttcagagcaggaatccaagcagcccggttcacagcccgacagagagaacgtgcttctcaaggccaaggtggaggagtttaacaggagggtttgggagaatcctcgagatattcagctgtggatggcatttgttgcttttcaggacgaggtcatgagaagtccgggcctgtacgccatcgaggaaggagagcaggaaaagcagaagcggtccctgaggctggttctggagaagaagctggccattctggaacgggccgtggaaagcaacccgagcagcgtggatctgaaacttgccaagctgcagctctgcgccgagttctgggagccctccactctggtcaaagagtggcagaaactgatatttttacatcccaacaatacagccctttggcagaaataccttttattttgccagagccagtttagcaccttttccatatcaaaaattcagagtctttatggaaaatgcttgagtactttgtctgctgttaaggacggcagcatcttgtctcaccctgagctgcctggcactgaggaggccatgtttgccctctttcttcagcagtgccactttctgcggcaggctggtcactccgagaaggccgtctctctgttccaggccctggttgacttcaccttcttcaaacccgacagtgtgaaagacctgcctaccaaaggacaggtcgaattctttgagcccttttgggacagtggagagcccagggccggggagaagggcgcccgaggctggagagcgtggatgcagcagcaggagcggggcggctgggtggtcgtcagcccagatgatgacgatgatgaaccagaagacgaggaccaggaaattaaagataagactctgcccaggtggcagatctggcttgctgctgagcggtcccgagaccacagacactggcggccgtggcgccctgagaagaccaagaagcaggcggaggaagactgtgaggacccagagaggcaggtgttgtttgatgatattggacagtctctgatccgactttccagcccggatcttcagtttcggctgattgcagcctttctgcagttcttgggtgtgccttccggcttcagccctccggcctcctgcctctatctggccatggatgagaacagcatctttgacaatggactttatgatgaaaagcccttgacttttctcagcctttcattttccggcgtcagctgtgtcggacgcacggaccagctgggttgccggcactggaccaggggtcacagtcgagagggcgaggagttcatccgcagcatcttccacctcgtgatgcctttgttttcaggcaaggagaggtctcagctctgcttctcctggttacggtacgagattgcaaaggtcgtttggtgtctgcacactaaaaacaagaagagattaaaatcacaaggaaagaactgcaaaaaactagccaagaatctccttaaggagccagacaaccgcaacaactttggcctctggaagcagtatgcacatctggagtggctgctcggcaacacagaggacgccagaagagttttcgatacagcgctcagcatagcagggagcagagaactgaaggaccatgagctgtgtgagctcggtctcctctacgccgagctggaggtggagctgttgccggacgtgagaggggccgcctcagcccgagccattcatgtattgaccagactgaccgagaacggggcctacgggccctacaccgggcaagtcttggccgttcacattttgaaagctcggaaggcttatgaacacgcgctgcaggactgtttgggggagagctgtgtctccgatccagctcccgccgattcctttagccgcctgattagcctggttaaatgctttatgctcttccagtatttgaccatagggatcgacgctgctgtgcggatatatgagcaggtatttgcgaaacacaagatctctgtttccgcagagggccctggcctggagggcagtgccagcccccagaacctgagcggtgtcctcgaggccgtcaccctgatgcacacgagcctgctcagattccacatgaaagtcgccgtctaccctctggcgcctctgcgagaggctctctcggaggctttaaagttgtatccgggcaaccaggttctttggaggtcgtatgtacagattcagaataagtcccacagtgccagtaagaccagaagattcttcgatgcgatcaccaggtctgccaaacccttggagccgtggttgtttgcaattgaagctgagaaaatgaggaaaagactagtggaaacggtgcagagggtagatggtagagaggtctacgccaccattcctgagaccggcctgacgcatcggatcagagccctatttgaaaatgcgatgcggagtgactacggcagccagtgccccttactgtggaggatgtacttgaattttttggtttccttaggaaataaagaaagaagcaaaggtgtgttctacaaagcacttcagaattgtccttgggcaaaggtgctgtacctggatgccgtggagtacttccccgatgagatgcaggagatcctggacctgatgacggagaaggagctccgggtgcgcctgccgctggaggagctggagcttctgctcgaggactagagaccaggaggggagtggggcgtgtctccggggcctccgcgcctgccccgtgggagccaggagataccagacgagacggtgacacatgcgtctgctgttgaacaactgccaccagctctgggggtgtgacggggcagcaggtattaaagtctgcagtccttttggtcagccagcttccttaacacccggatcccccgacttcctgctactgagcggccggtgtggagggccc
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]