LOCUS       XM_767919               2721 bp    mRNA    linear   PLN 13-SEP-2023
DEFINITION  Cryptococcus neoformans var. neoformans B-3501A hypothetical
            protein (CNBJ2880), partial mRNA.
ACCESSION   XM_767919
VERSION     XM_767919.1
DBLINK      BioProject: PRJNA19119
            BioSample: SAMN02953604
KEYWORDS    RefSeq.
SOURCE      Cryptococcus neoformans var. neoformans B-3501A
  ORGANISM  Cryptococcus neoformans var. neoformans B-3501A
            Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina;
            Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus;
            Cryptococcus neoformans species complex.
REFERENCE   1  (bases 1 to 2721)
  AUTHORS   Fung,E., Hyman,R.W., Rowley,D., Bruno,D., Miranda,M., Fukushima,M.,
            Wickes,B.L., Fu,J. and Davis,R.W.
  TITLE     Cryptococcus neoformans serotype D sequencing
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2721)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-SEP-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 2721)
  AUTHORS   Fung,E., Hyman,R.W., Rowley,D., Bruno,D., Miranda,M., Fukushima,M.,
            Wickes,B.L., Fu,J. and Davis,R.W.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUL-2004) Stanford Genome Technology Center, 855
            California Avenue, Palo Alto, CA 94304, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_009186).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..2721
                     /organism="Cryptococcus neoformans var. neoformans
                     B-3501A"
                     /mol_type="mRNA"
                     /strain="B-3501A"
                     /variety="neoformans"
                     /serotype="D"
                     /db_xref="taxon:283643"
                     /chromosome="10"
                     /note="lacks telomere sequence"
     gene            <1..>2721
                     /locus_tag="CNBJ2880"
                     /db_xref="GeneID:4938631"
     CDS             1..2721
                     /locus_tag="CNBJ2880"
                     /note="Match to ESTs gb|CF193379.1|CF193379,
                     gb|CF193378.1|CF193378; HMMPfam hit to PAZ, PAZ domain,
                     score: 68.7, E(): 1.5e-17; HMMPfam hit to Piwi, Piwi
                     domain, score: 318.9, E(): 7.2e-93"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="XP_773012.1"
                     /db_xref="GeneID:4938631"
                     /translation="

MAVNAPPSIGLETLDGCPIRPGFGTSGKAINVFANMFAARFDKSDAVVYHYDIEINPVVKTKEAKKPRPLLQKIWDQMVQEATGPLKTALESAAFDQQKNFYTPHVLDLKDGKLEIIVGLKEDGIVPTDDRRRFKAVIQAADNCQIDLDTIISYSKGDKQTEQTRDVMLRAVQSVNVLLRQDAAKRFSMHGAAGRKFFTEEDGVAISGGAVVYRGFKQSFRWTSSGYPAVQLDNATSAFIEPGMLVDVAPKILGLAGAGGGRGGRGGRGGPRGGFHGGAPGPVRPIQELNPLQIRKLSDLLRSAKFTVTHRKTERIFAIARLTSQPAEGIKFTLNGKDGQPDRTVSVAQYFQEQYNIKVTRPRLPCIQYGKNFVPMEFVRLEPFNAIPMMKITPDQTAEIIKEAAKPPSLRQGSIQGWRQKLNYENLPKLKAWHLQVQTQMMSVPARVLAPPAINYAGNQSLRANFGGWNLKGVKFNKAGKPLTSWAVVSFDERCTVPDLQKFINYFTGVLVQYGCPVQNRRPALLQLNPNAGGPNMGVKPALQQAAKAAFADSKVNPQIILCILPRKEASIYQTIKSVGAEGLFKPVVTQCLQSAKIKSDRGIDQYCGNVAMKVHCKLGGVTHQVKHNVDKTTMLCGADVTHPPSRGRVLYPSIAATVASINGENNYFAGCVTEQGGRVEIIQLLDEMITHHIKTFEKNTGAKPQKILFYRDGVSEGQYRFCVDEELQSIKKACKALGGNYNPKITFVICAKRHAMRFFAASDADRDRTGNLPPGTVVDRGVTSPHNFDFYLQAHAGLQGTAKPTHYVVMADEAGYTADALQNLTNTLCYSFARATRSVSLVPMAYYADIIAEQARLISYNEDLETATTAPSSTSGKLETVAFDPHRHFKRQFVGSDFGFTGWFM"

     misc_feature    574..723
                     /locus_tag="CNBJ2880"
                     /note="Argonaute linker 1 domain; Region: ArgoL1;
                     pfam08699"
                     /db_xref="CDD:430160"
     misc_feature    847..1143
                     /locus_tag="CNBJ2880"
                     /note="PAZ domain, argonaute_like subfamily. Argonaute is
                     part of the RNA-induced silencing complex (RISC), and is
                     an endonuclease that plays a key role in the RNA
                     interference pathway. The PAZ domain has been named after
                     the proteins Piwi,Argonaut, and Zwille; Region:
                     PAZ_argonaute_like; cd02846"
                     /db_xref="CDD:239212"
     misc_feature    order(949..951,994..996,1039..1041,1051..1053,1105..1107,
                     1114..1116,1120..1122)
                     /locus_tag="CNBJ2880"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239212"
     misc_feature    1282..2571
                     /locus_tag="CNBJ2880"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; Region:
                     Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(1717..1719,1729..1731,1771..1782,1789..1791,
                     1819..1821,1828..1830,1840..1842,1852..1854)
                     /locus_tag="CNBJ2880"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     misc_feature    order(1918..1920,1924..1926,2137..2139,2548..2550)
                     /locus_tag="CNBJ2880"
                     /note="active site"
                     /db_xref="CDD:240015"
ORIGIN      

atggctgttaatgctccccccagcatcgggcttgagactctcgatggctgccccattcgtcctggcttcggtacgtccggtaaggctatcaacgtcttcgcgaacatgttcgctgctcgcttcgacaagtccgacgctgtcgtctatcattacgacatcgaaatcaatcccgtggtgaaaaccaaggaggccaagaagccaaggccacttctccagaagatctgggaccaaatggtccaagaagccactggcccccttaaaactgcgcttgaatccgctgcctttgaccagcagaagaacttctacactcctcacgttcttgatctgaaggatggaaagttggagatcatcgttggtctcaaggaggatggtattgtccctaccgacgatagacgtcggttcaaggccgttattcaggctgccgacaattgccaaattgacttggacactatcatcagctactccaaaggcgacaagcaaaccgagcagactcgtgacgttatgcttcgtgctgtccaatctgttaacgttctccttcggcaggacgctgctaagcgcttctccatgcatggtgcagctggccgaaagttcttcaccgaggaggacggtgtcgctatctcgggcggcgctgtcgtctacaggggtttcaagcaatccttccgttggacttcttcgggctatcccgctgtccaacttgacaatgctacttctgcctttatcgagcctggaatgctcgtcgatgttgcccccaagatcctcggtcttgcgggcgctggtggtggtcggggtggtcgaggtggccgtggcggtcctcgtggtggcttccatggcggagctcccggtcccgttcgccctattcaagaactcaatccgcttcagatcaggaagctaagcgacttgttgagaagtgccaagttcaccgttacccaccgaaagactgaacgcatctttgccattgcccgccttacttcccagccagccgaaggtatcaagtttactcttaacgggaaggacggtcaacccgaccgcaccgtttctgttgctcagtacttccaggaacagtataacatcaaggtcacccgtcctcgacttccttgtatccagtacggcaagaactttgtgcctatggagtttgtcaggcttgagcctttcaacgctattcctatgatgaagatcactcccgaccagacggcagaaatcatcaaggaagctgctaaaccccctagccttcggcagggctccatccaaggctggagacagaagctcaactatgaaaatcttcccaagctcaaggcttggcacctccaggtgcaaacccaaatgatgagcgtccctgcccgtgtgcttgcccctcctgccatcaactatgccggtaaccagtccttgagagccaactttgggggctggaatcttaagggtgtcaagttcaacaaggccggcaaacctcttacttcttgggctgtcgtatctttcgacgagcgatgcactgtcccagaccttcaaaaattcatcaattactttaccggcgtactcgtgcagtacggatgtcccgtgcaaaacaggcgccctgctctgttgcagcttaatcccaacgcaggcggacctaacatgggagtcaagcctgctctccaacaagctgccaaggctgcgttcgccgattcaaaggtcaaccctcaaatcattctttgtatcctccccagaaaggaggccagcatctaccagactatcaagtctgttggtgctgaaggccttttcaagcctgttgtgactcaatgtttacagtctgcgaaaatcaagagtgaccgaggcattgaccaatactgtggtaatgtcgcgatgaaagttcattgcaagcttggtggtgtcactcaccaggtcaagcacaatgtcgacaagactactatgctttgcggtgccgatgtcacgcatcctccttcccgtggacgagttctttacccgtctatcgctgctactgttgcttccatcaatggcgagaacaattactttgctggttgtgtcactgaacagggcggtcgagtcgagatcatccagctccttgacgagatgatcacacaccacatcaagacatttgagaagaacactggagccaagcctcaaaagattcttttctaccgggatggtgtttctgaaggccaataccgcttctgtgttgacgaggagctccagtcaattaagaaggcttgcaaggctcttggcggcaattacaatccaaagattacctttgtcatctgtgctaagcgtcacgccatgaggttctttgcagctagcgacgccgacagggatagaactggcaacttgccacctggcactgttgtcgataggggcgttacgtcgccacacaactttgacttttacttacaagctcatgccggtctgcaaggcaccgctaaacccacccattacgtcgttatggctgacgaagctggttatactgccgatgcgctacaaaatcttactaataccctgtgttactcctttgcgagagcgactcggtctgtctcccttgtgcccatggcgtactacgccgatattattgcagagcaggcgaggcttattagctacaatgaggatctggaaactgcgacgacagctccttctagtacttcgggcaaactcgagacggttgcgttcgatccccatagacactttaaaaggcaattcgttggatctgatttcggtttcacaggctggttcatgtaa

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