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2026-01-17 19:19:04, GGRNA.v2 : RefSeq release 232 (Sep, 2025)

LOCUS       XM_075030001            4611 bp    mRNA    linear   VRT 04-JUL-2025
DEFINITION  PREDICTED: Buteo buteo NRDE-2, necessary for RNA interference,
            domain containing (NRDE2), transcript variant X12, mRNA.
ACCESSION   XM_075030001
VERSION     XM_075030001.1
DBLINK      BioProject: PRJNA1284932
KEYWORDS    RefSeq.
SOURCE      Buteo buteo (common buzzard)
  ORGANISM  Buteo buteo
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves;
            Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae;
            Buteo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_134176) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_964188355.1-RS_2025_07
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.4
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 07/02/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4611
                     /organism="Buteo buteo"
                     /mol_type="mRNA"
                     /db_xref="taxon:30397"
                     /chromosome="6"
     gene            1..4611
                     /gene="NRDE2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 1 sample
                     with support for all annotated introns"
                     /db_xref="GeneID:142032005"
     CDS             85..3078
                     /gene="NRDE2"
                     /codon_start=1
                     /product="nuclear exosome regulator NRDE2 isoform X9"
                     /protein_id="XP_074886102.1"
                     /db_xref="GeneID:142032005"
                     /translation="
MLEVYYWRSGQRQIRDIRQKKEFSYEELFLKEVLQEEERCMAWRTMSSSYLRIRELDWLSNPSFSTEDALLLHQRATEVANLIPEKSPLISRTTSKSELSGESDTDESLKQSSKKRKKKKKKHHNYKKTKKKTKGDSSSSESDWDTKHIKDKAEGSGRNHEKEGAANLDKKTSNLTSNRFVWLDDIQAFTAETFRIDKKPDPANWAYKSLYRGDIARYKRRGDSCLGIDAKKQCITWDSSASKRKQLQRRPERYFTKNNVKMLNTDGIPVCNKSSPSDPTAFIPVFQMETDDPSDTTDVNPLGIYDPSTTVWLQGKGCKSTDHEPVNTQQTIQEPGININSILMTKVEEHNKKVRENPRDINAWMEFVSFQDELMRGPSPYASKGEQEVRRKSLKLILEKKLAILERAIESNPSNVDLKLARLKLCTEFWEPPALIKEWQKLIFLHPNNPELWKKYLLFCQSQFTTFSVSKINSLYGKCLTTLAAVQDGTMVSHPLLPGTEEAMLAIFIQQCHFLRQAGHSEKAVSLFQALIDFTFFKPDSVKDLPTRGQVEFFEPFWDSGEPRIGEKGARGWKAWMHQQEKGGWIALKPDDDDDDEEIDEDQEIKDKSLPKWHIWLDIEYSREARHWLPWRPDKTKKETEEDCEDPERQVLFDDLGPSLIQLSNPDLQRQLLYSFLQFLGVPCTSKLFPSNLYIAMDENNIFESVLSDEKPLTSVSFPLSGFNSIGHMDTMLRGRHHIGHYKEGEEFIQNVFHVLFLLFSGKEKSNLSICWLQYEISKVVQCLQAKNKKKLKAQGRKSKKLAKNLLKEPDNRNHLSLWKLYAYLEWLLGNIDDARKVFDTALCTAGTGGCKSPQLCSLSLLYAQLEVELLESTEGAVISRAVHILTKLAESGPYVPYSGQVLSVNVLKARKTYEHALQDYLSKPSVSDQDQASLGKKEKSKGLFYKALQNCPWAKVLYMDAVEYFPDDLQETLDLMTEKELRVRVPMEELDLLLEV"
ORIGIN      
agtaaatgatttgttacacattacaaaagaaaacaataatttattaaaaagaagagaagctcaaaggctacagagaataccttcatgcttgaagtatattattggagatctggccaaagacaaatcagagacatcagacagaagaaagaattttcgtatgaagagctatttctgaaagaagtacttcaggaggaggagagatgtatggcttggcggacaatgagttcaagctatttaaggattagagaattggactggcttagtaacccaagcttctctacagaagatgcactattactgcatcagcgtgctacagaagttgcaaatctcatccctgaaaaatcaccactgataagcaggactacctcaaaatcagagttgtcaggggaaagtgatacagatgagagtctgaaacagtcaagtaagaaaaggaaaaagaaaaagaagaagcatcacaactataagaaaacaaaaaagaaaacaaaaggcgactccagtagcagcgaatcggactgggacacgaagcacatcaaggacaaagctgaaggaagtggcagaaatcatgaaaaggaaggagcagcaaatctagataagaaaacatcaaatcttaccagcaatcgctttgtttggcttgatgatatccaggctttcacggcagaaaccttccgaatagacaagaaaccagaccctgcaaactgggcctacaaatccctgtatcgaggggacatagcaagatataagaggagaggagactcctgtcttggcatagatgcaaagaaacagtgtataacttgggacagttctgcatcaaagaggaagcaattacagaggcgacctgagcgctatttcacaaagaacaatgtgaagatgctgaacacagatgggattcctgtttgcaataaaagttctccatctgacccaactgcttttataccagttttccaaatggaaactgatgatccttctgacacaacagacgtgaatcctcttgggatttatgatccatcaactacagtgtggctacaaggaaaagggtgcaagagtacagaccatgagcctgtaaatacgcagcaaacaattcaagagcctgggataaacattaactccattctaatgacaaaagtggaagaacataacaagaaagtcagagaaaacccgagagatattaatgcttggatggaatttgtttcttttcaggatgaattaatgagaggacctagcccttatgccagtaaaggagagcaggaagtaagaagaaaatcactgaagttaatcttagaaaagaagctggctattttagagagggcaattgaaagcaatccaagtaatgttgatctgaaacttgccaggctgaagctttgcacagaattctgggaaccaccagctttaatcaaagaatggcagaagctaattttcttacatcccaataatccagagctatggaagaaatatctcctgttctgtcaaagtcaattcactaccttttctgtttcaaaaatcaatagtctctatggaaaatgtttgactacattggcagctgtacaggatggcaccatggtttcacatcctctactgcctggcacagaagaagctatgctagctatatttattcagcagtgccactttctgagacaggctggccattctgagaaagcagtgtctttgtttcaggctctgattgacttcaccttctttaaacctgacagtgtaaaagatctgccaacaaggggacaggtggaattctttgaacccttttgggatagcggagaaccacgaattggagaaaaaggagcaagaggctggaaggcatggatgcatcaacaagaaaagggtggctggattgctcttaagcctgatgatgatgatgatgatgaagagatagatgaggatcaagaaataaaggataaaagtctccccaagtggcatatttggttggatattgaatattctcgcgaagcaaggcattggttaccttggaggccagacaaaaccaaaaaggaaactgaagaagattgtgaggatccagaaagacaggtattgtttgatgatcttggaccatctttaatccagctttctaatccagatcttcaacgtcaactactgtactcatttttgcaattcctgggagttccatgtacaagtaaactctttccttccaacctctatattgccatggatgaaaataacatctttgagagtgtgctttctgatgaaaagccactgacttctgttagttttccactttctggattcaacagtattggtcatatggacacgatgctacgagggagacatcacataggccactataaagaaggagaggagttcatacagaatgtttttcatgttctattcctgctattttcaggaaaggaaaagtctaacctgtccatttgttggttacagtatgaaatatctaaggtagttcagtgtctccaagcaaaaaataagaagaaactgaaagcacaagggaggaagagtaaaaagttggccaagaatctccttaaagaacctgacaaccgaaaccacctatctctctggaaactgtatgcctacctagaatggctgcttggcaacattgatgatgccaggaaggtatttgacacagctctttgcacggcagggacaggaggatgcaagagtccccagctctgcagcctcagtctgctttatgctcagctggaagtggaactactggaaagtacagaaggagctgttatatcacgtgctgttcatatattgaccaaattggctgaaagtggaccatatgtgccctatagtggacaagtgttatctgtgaatgtcttgaaagctcgtaaaacatatgagcatgcactgcaagattatttaagtaaaccatcagtttctgatcaggatcaggcttcactaggaaaaaaagaaaaaagtaaaggattgttttataaagcccttcaaaactgtccttgggcaaaggtactctatatggatgcagtagagtacttccctgatgatctgcaagagacacttgatctaatgactgaaaaagaactgagagtgcgggtacctatggaagagctggatctgctattagaggtttaaaagaagactgtagatgagtggagaaagtacagaagctagttccaaaactaacagttagacctgtctctcttcaaacgggaagtctgttgggacttgggttatttcttttggtgtttttttttgtgttttgttttgtttgtttgggtttttttaagcttttatataaattactatcaaaatggagttctattagctgcaagtattctggaatcaagtactgcattttacccacaaaaatgcatccgtttctctgaattattgctggctcccacagaaggataccctcttataaatagcctcctgttgaatgctgcccacatttcttattctattgtttgaaattacattccctagagttcagtggagattcagtacatgccagctatggtttggtgagcagcacaggaaataaacatctgccagatggatgctccactgtcctccagttggcagacttcagtaatttccttcagcttggtatgcatgcatgtgtatatataactaccaagtcaaacagccgttacatctgtatatatactgttagtaaaagctaaatctttgcttgagcgggcacctattttggtctttatatttgtatgttttgacagaagaccattttcatatgaatatttatgaaaaatacacctgaatattttaaaattcaaaaggaacttgagttattttttatttcttaatttaatagaactgtgagtgtattaaaaatgaaaatgtatccgtaaggcatctctaagcagctcgcttttaaacaagttcctgtaattgattactcgcttttgacccaaatacaggcaatcaccgtaagagaagtagaggtctggtctgtatttaatcctcaccaaagaaggcagagtagtcaaaacatgattgttcaattagtagcttctattccaagagtcttcaggcaagctcctggagaagtaatatgaaatatggtaacaatttaaagatacagttatgttatatatttattttataagacagaatatgctgaaatatgtaaaagactgtttagcatccctgctcttgagacccaagtactcagaaaccgcatcttcatctgaggagagggtacctgtagccactgaatacctgaaactgtttcagaggtttttcaggagaaaactaactgtcactaacagcactaaaacaattgggatcatccagctggtgagatctgatgacacggaaaaccagggctggagaaagccatacaatctatggctcagttttgcctgtagcaccacaacacaagatataatacactttcgtttaggctgcacttcatttattcctttctaaaattattttcaatattacagggaacatgcaggattttaaatggcattacagcacttctaaagagccttataatattgctgtggttgcaagtgatgctggcgttgctataaaagtagttgattttgaaaaaacattttatttttaaaatccatgcttctttcagaaatgacagaactcctgaattggaggtaggagttactctgtgcactgaac
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]