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Previous release (v1)
2025-11-10 19:43:24, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_074158664 4620 bp mRNA linear VRT 27-MAY-2025
DEFINITION PREDICTED: Numenius arquata ATPase copper transporting beta
(ATP7B), transcript variant X1, mRNA.
ACCESSION XM_074158664
VERSION XM_074158664.1
DBLINK BioProject: PRJNA1265768
KEYWORDS RefSeq.
SOURCE Numenius arquata (Eurasian curlew)
ORGANISM Numenius arquata
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes;
Scolopacidae; Numenius.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_133576) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_964106895.1-RS_2025_05
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.3
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 05/22/2025
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..4620
/organism="Numenius arquata"
/mol_type="mRNA"
/db_xref="taxon:31919"
/chromosome="1"
gene 1..4620
/gene="ATP7B"
/note="ATPase copper transporting beta; Derived by
automated computational analysis using gene prediction
method: Gnomon. Supporting evidence includes similarity
to: 13 Proteins"
/db_xref="GeneID:141471923"
CDS 1..4620
/gene="ATP7B"
/codon_start=1
/product="copper-transporting ATPase 2 isoform X1"
/protein_id="XP_074014765.1"
/db_xref="GeneID:141471923"
/translation="
MERKLDNKKKRELSCLATLNNKNITLVSICKQQAAHDVPELLIIGEKSKTESPVKASSNLQKEERLLQSYSMGTPEVNTVERQALSDTDSLPDCKLDPTMKHNFAFDNMGYEESFETVPSPSSQEHTVTVSIVGMTCQSCVQSIEGRISKVKGIVNIKVSLEQDNAVIKYQQSEISPEQICQEIQDMGFDTNIAEERLTTATTNLSCLREAVVKLRVEGMTCQSCVTNIEGKVRKLHGVARIKVSLGNREAIIAYYPYIIQPDDLKNHISNLGYECTIKSKSAPLKLGVLDLERLQNANPKETPASLESDGVDSLVVEMSGTATVAVRIEGMHCKSCVRNIEGNISDLPGIQSIKVSLEHKRAVVQYSPNLITLSALQQAIESLPPGNFKVGLLNGSEANKGASPSPALRCDLSREPLQDTTCTAVIRIDGMTCNSCVQSIEGTISQRQGVQRIAVSLAGRTGTIHYDPAVTNGEELRAAIEDMGFDASVLTVYCAFIQDTAAGGRRHQPDAINAVVQPRAPERPSQGCASDAFPDRPHLDGPNQPSGATAEKCFLQITGMTCASCVSTIERNLQKEHGIISVLVALMAGKAEIKYKPEFIQPLEIAQLIQNLGFEATVIEDHAGTEGNVELLITGMTCASCVHSIESKLMRTNGIFYASVALATCKAHIQFDPEITGPRDIIKIIEEIGFHASVARRVPNTHNLDHKKEIQQWRKSFLCSLLFGIPVLILMIYMLIPDGEHHGSMVLEQNLIPGLSILNLLFFILCTFVQFLGGWYFYVQAYKSLKHRTANMDVLIVLATTIAYVYSCVILMVAIIEKAEKSPVTFFDTPPMLFVFIALGRWLEHIAKSKTSEALAKLISLQATEATVVTLGPDHSIVREEQVAVELVQRGDIVKVVPGGKFPVDGKVIEGSSMADESLITGEAMPVTKKPGSTVIAGSINAHGSVLVTATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADKFSGYFVPFIIIISTVTLIAWITIGFINFDIIQKYFPNQNKHVSKTELILRFAFQTSITVLSIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDKTGTITCGVPKVMRVLLLGETAVLSLKKVLAVVGTAEASSEHPLGVAVTKYCREELSTQSLGFCTDFQAVPGCGISCKVGGVEAVLATAEKGLDKLDANRSTDSNASLGDNELIALPESQKGPSASHTYSVVIGNREWMRRNGLHIANDVNDAMTDHEMKGQTAILVAIDGVLCGMIAIADTVKQEAALAVHTLKNMGIDVVLITGDNRKTAKAIATQVGIKKVFAEVLPSHKVAKVQELQSGRRKVAMVGDGVNDSPALARADVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSKRTVRRIRINLILALIYNLLGIPIAAGVFMPVGLVLQPWMGSAAMAASSVSVVLSSLQLKCYKKPDTESYEAQAQGRMKPLTPSQISVHIGMDDRRRDSSRPAPWDQISQVSLSSLTSDKLPRRNGFVEEEGDKWSLLMNGEDDEEQYI"
ORIGIN
atggagagaaaactggacaataaaaagaaaagggaactgtcctgcttagctactttaaacaacaaaaacataaccctggtgtctatttgtaagcagcaggcagctcacgatgtgcctgaactactgattatcggtgaaaagtccaagacagaatctccggtaaaagcaagcagtaacttgcagaaagaagagagactcttgcagagttactccatgggaacgccagaagtcaatacagttgaaagacaggctttgtccgacactgattctcttcctgactgtaagctggatcctacaatgaaacataattttgcttttgacaacatgggctatgaggagagctttgaaaccgtgccctctccatcttcccaagagcacactgtgacagtcagcattgtgggaatgacttgccagtcgtgtgtgcagtcgatagaaggccgaatttccaaggtgaagggcattgtgaatattaaagtctcccttgaacaggacaacgctgtaataaagtatcagcagtcggaaataagtcctgaacagatttgccaggaaattcaggatatgggctttgacaccaacatagcagaagagaggttgacaacagcgaccacgaatttgtcatgcttgagagaagcagtagttaaacttcgggtagaaggcatgacatgccagtcctgtgtcaccaacattgaaggaaaggttaggaaactgcacggtgtggcgagaatcaaggtgtcacttggtaaccgggaagcaattattgcttattatccttacatcattcagcctgacgacctcaagaatcatatcagtaacctagggtatgaatgcaccattaaaagtaaatcagcccctttgaagctgggtgtcctcgatctcgagcggttgcagaatgcaaaccccaaggagacaccggcaagtcttgagagtgatggggtggattcgctggtcgttgagatgagtggcacagctacggtggctgtacggatagaaggcatgcactgcaagtcctgtgtcagaaacattgaaggaaatatatcagatcttcccggcatacaaagtattaaagtgtctttggagcataaacgtgctgtggtacagtatagtccaaatttaattaccctgtcagctttgcaacaagctatagaatcccttccacctggaaactttaaagtaggcctcctgaatggatcagaagcaaataaaggagcatctccatcacctgctttgcgctgtgatctctccagagagccgctgcaggacacgacatgcacagctgtcattaggattgatggcatgacctgcaattcttgcgtacagtccatagaagggaccatatcacagagacaaggagtgcaacgtatagcagtttctctagctggcagaactgggaccatacattatgatccagctgttactaatggagaagagctaagagctgccatagaagacatggggtttgatgcttctgtgctgacagtttattgtgcatttattcaagatactgctgctggaggacgtaggcaccaacctgacgccatcaatgctgtcgtgcagcctcgagctccagaacgtccttcccaaggctgtgcctcggatgcttttccagacagacctcaccttgatggaccaaaccagcccagtggagcaacagctgaaaagtgttttttacaaatcacaggcatgacctgtgcgtcgtgcgtgtctaccattgaaagaaatttgcagaaagaacacggaattatttcagtgttggtagcactgatggcaggtaaagcggagataaaatacaaaccagaattcatacagccccttgaaatagcacagctgatccagaatttgggttttgaagctactgtcatagaagatcatgcaggaacagaaggaaacgtggagcttcttattacagggatgacttgtgcttcctgtgttcacagtattgaatccaagctcatgagaacaaatggcatattctacgcctcagttgcacttgctacttgcaaagctcacatccagtttgatcctgaaattactggacctcgagatattataaaaataattgaggaaattggctttcatgcttctgtggctagaagagttccaaatacacataacctggatcataaaaaggaaatacagcagtggaggaaatctttcttgtgcagcctgctgtttggtatccctgtcttaatcctaatgatttatatgctaatacctgacggtgagcaccacgggtctatggtgctggaacagaatctcatccctggattatctattttaaatctactcttctttatcctgtgcacttttgttcagtttcttggtggatggtatttttatgtacaagcttacaaatcactgaagcacaggacggccaatatggatgtgctcatcgtactggccacgacgattgcttacgtgtattcctgtgtgatcctgatggtagcgataattgaaaaggcagagaaaagccctgtcactttcttcgacactcctccgatgctgttcgtgttcattgccctggggagatggctggaacacatagcaaagagtaagacctcagaagctcttgctaaacttatatctcttcaagccactgaagccactgtggtgactcttggaccggaccactctatcgtcagggaggagcaggtagctgttgaactggttcaaaggggtgatattgtaaaggttgttcctggtggaaagttcccggtggatggaaaggtcattgaaggcagttctatggcggatgagtctctcattactggggaagctatgccagtcactaaaaagcctgggagcacagtgattgctggttctataaatgcacatggctcagttcttgttactgcaactcatgttggtaatgataccactctggcacaaatcgtgaagttggtggaagaagctcaaatgtcgaaggcacccatccagcaactggcagataagtttagcggatattttgttccatttatcatcatcatttcaacagtgacattgatagcatggatcacaattggttttataaattttgatattattcaaaaatattttcctaatcagaacaaacacgtttcaaaaactgaactaatactgaggtttgcgtttcaaacctcaatcaccgtgctgagcattgcatgcccctgttctttaggcttggccacccccacagctgtgatggtgggcacaggagttgctgcacagaatgggattctcatcaaaggcggaaaacccctggaaatggcacacaagatcaagactgtgatgtttgataaaactgggaccatcacctgtggcgttcctaaagtcatgagggtgcttttgctgggcgagacagctgtgctctctctgaagaaggttctggcggtggtcggcactgcagaagccagcagcgagcatcccttaggagtggcagtcactaaatattgcagagaggagctcagcactcagagcctgggtttctgcaccgatttccaggcagtcccaggctgtggcatcagctgcaaagtcggaggtgttgaggccgtcctggccacggccgagaagggtcttgataagctggacgccaacaggagcacggacagcaatgcttctctgggagataacgagctgatcgcactccccgaatcacagaaaggtccatcagcttctcatacctactcagtggtgattggaaatcgtgagtggatgcgacgcaacggcttgcatattgcaaatgacgtaaatgatgcaatgacagaccatgaaatgaaaggacagactgccatactagtggctatagatggtgtgctgtgtggaatgatcgcaatagcagacactgtcaagcaggaggcagcccttgctgtgcacacgctgaaaaacatgggaatagatgtggtgctgataacgggggacaacagaaaaactgcaaaagccattgctactcaggttgggatcaaaaaagtctttgctgaggttcttccttctcacaaggttgcaaaggtccaggagctccaaagtggaaggaggaaggttgcgatggttggtgatggagtcaatgattcccctgcgctagccagggccgacgttggaattgcaattggaacgggcaccgatgttgccattgaagcagcggatgttgttcttatccgaaatgacttgctggatgtagttgccagtattcacttatcaaagagaacagttcggagaatacgaataaatctgattcttgccttaatttataatctgctcggaatacccatagcagcaggtgtgttcatgcctgtcggcctcgtgcttcagccttggatgggatcggctgcaatggcagcttcttctgtgtctgtcgtgctgtcttccctgcagctgaaatgttataagaagccagacacagaaagttatgaagcacaagctcaaggccgcatgaagccacttactccttcccaaatcagtgttcatattggaatggatgataggaggagggattcatccagaccggctccttgggatcagattagccaagtgtctctctcttccttgacttcagacaagctgccgagacgtaatggttttgttgaggaggaaggggacaagtggtcattgctcatgaatggagaagatgatgaagaacagtacatctga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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