LOCUS       XM_074134251            4472 bp    mRNA    linear   INV 20-MAY-2025
DEFINITION  PREDICTED: Rhodnius prolixus copper-transporting ATPase 1 (ATP7),
            transcript variant X4, mRNA.
ACCESSION   XM_074134251
VERSION     XM_074134251.1
DBLINK      BioProject: PRJNA1260558
KEYWORDS    RefSeq.
SOURCE      Rhodnius prolixus
  ORGANISM  Rhodnius prolixus
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Paraneoptera; Hemiptera; Heteroptera;
            Panheteroptera; Cimicomorpha; Reduviidae; Triatominae; Rhodnius.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_027411615) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_049639745.1-RS_2025_05
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 05/09/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4472
                     /organism="Rhodnius prolixus"
                     /mol_type="mRNA"
                     /isolate="KJV_2025"
                     /isolation_source="Lab colony"
                     /db_xref="taxon:13249"
                     /chromosome="Unknown"
                     /tissue_type="Thorax, abdomen"
                     /dev_stage="adult"
                     /geo_loc_name="USA: Atlanta, GA"
                     /collection_date="2022-06-21"
     gene            1..4472
                     /gene="ATP7"
                     /note="copper-transporting ATPase 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 60
                     long SRA reads, 1 Protein, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     72 samples with support for all annotated introns"
                     /db_xref="GeneID:141457359"
     CDS             191..3766
                     /gene="ATP7"
                     /codon_start=1
                     /product="copper-transporting ATPase 1 isoform X4"
                     /protein_id="XP_073990352.1"
                     /db_xref="GeneID:141457359"
                     /translation="

MTCQSCVKNIQNTIGMRVGVISIKVNLGKKNGEIFYNPCATSPAELKDAIEDMGFDATLPEEEKGVTLNVEGMTCQSCVRNIEGNISQKDGIVNIKVSLENKMAYVTFKPHILSAQEICDAIEDMGFDASLTLLNNTNSFSELSKAKANDANKSDGSIKRNCEKTSTVTQVNIDNNLDRCVIHIKGMTCASCVSAIERHCYKIPGVQNILIALLAAKAEVKYNSSQVLPDEIASSITELGFPSEVLSEEESFEGHIAIKIGGMTCASCVNKIESSVAKLKGITSAKVALTTQRGTFLFNPVETGARDIVEAIEKLGFTASVISNKDKDAGSYLDHRETIRQWRRSFIISLMFGGPCIVAMFYFMFEMSYRHISHDDMTYLFPGLSLENGLMFIFSTPVQFFGGWHFHKAAIKAVRHGTTNMDVLVSLATTISYIYSVIVLLFAIGFGHRYSPVTFFDTPPMLFVFISLGRWLESIAKGKTSEALSKLLSLKPTEAQLVTIGPDFEILSEKTISVDLVQRGDVLKVVPGAKVPVDGKVIFGNSRCDESLITGESMPVVKKKGAVVISGSINQSGLILMVATHTGESTTLAQIVKLVEEAQTSKAPIQQLADRIASYFVPFVIGISILTVLTWITVGFIDISHIPLSEESKHGFSNEEVIFQFAFRCALSVFAIACPCALGLATPTAVMVGTGVGALNGILIKGAEALENAHKVQCVVFDKTGTITQGKPKVNKICLFVKDSQCSMEKLLSIIGTAESSSEHPIASAIVEFVKHTISSDITGKSLNFQAVPGCGLRCTISHIELMIEKTCNSDKVKNYKNLSPNEPRLLNGVNIETVNLIRQPTDSGLELDRSLSIYNADNEPTSYEVLIGNREWLRRNAIHLPSVADYLMSVEEDLGHTAVLCAINGVLVSMWSVTDTVKPEAHLAVYTLKRRGLQVILLTGDNRKTAVAIAKEVGISRVFAEVLPSHKVAKIQQLQEKNLIVAMVGDGVNDSPALAQANVGIAIASGTDVAVEAADVVLMRNDLLDVIGCLDLSRKTVKRIRYNFFFASVYNLVGIPLAAGAFSSFGLTLVPWMSSAAMAMSSVSVVVSSLLLKLYKKPTRASLTTSEYELAVSACEKEINVSIHRGLDDIDRPSPSQSASSSISRFFTWPKQEPDGHLLSAEDGDEADLGLESYRYTKFDDVGSIVSPKV"

     polyA_site      4472
                     /gene="ATP7"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

gttatgaaaattctactgccgtggatactcttacacccaatctactaaggaaactaataaacaaatcagttctttatgaaattgacaatgaaaaaaagcagagccaacagtcgaatctactgcatatttaatatttgatgatgaagatggcgaggaagaaaaagaaaaagttattgtgggtatacagggcatgacatgccagtcatgtgtcaaaaatatacaaaatactattggcatgcgagttggcgtaatcagtataaaggtcaatttagggaagaaaaatggcgaaatattctacaatccctgtgcgacatctcctgccgaattaaaagatgcaatagaagatatgggtttcgatgctacattgccggaagaagagaaaggtgttactttaaacgtagaagggatgacttgtcaatcatgtgttcgaaatattgaaggaaatatatctcaaaaagatggaatcgttaatattaaggtatcgctagaaaataagatggcgtatgtaacatttaagcctcacattcttagcgcccaagagatctgtgatgcaatagaggacatgggtttcgatgcatctctaacacttttaaataatacaaattctttttctgagttgtcaaaagcaaaagcaaatgatgccaacaaatcagacggtagtatcaaaaggaattgtgaaaagacttctacagttacacaagtaaacatagacaataatttagatagatgtgtaattcatattaaaggaatgacctgcgcttcatgtgtttccgctattgaaagacattgttacaaaataccaggtgttcaaaatatattaattgccttacttgccgcaaaagctgaagttaaatataattctagtcaagtgcttcccgatgagatcgcaagttctattacagaattaggttttccgtctgaggtactgagtgaagaagaatcatttgaaggtcatattgctattaagattggaggtatgacttgcgcttcttgtgtaaataaaattgaatcaagtgtggccaaattaaaaggaattacatcggcgaaagtagcccttactacacaacggggcacatttctatttaatccagtggaaactggagctcgagatattgtcgaagctattgaaaaattaggatttactgcttctgttatatcaaataaagacaaggatgctggcagttatttagatcatagggaaactattagacaatggcggcgttcttttatcatatcattaatgtttggtggcccttgtattgtggcaatgttttattttatgtttgagatgtcctacagacatatttcccacgatgacatgacttatttatttcctggattatctcttgaaaatggtcttatgtttattttttcaacacctgttcagttttttggtggttggcatttccacaaagccgctattaaagctgtaagacatggtaccactaatatggatgtcctagtatcgttggctaccacaatatcgtacatttattctgtaattgtattgttatttgcgattggatttggtcatcgatacagtcctgtaactttttttgacacaccaccaatgttgtttgtgtttatttcattaggcagatggttggaaagcatagcgaaggggaaaacttcggaagcattatcaaaattactcagtttgaaaccaacagaagctcaattagttacaattggtccagattttgaaatattatctgaaaaaaccatatcagtagatttggttcaacgaggtgatgtattaaaagtagtacctggagcaaaagttccagttgatggaaaggttatatttggtaattctagatgcgatgaatcattaattaccggtgaatcgatgcctgtggtcaagaaaaaaggtgccgtggtgatcagtggttcaataaatcaaagtggattaattttaatggttgctacacataccggtgaatctacaactctagcacaaattgtaaaattggtggaagaagcacaaactagtaaggctccgatacaacaattagccgaccgaatagccagttattttgttccatttgtaattggaatctcaattttaactgtattaacttggattaccgttggatttattgacatatctcacattcctctatcggaagaaagtaagcatggattctccaatgaagaagtaatatttcagtttgcattcagatgtgctcttagtgtgttcgctattgcttgtccttgtgctctgggtttagcaactcctactgccgttatggttggcactggagttggagcgctcaatggaatcttgatcaaaggtgcagaagcgttagaaaatgctcacaaggtacaatgtgtagtattcgataaaactggcactataactcaaggtaaaccaaaggtaaataaaatttgtctatttgtaaaagatagtcaatgttctatggagaaattactttcaataattggaacggcggaatccagtagtgaacatccaatagcatctgcaattgttgaatttgtgaagcatacaataagtagtgatattactggaaagagccttaattttcaagctgttcccggctgtggcttgcgttgcaccatttctcacattgaactaatgattgagaaaacttgtaactctgataaagttaaaaactacaaaaacttgtcaccaaatgaaccacgtttattaaatggagttaacattgagacggtaaatttaataaggcagcctactgatagcggcttagaacttgatagatctttgagtatctacaatgctgacaatgaacctacaagctatgaagttcttatcggtaatagagaatggttaagaagaaacgccattcatttaccatcagtggccgattatttgatgtctgtagaagaagatttgggtcatactgctgtactttgtgctattaatggcgttcttgtatcaatgtggagtgtaactgatactgtgaaacctgaagcacatttagccgtttacacgttaaaaaggagaggtcttcaagttatcttgttaactggagataatagaaaaaccgctgttgctattgctaaagaggttggtatcagtagagtattcgcagaagtattgccttctcataaagtagccaaaatacagcaattacaagagaaaaacttgatagtagcaatggtaggagatggtgttaatgattcacctgctcttgctcaagctaacgtaggcattgctattgcatcaggaactgatgtcgctgtagaagctgccgatgttgttctaatgcggaacgatttacttgacgtgattggatgtttagatctctctcgaaaaactgtaaaaaggattaggtataatttcttttttgcaagtgtttataatctcgttgggatcccgttggctgcaggtgcattcagttctttcggccttactctggtgccctggatgtcttcagctgctatggctatgagttcagtgtcagtggttgtgtcatctttattactgaagttatataagaagcctacccgtgcaagtttaaccacctctgaatatgaacttgctgtgtctgcttgcgaaaaagaaataaacgtctctattcacagaggattagatgatattgacagaccgtctccttcccagtcagcttccagttcaatcagcagatttttcacatggcctaaacaagaaccagatggacacttattaagcgcggaagatggcgacgaagcagatcttggcctagaatcttatagatatacaaaatttgatgatgttggtagcattgtctcaccgaaggtataaaacgactaagaagtgtattcttgatctattgcttacttgaatgtaatttattcgaatgtacatttatttagaaaatactatttttatttaacattattactgaattttccaagttccatagttttccattaatccgtagaggattttattactttcgttcaatgttgtaacttatatcattctttggaagctttttaatatgcttaaaataaccgaaaacagaaataaatataatatgataatcgaatgactttcggtatgtatgtaaaaaaatgtctactgtgaacgattttagcctatcatgtaaagtaaaatattcgtaaccattcccctgaagatgaggaaaagtggaaaataaagtaattaaaacaaaattcatgttattttcatttaagtcttaatcagttttgcttagtaattataaattacttactttatttgattttgtgatttattacagtacttattgttacttttctatttcattttaaacgcgattaaaatttatttgtataaataaaggttttattttttcgttttttatttacttttaatatattaaatcgccaaatcgattgcaaaaagtgtatgtacagtacttatgtattgccaagtaataagtgaacatatttcttataaattttttattctgaattaatgtttaaaaatgttataagttagaaatatatattttttaattatttta

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