2025-09-14 20:57:29, GGRNA.v2 : RefSeq release 231 (Jul, 2025)
LOCUS XM_072850278 6373 bp mRNA linear VRT 03-APR-2025 DEFINITION PREDICTED: Ciconia boyciana ATPase copper transporting beta (ATP7B), transcript variant X2, mRNA. ACCESSION XM_072850278 VERSION XM_072850278.1 DBLINK BioProject: PRJNA1244888 KEYWORDS RefSeq. SOURCE Ciconia boyciana (Oriental stork) ORGANISM Ciconia boyciana Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Ciconiiformes; Ciconiidae; Ciconia. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_132934) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_034638445.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/02/2025 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6373 /organism="Ciconia boyciana" /mol_type="mRNA" /db_xref="taxon:52775" /chromosome="1" gene 1..6373 /gene="ATP7B" /note="ATPase copper transporting beta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins" /db_xref="GeneID:140646404" CDS 160..4458 /gene="ATP7B" /codon_start=1 /product="copper-transporting ATPase 2 isoform X2" /protein_id="XP_072706379.1" /db_xref="GeneID:140646404" /translation="
MKHNFAFDNMGYEESFETAPSPSSQEHTLAVNVVGMTCQSCVQSIEGRISKVKGIVSIKVSLEKNNAVIKYLQSDISPEQICQEIQDMGFDANVTEERLTTATINLSCLREAVVKLQVEGMTCQSCVTNIEGKIRKLHGVAKIKVSLGNQEAIIAYYPYIIQPDDLKSHISNLGYECTIKSKAAPLKLGVLDLRHMQNANPKETPASLKSDGMDPPVAKMSGTATVAVRIEGMHCKSCVRNIEGNISDLPGIQSIKVSLEHKRAVVQYSPNLITLSALQQAIESLPPGNFKVCLPNGSEVNKGASPSPALLCDLFREPLQDTTRTAVIRIDGMTCNSCVQSIEGTVSQRQGVQCIAVSLADRTGTIHYDPAVTNGEELRAAIEDMGFDASVLTDTTAGERGHRPDTSNAAVQPQVPEPPHQGCASDAFPDSPHLDGPNQPSGVTAEKCFLQITGMTCASCVSTIERNLQKEDGIVSVLVALMAGKAEIKYKPEFIQPLEIAQLIQNLGFEATVIEDHAEIEGNVELLITGMTCASCVHNIESKLMRTNGIFYASVALATCKAHIQFDPEITGPRDIIKIIEEIGFHASVARRVPNAHNLDHKKEIQQWRKSFLCSLLFGIPVLILMIYMLIPDGEHHGSMVLEQNLIPGLSVLNLLFFVLCTFVQFLGGWYFYVQAYKSLKHKTANMDVLIVLATTIAYVYSCVILMVAIIEKAEKSPVTFFDTPPMLFVFIALGRWLEHIAKSKTSEALAKLISLQATEATVVTLGPDHSIVREEQVAVELVQRGDIVKVVPGGKFPVDGKVIEGSSMADESLITGEAMPVTKKPGSTVIAGSINAHGSVLVNATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADKFSGYFVPFIIIISTVTLIVWITIGFINFDVIQKYFPNQNKHVSKAELILRFAFQTSITVLSIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDKTGTITCGVPKVMRVLLLGDTAVLSLKKVLAVVGTAEASSEHPLGVAVTKYCKEELGTQSLGYCTDFQAVPGCGISCKVRGIEAILGTDEEGLDNLDTNRNRDSSAPLGDDNMLITLSESHGPSASHTYSVLIGNREWMRRNGLHIANDINDAMTDHETKGQTAILVAIDGVLCGMIAIADTVKQEAALAVHTLKNMGIDVVLITGDNRKTAKAIATQVGIKKVFAEVLPSHKVAKVQELQNGRRKVAMVGDGVNDSPALARADIGIAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSKRTVRRIRINLILALIYNLLGIPIAAGVFMPVGLVLQPWMGSAAMAASSVSVVLSSLQLKCYKKPDTESYEAQAQGRMKPLTPSQISVHIGMDDRRRDSSRPAPWDQISQVSLSSLTSDKLPRRNAFVEEEGDKWSLLMNGGDEEQYI"
ORIGIN
aaaggcaagagggtgacagctagtttcagcctgtggaggtacagggagaagagcagcccaaaacctctgaagatactgggcgagaggttcagtgagatccggcattcgtgggctttgtccaacactgattctcctcctgactgtgagctggagcctacaatgaaacacaattttgcttttgacaacatgggttacgaggagagctttgaaactgcgccctctccatcttcccaagaacacactttggcagtcaatgttgtgggaatgacttgccaatcttgtgtgcagtcaatagaaggccgaatttccaaggtgaagggcattgtgagtattaaagtctcccttgagaagaacaatgctgtaataaagtatctgcagtcggatataagtcctgaacagatttgccaggaaattcaggatatgggctttgacgccaacgtaacagaagagaggttgacgacagcgaccataaatttgtcgtgcttgagagaagcagtagttaagcttcaggtagaaggcatgacatgccagtcctgtgtcaccaacattgaaggaaagattaggaaactgcatggtgtggcgaaaatcaaggtgtcacttggtaaccaggaagcaattattgcctactatccctacatcattcagcctgatgaccttaagagccatatcagtaacctgggatatgaatgcaccattaaaagtaaagcagcccctttgaagcttggtgtcctcgatctcaggcacatgcagaatgcaaaccccaaggagacaccagcaagtctcaagagtgatgggatggatccaccggtcgccaagatgagtggcacagctacagtggctgtacggatagaaggcatgcactgcaaatcctgtgtcagaaacattgaaggaaatatatcagatcttcctggcatacaaagtattaaagtgtctttggagcataaacgtgctgtggtacagtatagcccaaatttaattaccctgtcagctttgcagcaagctattgaatcccttccacctggaaactttaaagtatgtctccctaatggttcggaagttaataagggagcatctccttcacctgctttgctatgtgatctcttcagagagccgctgcaagacacgacacgcacagctgttattaggattgatggcatgacctgcaattcctgtgtacagtccatagaagggaccgtatcacagaggcaaggagtgcaatgtatagcagtttctctagctgacagaactgggaccatacattatgatccagctgtcactaatggagaagagttaagagctgccatagaagacatggggtttgatgcttctgtgctgacagataccaccgctggagaacgtgggcaccgacctgacaccagcaatgctgccgtgcagcctcaagttccagagcctcctcaccaaggctgtgcttcggatgcttttccagacagtcctcaccttgatggaccaaaccagcccagcggagtgacagctgaaaagtgttttttacaaatcacaggcatgacctgtgcatcgtgtgtgtctaccattgaaagaaatttgcagaaagaagacggaattgtttcagtgttggtagcactgatggcaggtaaagcagagataaaatacaagccagaattcatacagcctcttgaaatagcacagctgatccagaatttgggttttgaagctaccgtcatagaagatcatgcagaaatagaaggaaatgtggagcttcttattacagggatgacttgtgcttcttgtgttcacaatattgaatccaaactcatgagaacaaatggcatattctacgcctcagttgcacttgctacttgcaaagctcacatccagtttgatcctgaaattactggacctcgagatattataaaaataattgaggaaattggctttcatgcttctgtggctagaagagttccaaatgcacataacctagatcataaaaaggaaatacagcagtggaggaagtctttcttgtgcagcctactgtttggtatccctgtcttaatcctaatgatttatatgctaatacccgacggcgagcaccatgggtctatggtgctggaacagaatctcattcctggattatctgttttaaatcttctcttctttgtcctgtgcacttttgttcagtttcttggtggatggtatttttacgtacaagcttacaaatcactgaagcacaagacagccaatatggatgtgctcattgtattggccacgacgattgcttatgtgtattcgtgtgtgatcctaatggtagcgataattgaaaaggcagagaaaagccctgtcactttctttgacactcctccgatgctgttcgtgttcattgcccttgggagatggctggaacacatagcaaagagtaagacctcagaagctcttgctaaacttatatctcttcaagccacagaagccactgtggtgactcttggacctgaccactctatcgtcagggaggagcaggtagctgttgaactggttcaaaggggtgatattgtaaaggttgttcctggtggaaagttcccggtggatggaaaggtcattgaaggcagttctatggcagatgagtctctcattactggggaagctatgccagtcactaaaaagcctgggagcacagtgattgctggttctataaacgcacatggctcagttcttgttaatgcaactcatgttggtaatgataccactctggcacaaatcgtgaaattggtggaagaagctcaaatgtcaaaggcacccatccagcaactggcagataagtttagtggatattttgttccatttatcatcatcatttcaacagtgacattgatagtatggatcacaattggttttataaattttgatgttattcaaaaatattttcctaatcagaacaaacacgtttcaaaagctgaactaatactgaggtttgcatttcaaacctcaatcactgtgctgagcattgcatgcccctgttctttaggcttggctacccccacagctgtgatggtgggcacaggagttgctgcgcagaatggtattctcatcaaaggtggaaaacctctggaaatggcacacaagatcaagactgtgatgtttgataaaactgggaccatcacctgtggagttcctaaagtcatgagggtgcttttgctgggagacacggctgtgctctctctgaagaaggtactggcggtggttggcactgcagaagccagcagcgaacatcctttaggagtggcagtcactaaatattgcaaagaggagcttggcactcagagcctaggatactgcaccgacttccaggcagtcccgggctgtggcatcagctgcaaagtcagaggtattgaggccatcctgggcacggacgaggagggtcttgataatctggacactaacaggaacagggacagcagcgctcctctgggagatgataacatgctgatcaccctctccgaatcacatggtccatcagcttctcatacatactcggtgttgattggaaatcgtgagtggatgcgacgcaatggcttgcatattgcaaatgacataaatgatgcaatgacagaccatgaaacaaaaggacagactgccatactagtggctatagatggcgtgttgtgtggaatgattgcaatagcagacactgtcaagcaggaggcagcccttgctgtgcacacgctgaaaaacatgggaatagatgtggtgctgataacgggggacaacagaaaaactgcaaaagccattgctactcaggttgggatcaaaaaagtctttgctgaggttcttccttctcacaaggttgcaaaggtccaggagctccaaaatgggaggaggaaggttgcgatggttggtgatggagtcaatgattcccctgcgctagccagggccgacatcggaattgcaattggaacgggcaccgatgttgccattgaagcagcagatgttgttctcatccgaaacgacttgctggatgtagttgccagtattcacttatcaaagagaacagttcgaagaatacgaataaatctgattcttgccttaatttataatctgcttggaatacccatagcagcaggtgtgttcatgcctgttggcctcgtgcttcagccttggatgggatcagctgcaatggcagcttcttctgtgtctgttgtgctgtcttccctgcagctgaaatgttataagaagccagacactgaaagttatgaagcacaagctcaaggccgcatgaagccacttactccttcccaaatcagtgttcatattggaatggatgataggaggagggattcatccagaccggctccttgggatcagattagccaagtgtctctctcttccttgacttcagacaagctgccgagacgtaatgcttttgttgaggaggaaggggacaagtggtcattgcttatgaatggaggagatgaagaacagtatatctgaagcactgtattcttagtacaggaggaaatgttcctcctcatcagtgacaggagtgaccaatttatgtcatcaagagcttcaaggttgtagcgaagtcattccttcagctcacaaaatgattgcaactcagctcaatgttgggctgtatggatggtggatttttttcaggtcaccagttacttctagtcatggaaagaatctgtggctctctaatgaactggctcctttgcacacagcaattagtgaaataatgtagaattgtaattttcagagtctaaaagagcttctctcttctagactgtttgctgggcaccaaatttcatacttttagctctttctaactttattctttgaagagcacatgaagcaaaaatatgttcagagctgccaaatattaatttctgtgtccaagtgaaaatagccatggcataaggagctctgtggttggaagttgtatttttacacagaatcctaactagtcatgtcactgtgagagcactttgtatttaggattcatatgtgtctccttggaccaaaaatgctttggtgtttcactgactagaactctctgaaaggtctctcaaagattttcacttgctttcaggtattgcatccttttgatgcacatttccattgctaaacttgttctgtcattcacactgctctcctagattttctcttttgctccgtatgagctcttttttcccttttctttgcacaagatatcttctatgagttattgttatgtttacagatattcctgtttgggacaaactcctttaagtcaccaggaacttttccattcctattgaagtcctcaaaggcagagcaattcctggtccaagttagcatatcattttcctgtggataccttgcaggaccccgtgaagctcctgacaactgggtagttgtctgtctcgtccctctgacagagtgaagaatttatgccagtgtgagtgaaggtggtatttacatggtgtgactgagagcagaactagcactgctgtgactccagcatggctgaaagaagtgagtttattgcataagttaaccccagcttgcttaaaatggagccaaaagtttaaatggtaaaggtggaaaaatggccttaaaatgtggggcttctatttgctatcatataaataaccttttctgatgacagaaggacttgaactaagatttgtaatggcttgaattttaatgtaaatttgtgttcatgttttgaataggttttaatttccctctttgctctagtttcatgagaaatcaaggtgctgaacaaccctttttttcacttttaacgtctttaccaaagcttgcagtaactttatcactgtgaatgtcaaattcatcccttaacacttttcagtcaggacagtaggaatcaatggctttggtgcactgaatccggtcctggggtgctgcgttgctcagctgtgggactctgaagcaagcagactggagttttatagtcaaatctaaaaagtgaaagaccaggaattactgtgctaagcaatgtgaaataaccactgaacttcactgacttaaatacagaattgtttccaatacaggttcaaaccctgctcctcctaatgtaaaaatgaaaaacaagtcagagaggaaaagaactgtgcttaaagcattgagcaggtcttcctattctctcttcctcttaatattatatttcagctttccttatcaaacatcgacagcactgtcttaaatataattacaaatcagttttaaaactgtaaaaatctctttacatgtgtagagattactttcacagcacacacactttttaaacatgccgtaggttcctatacatgtccctgtggggaagatggtctactgttttatgttttcttaccagtgcttacagtaaaaatattgtgttttttaaaacaagcaaaca
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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