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2026-01-17 22:13:11, GGRNA.v2 : RefSeq release 232 (Sep, 2025)

LOCUS       XM_071905881            1654 bp    mRNA    linear   VRT 07-MAR-2025
DEFINITION  PREDICTED: Centroberyx gerrardi claudin-4-like (LOC139916866),
            mRNA.
ACCESSION   XM_071905881
VERSION     XM_071905881.1
DBLINK      BioProject: PRJNA1232093
KEYWORDS    RefSeq.
SOURCE      Centroberyx gerrardi (bight redfish)
  ORGANISM  Centroberyx gerrardi
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Berycimorphaceae; Beryciformes; Berycidae;
            Centroberyx.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_027300956) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_026898505.1-RS_2025_03
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 03/06/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1654
                     /organism="Centroberyx gerrardi"
                     /mol_type="mRNA"
                     /db_xref="taxon:166262"
                     /chromosome="Unknown"
     gene            1..1654
                     /gene="LOC139916866"
                     /note="claudin-4-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 343 Proteins"
                     /db_xref="GeneID:139916866"
     CDS             92..1246
                     /gene="LOC139916866"
                     /codon_start=1
                     /product="claudin-4-like"
                     /protein_id="XP_071761982.1"
                     /db_xref="GeneID:139916866"
                     /translation="
MVSMGRQMLGFALAIIGFLGTIIVCALPMWKVTAFIGANIVTAQTIWEGLWMNCVMQSTGQMQCKIYDSLLALPQDLQAARALVVIAIIAAAFGVIVGIAGGKCTTFVENESSKAKVAIAAGIIFICAGVLILIPVCWSANTIIRDFYNPIITNAQRRELGAMGSMGMQMLGSALALFGWIGVIIVCGAPMWRVTAFIGNNIVTSQTIWEGIWMSCVVQSTGQMQCKVYDSMLALSSDLQAARALVVVSIVTGIAGLLMAFAGGKCTNFIPEEAAKAKATVAAGVVLIISGILCLIPVSWTASIIIRDFYNPLLTDAQRRELGAALYVGWGAGILLVMGGGLLCANCPPKEDKAPSVNYLLNKSSGGRSKQDSVRSSTPTKTYI"
     misc_feature    101..559
                     /gene="LOC139916866"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; cl21598"
                     /db_xref="CDD:473919"
     misc_feature    587..1120
                     /gene="LOC139916866"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; cl21598"
                     /db_xref="CDD:473919"
ORIGIN      
ctttaccactgagctgaactgacctgctactgaaacactcaacttcctttctgcttcagtactacagaagtgactaaaacaagactccgccatggtgtcaatgggacgacagatgctgggctttgccttggccatcatcggcttcctgggaaccatcatcgtgtgcgctctgcccatgtggaaagtcacagccttcatcggagccaacattgtgacggcgcagaccatctgggaaggcttgtggatgaactgtgtgatgcagagcacgggccagatgcagtgcaagatctacgactccctgctggctctgccccaggacctgcaggccgccagagcgctggtggttatcgccatcatcgccgccgccttcggggtcatcgtgggcatcgccgggggcaagtgcactacctttgtggagaacgagagctccaaagccaaggtggccatcgctgccggaatcatcttcatctgcgccggcgtcctcatcctcatccccgtctgctggtcagccaacaccatcatcagggacttctacaaccccatcatcaccaacgcccagaggagggagctgggggcgatgggttccatggggatgcagatgctgggcagcgctctggccctgttcggctggatcggggtaatcatcgtctgcggcgcgcccatgtggcgggtcaccgccttcattggcaacaacatagtgacatcccagaccatctgggagggcatctggatgagctgcgtggtccagagcacgggccagatgcagtgcaaggtgtacgactccatgctggctctgagctccgaccttcaggcggcccgggccttggtggtggtttctattgtcaccggcatcgccggactcctcatggcctttgctggcggcaagtgcaccaacttcattccagaggaggcagccaaggcgaaggccacggtggcggccggggtggtgctgatcatcagcgggatcctctgcctcatccccgtgtcctggacggccagcatcatcatcagggacttctacaaccctctgctgaccgacgcccagagaagagagcttggggcagctctttatgtcggctggggcgccgggatactgctggtcatgggaggggggctgctgtgtgccaactgcccccccaaggaggacaaagccccgtctgtgaactacctgctgaataagtcttcaggaggacgcagcaagcaggactcagtccggtcttctactccgacaaagacttatatttgagacaagggacaaatggcagatttttgtcttcaacaagtaatagaagcttgaagtataaggactagctgtgaaacatgaaggaaaagctcctgatagaaaggatgtatgcacagacagcgcactgtgaaggaaatatgcacttcatcgttgaatttttacctggcattcacactttgaatgagtgtatgaagacactaaatgattgagatttctgtaaatatcaatgttgttctttgcaatgaacatgtatatggatgtagtttaaataatggtgactaggtatttttatatttgggaaaattggtaattccaatttgaagatgtaaatttaaattctgtgattgcacctttttttgctttgatatttgtgattttatcacaataaatgtctttgtagggcgagttttt
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]