LOCUS       XM_069251171            1488 bp    mRNA    linear   INV 18-OCT-2024
DEFINITION  PREDICTED: Argopecten irradians coiled-coil domain-containing
            protein 1-like (LOC138310019), mRNA.
ACCESSION   XM_069251171
VERSION     XM_069251171.1
DBLINK      BioProject: PRJNA1171459
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Argopecten irradians (bay scallop)
  ORGANISM  Argopecten irradians
            Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia;
            Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae;
            Argopecten.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091149) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_041381155.1-RS_2024_10
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 10/11/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1488
                     /organism="Argopecten irradians"
                     /mol_type="mRNA"
                     /isolate="NY"
                     /isolation_source="New York"
                     /db_xref="taxon:31199"
                     /chromosome="16"
                     /tissue_type="testis"
                     /geo_loc_name="USA: New York, Orient Harbor"
                     /lat_lon="41.137904 N 72.315392 W"
                     /collection_date="2021"
     gene            1..1488
                     /gene="LOC138310019"
                     /note="coiled-coil domain-containing protein 1-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 9 Proteins"
                     /db_xref="GeneID:138310019"
     CDS             1..1488
                     /gene="LOC138310019"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 1-like"
                     /protein_id="XP_069107272.1"
                     /db_xref="GeneID:138310019"
                     /translation="

MRLTMVLMRLTGVEEVDGGIDEVDDVNEVYDGDDEVDDGDDEVDDGDDEVDDGDDEVDDGDDEVDDGDDEVDDGDDEVDDGDDEVDDGVNEVDDGDDEVGDGIDEIDDGVNEIDDGDDEVDGGIDEVDDDVNEVYDGDDEVDDGDDEVDDGDDEVDDGVNEVDDGDDEVDDSTDEVDDGVEEVDGGIDEVDDDVNEVYDGDDEVNDGDDEVDDGDDEVDDGVNEVDDGDDEVGDCIDEIDDGVNEIDDGDDEVDDSTDEVDDSVNEIDDGADEVDGGIDEVDDSVNEIDDSTDEVDDGVNEVDDGVNKVYDSTDEVDGSIDEVDDGADEVDDSTDEVDDSTDEVDDSTDEVDDGVNEVDDGADEVDGTMVDDGADEVDDSIDEVDDSADEVDGSIDEVDDGVNKVDDSTDEVDDAADEVDDGADEVDDGADEVDDGADEVDDGADEVDDNVNEIDDGVNKVDDSTDEVDDSTDEVDDSTDEVDGSIDEVGEHDNS"

     misc_feature    37..>1476
                     /gene="LOC138310019"
                     /note="Midasin, AAA ATPase with vWA domain, involved in
                     ribosome maturation [Translation, ribosomal structure and
                     biogenesis]; Region: MDN1; COG5271"
                     /db_xref="CDD:444083"
     misc_feature    <775..1473
                     /gene="LOC138310019"
                     /note="Methyl-accepting chemotaxis protein (MCP) [Signal
                     transduction mechanisms]; Region: Tar; COG0840"
                     /db_xref="CDD:440602"
ORIGIN      

atgaggttgacgatggtgctgatgaggttgactggtgttgaggaggttgacggtggtattgacgaggttgatgatgttaatgaagtttacgatggtgatgatgaagttgacgatggtgatgatgaagttgacgatggtgatgatgaggttgacgatggtgatgatgaagttgacgatggtgatgatgaggttgacgatggtgatgacgaggttgacgatggtgatgatgaagttgacgatggtgatgatgaggttgacgatggtgttaatgaggttgacgatggtgatgatgaggttggcgatggtattgatgagattgacgatggtgttaatgagattgacgatggtgatgatgaggttgacggtggtattgacgaggttgatgatgatgttaatgaagtttacgatggtgatgacgaggttgacgatggtgatgatgaggttgacgatggtgatgatgaggttgacgatggtgttaatgaggttgacgatggtgatgatgaggttgacgatagtactgatgaggttgacgatggtgttgaggaggttgacggtggtattgacgaggttgatgatgatgttaatgaagtttacgatggtgatgacgaggttaacgatggtgatgatgaggttgacgatggtgatgatgaggttgacgatggtgttaatgaggttgacgatggtgatgatgaggttggcgattgtattgatgagattgacgatggtgttaatgagattgacgatggtgatgatgaggttgacgatagtactgatgaggttgacgatagtgttaatgagattgacgatggtgctgatgaggttgacggtggtattgatgaggttgacgatagtgttaatgagattgacgatagtactgatgaggttgacgatggtgttaatgaagttgacgatggtgttaataaggtttacgatagtactgatgaggttgacggaagtattgatgaggttgacgatggtgctgatgaggttgacgatagtactgatgaggttgacgatagtactgatgaggttgacgatagtactgatgaggttgacgatggtgttaatgaggttgacgatggtgctgatgaggttgacggtacgatggttgacgatggtgctgatgaggttgacgatagtattgatgaggttgacgatagtgctgatgaggttgacggaagtattgatgaggttgacgatggtgttaataaggttgacgatagtactgatgaggttgacgatgctgctgatgaagttgacgatggtgctgatgaggttgacgatggtgctgatgaggttgacgatggtgctgatgaggttgacgatggtgctgatgaggttgacgataatgttaatgagattgacgatggtgttaataaggttgacgatagtactgatgaggttgacgatagtactgatgaggttgacgatagtactgatgaggttgacggaagtattgatgaggttggtgagcatgataacagttga

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