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2025-07-03 14:14:56, GGRNA.v2 : RefSeq release 229 (Mar, 2025)

LOCUS       XM_063733495             550 bp    mRNA    linear   INV 08-MAR-2024
DEFINITION  PREDICTED: Penaeus indicus cuticle protein 18.6-like
            (LOC134766566), mRNA.
ACCESSION   XM_063733495
VERSION     XM_063733495.1
DBLINK      BioProject: PRJNA1078788
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Penaeus indicus
  ORGANISM  Penaeus indicus
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea;
            Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda;
            Dendrobranchiata; Penaeoidea; Penaeidae; Penaeus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026948809) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_018983055.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/23/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 41% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Penaeus indicus"
                     /mol_type="mRNA"
                     /isolate="CIBA_PI_04"
                     /isolation_source="Wild caught"
                     /db_xref="taxon:29960"
                     /chromosome="Unknown"
                     /tissue_type="muscle"
                     /geo_loc_name="India: Chennai"
                     /collection_date="2017"
     gene            1..550
                     /gene="LOC134766566"
                     /note="cuticle protein 18.6-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins"
                     /db_xref="GeneID:134766566"
     CDS             1..468
                     /gene="LOC134766566"
                     /codon_start=1
                     /product="cuticle protein 18.6-like"
                     /protein_id="XP_063589565.1"
                     /db_xref="GeneID:134766566"
                     /translation="
MAMPSLNPIAQIMPGNKMNTSEHPLKAVTSLRRVELRVYKVKAFSVLHQLEAHPQHVSQGPSYGYAAPTPAPAPAKYDFNYAVKDEYSGNDFGHQEARDGYDTQGSYYVQLPDGRLQKVTYTVNGDSGFVAEVSYEGEAQYPAEQPAYKPAPSYA"
     polyA_site      550
                     /gene="LOC134766566"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
atggctatgccttcattgaaccccattgctcaaattatgccgggaaacaaaatgaatacatctgaacatcctctgaaggccgtgacgtcattgcgtagggtggagcttagagtatataaagtgaaggcgttctccgttctccatcagttagaagctcatcctcaacatgtctcccaaggccccagctatggctatgcagcccctacacctgctcctgcacctgccaagtacgacttcaactacgctgtcaaggacgagtactccggtaacgactttggccaccaggaggcccgcgacggttatgacacccagggttcctactacgttcagcttcccgacggtcgtctgcagaaggtcacctacactgtcaacggcgactctggcttcgtggccgaggtcagctacgagggcgaggcgcagtatcctgccgaacagcctgcttacaagcccgccccctcatatgcttagatcgcaaatcaagttcggctgtgataatatttattaaggaaatcctttacattgtatatttgtaaataaatcatgaaaatga
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]