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Previous release (v1)
2026-10-06 02:21:27, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_063505807 1848 bp mRNA linear INV 28-FEB-2024
DEFINITION PREDICTED: Cydia amplana uncharacterized LOC134650872
(LOC134650872), mRNA.
ACCESSION XM_063505807
VERSION XM_063505807.1
DBLINK BioProject: PRJNA1074829
KEYWORDS RefSeq; includes ab initio.
SOURCE Cydia amplana
ORGANISM Cydia amplana
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata;
Ditrysia; Tortricoidea; Tortricidae; Olethreutinae; Grapholitini;
Cydia.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_086077) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_948474715.1-RS_2024_02
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.2
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 02/09/2024
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
ab initio :: 10% of CDS bases
##RefSeq-Attributes-END##
FEATURES Location/Qualifiers
source 1..1848
/organism="Cydia amplana"
/mol_type="mRNA"
/db_xref="taxon:1869771"
/chromosome="9"
gene 1..1848
/gene="LOC134650872"
/note="uncharacterized LOC134650872; Derived by automated
computational analysis using gene prediction method:
Gnomon. Supporting evidence includes similarity to: 7
Proteins"
/db_xref="GeneID:134650872"
CDS 40..1848
/gene="LOC134650872"
/codon_start=1
/product="uncharacterized protein LOC134650872"
/protein_id="XP_063361877.1"
/db_xref="GeneID:134650872"
/translation="
MAPEKLAIFGVVVLLLATAVLAKDCRGAFCKHRVECDFRGVRCHDCRTRLICTPRGGILGSCWFPGRRYCSKGRCVKHPSTECATEGPSTSPPSNSTENPATLDPASTTEDSTTDPTPTIDPAFTTEADTTDVTSTTADTSTDPTLDPASTTDESNSTTEESSTTDTGSTVEPDSATDESTSTTDESTSTTEGSSTTYSSSTIEPDSVTDESTSTTEEGTSTTEESSTTDASSTIEPDSTADESTSTTEDSSSRDKATSTTEESSTIDASSTVEPDSTTDESSSTTDEATSTTEGSSTTEEDNSTTEPASTIETDSATEESTSTTEGSSTTEEDSSTTEPASSIETDSATEESTSTTEGSSTTEEDSFTTEPPSTIETDSATEESTSTTEGSSTTEEDSSTTEPASTIETDSATEESTSTTEGSSTTEEDSYTTEPISTIETDSARDESSSTTEGPSTTEEDSSTTEPASTIETDSVTEESSSTPEGSSNTEEDSSTTKPASTIDPDSTTESTASEESTDEGSTTEGSSTIDEQSTTEGQSTTEEEECIPGQHQHEAAARAQCLRRGARNLLCGDYRPGRGSPDRTAPGDARVDMQVPGTLL"
misc_feature 1390..>1695
/gene="LOC134650872"
/note="bifunctional 2',3'-cyclic-nucleotide
2'-phosphodiesterase/3'-nucleotidase; Region: PRK11907"
/db_xref="CDD:237019"
ORIGIN
ttagttgaatacagggctgtggtgggaacaagtggaataatggctcctgaaaaattggctatttttggagttgtagtgttgctgctcgcgacggcggtcctggccaaggactgtcgaggcgctttttgcaaacaccgcgtcgaatgtgacttcaggggagtccgctgccacgattgccgcacccgcctgatctgcactcctcgcggcggcatcctcggctcttgttggttccctggtcgccggtactgctctaaaggccgctgcgtcaagcaccctagcacagaatgtgctactgaaggaccatctactagcccaccttctaatagtactgagaatcctgccactttagaccctgcaagtactacagaagattcaacaacagatcctacgcccacaatagatcctgcatttactacagaggcagataccactgatgttacatctactactgcagacacgtctaccgatcctaccttagatcctgcaagtactactgatgaatctaattctactactgaagaatcttcaacgactgatacaggttctacggtagagcctgattctgctacagacgaatccacttctaccacagatgaatctacttctaccactgaaggatcttctacaacttactcaagttctaccatagaacccgattctgttaccgatgaatccacttctactacagaagaaggtacttctaccactgaagaatcttctacaactgacgcaagttctaccatagaacctgattctaccgcagacgaatctacttctaccaccgaagactcgtcaagcagagataaagctacttctactactgaagaatcttctacaattgatgcaagttctaccgtagagcctgattctactacagacgaatcctcttctaccacggatgaagctacttctaccactgaaggttcatctactactgaagaagataattctaccactgagccagcttctactatagaaactgattctgccacagaagagtccacttctaccactgaaggttcgtctactaccgaagaagatagttctaccacagagccagcttcttctatagaaacagattctgccacagaagaatctacttctaccactgaaggttcgtctactaccgaagaagatagttttaccacagagccaccttctactatagaaactgattctgccacagaagagtctacttctaccactgaaggttcgtctactaccgaagaagatagttctaccacagagccagcttctactatagaaactgattctgccacagaagagtctacttctaccactgaaggttcgtctactaccgaagaagatagttataccacagagccaatttctactatagaaactgattctgccagagatgaatcttcttctaccactgaaggtccgtctactaccgaagaagatagttctactacagagccagcttctactatagaaactgattctgtcacagaagaatcttcttctacccctgaaggttcgtctaataccgaagaagatagttctaccacaaagccagcttctactatagaccctgattctacaacagaatccactgccagcgaagaatctacggatgaaggttctactacggaaggatcatctacaatcgatgagcaatctactacggagggacaatctactacagaggaggaagagtgcataccagggcagcatcagcacgaggcagctgcccgggcacagtgtttacgtcgcggcgcacgcaacctgttgtgcggggactatcgaccggggcgaggcagtcccgaccgcaccgcgcccggcgacgcgcgtgtagacatgcaggtgccaggcaccctgctctaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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