2024-11-01 08:34:25, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XM_061002409 4945 bp mRNA linear INV 16-NOV-2023 DEFINITION PREDICTED: Metopolophium dirhodum repetitive organellar protein-like (LOC132935789), mRNA. ACCESSION XM_061002409 VERSION XM_061002409.1 DBLINK BioProject: PRJNA1037065 KEYWORDS RefSeq. SOURCE Metopolophium dirhodum (rose-grain aphid) ORGANISM Metopolophium dirhodum Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Metopolophium. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_083560) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_019925205.1-RS_2023_11 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 11/09/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4945 /organism="Metopolophium dirhodum" /mol_type="mRNA" /isolate="CAU" /host="Triticum aestivum" /db_xref="taxon:44670" /chromosome="1" /tissue_type="whole body" /geo_loc_name="China" /collection_date="2018-05" gene 1..4945 /gene="LOC132935789" /note="repetitive organellar protein-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins" /db_xref="GeneID:132935789" CDS 231..4403 /gene="LOC132935789" /codon_start=1 /product="repetitive organellar protein-like" /protein_id="XP_060858392.1" /db_xref="GeneID:132935789" /translation="
MTWIKIEKKMKKKNKLSTRNIISSTYLEEYTGKWNTSTQLTTILHDKKAKKLYTTICDDKDKTEANLNKNALIKCILYSNASENEKELTILKKNKKRKRDKKQVQNNENLKTDKTMLKTSKLYTETIDDNDTDLNMEKTVDSNLNKDELTRIPIANASESDFLFKKKKKKKKSDRKMVQNDKDSTNSKATLNVGKYFDETVHDNYKHLDKDETRDSNLNKDELTRIPIANASESDFLFKKKKKKKKSDRKMVQNDKDSTNSKATLNVGKYFDETVHDNYKHLDKDETRDSNLNKDELTRIPIANASESDFLFKKKKKKKKSDRKMVQNDKDSTNSKATLNVGKYFDETVHDNYKHLDKDETRDSNLNKDELTRIPIANASESDFLFKKKKKKKKSDRKMVQNDKDSTNSKATLNVGKYFDETVHDNYKHLDKDETRDSNLNKDELTRIPIANASESDFLFKKKKKKKKSDRKMVQNDKDSTNNKATLNVGKYFDETVHDNYKHLDKDETRDSNLNKDELTRIPIANASESDFLFKKKKKKKKSDRKMVQNDKDSTNSKATLNVGKYFDETVHDNYKHLDKDETRDSNLNKDELTRIPIANASESDFLFKKKKKKKKSDRKMVQNDKDSTNSKATLNVGKYFDETVHDNYKHLDKDETRDSNLNKDELTRIPIANASESDFLFKKKKKKKKSDRKMVQNDKDSTNSKATLNVGKYFDETVHDNYKHLDKDETRDSNLNKDELTRIPIANASESDFLFKKKKKKKKSDRKMVQNDKDSTNSKATLNVGKYFDETVHDNYKHLDKDETRDSNLNKDELTRIPIANASESDFLFKKKKKKKKSDRKMVQNDKDSTNSKATLNVGKYFDETVHDNYKHLDKDETRDSNLNKDELTRIPIANASESDFLFKKKKKKNKGDKKMVQNDKDSTNSKATLNVGKYFDETVHDNYKHLDKDETEDSNLYKDSSALSDIEYVNVLLKTPLKKKTNSKIAIKEYTESSKYESIQTFLKNMEYLNKVITEEQPNEIYNGSAMIYTPYNSRISKVHEQYPELFQKLLEKKRKVTKKSIKVVNSKEVMSPKKRKRRTPDKEYSKNDPLQSVDTNVETYVGNNYNVEGGTKKLEFFDSLDDQTSEYCTMADTGMYFGQYSNQTANNAYGVHGHKNVLTGNTPLQCNVCFKTFTYRSILARHQIMHTGEKPYACNFCGRSFSQGSTLARHKRMHTGEKPYACNVCGRSFAQRSSLVTHNRTHTGEKPYACNVCGRSFAQRSILVTHTRTHTGEKPYACNVCGRSFFQRSNLVSHNRTHTGEKPYACNVCGRSFAQRSSLVTHNRTHTGEKPYACNVCGRSFSLGSTLAKHNRTHTGERPFKCGHCEKKFTSSGNCKRHTLSVHTKCF"
ORIGIN
atatttcccaaattcccaatgggcaatggctatcatttaattatgacgttttatctgtgatattagttttacaaaattaatttaattgttatatcgtgtactgtgtagaaatatacaagtttagaattgtatattacaaatatatatattttttttgtaatttatagtttcttttacattcgttatatagtgacaaaaatcaaattaatgccggctgattacaaattataatgacctggataaagattgaaaaaaaaatgaagaaaaaaaataagctatcaactagaaatataatttcatctacttatcttgaagaatatacagggaaatggaatacatcaactcagttaaccaccatattacatgataagaaggcaaagaagctttatactacgatatgtgatgacaaagacaaaacagaggctaatttaaacaaaaatgcattgataaaatgtattctttattctaatgcttcagaaaatgaaaaagaactgacaatattaaaaaaaaataaaaaaaggaaaagagacaaaaaacaggtacaaaataatgaaaatttaaaaaccgataaaactatgttgaagaccagtaagttgtatactgagaccattgatgacaatgacacagatttgaatatggaaaaaacagttgattctaatttaaacaaagatgaattgacaaggattcctattgccaatgcttcggaaagtgactttttatttaaaaaaaagaagaagaaaaagaaatcagatagaaaaatggtacaaaatgataaagattcgacaaacagtaaagctacattgaatgtaggaaagtattttgatgagaccgttcatgacaattacaaacatttggataaagacgaaacaagggattctaatctaaacaaagatgaattgacaaggattcctattgccaatgcttcggaaagtgactttttatttaaaaaaaagaagaagaaaaagaaatcagatagaaaaatggtacaaaatgataaagattcgacaaacagtaaagctacattgaatgtaggaaagtattttgatgagaccgttcatgacaattacaaacatttggataaagacgaaacaagggattctaatctaaacaaagatgaattgacaaggattcctattgccaatgcttcggaaagtgactttttatttaaaaaaaagaagaagaaaaagaaatcagatagaaaaatggtacaaaatgataaagattcgacaaacagtaaagctacattgaatgtaggaaagtattttgatgagaccgttcatgacaattacaaacatttggataaagacgaaacaagggattctaatctaaacaaagatgaattgacaaggattcctattgccaatgcttcggaaagtgactttttatttaaaaaaaagaagaagaaaaagaaatcagatagaaaaatggtacaaaatgataaagattcgacaaacagtaaagctacattgaatgtaggaaagtattttgatgagaccgttcatgacaattacaaacatttggataaagacgaaacaagggattctaatctaaacaaagatgaattgacaaggattcctattgccaatgcttcggaaagtgactttttatttaaaaaaaagaagaagaaaaagaaatcagatagaaaaatggtacaaaatgataaagattcgacaaacaataaagctacattgaatgtaggaaagtattttgatgagaccgttcatgacaattacaaacatttggataaagacgaaacaagggattctaatctaaacaaagatgaattgacaaggattcctattgccaatgcttcggaaagtgactttttatttaaaaaaaagaagaagaaaaagaaatcagatagaaaaatggtacaaaatgataaagattcgacaaacagtaaagctacattgaatgtaggaaagtattttgatgagaccgttcatgacaattacaaacatttggataaagacgaaacaagggattctaatctaaacaaagatgaattgacaaggattcctattgccaatgcttcggaaagtgactttttatttaaaaaaaagaagaagaaaaagaaatcagatagaaaaatggtacaaaatgataaagattcgacaaacagtaaagctacattgaatgtaggaaagtattttgatgagaccgttcatgacaattacaaacatttggataaagacgaaacaagggattctaatctaaacaaagatgaattgacaaggattcctattgccaatgcttcggaaagtgactttttatttaaaaaaaagaagaagaaaaagaaatcagatagaaaaatggtacaaaatgataaagattcgacaaacagtaaagctacattgaatgtaggaaagtattttgatgagaccgttcatgacaattacaaacatttggataaagacgaaacaagggattctaatctaaacaaagatgaattgacaaggattcctattgccaatgcttcggaaagtgactttttatttaaaaaaaagaagaagaaaaagaaatcagatagaaaaatggtacaaaatgataaagattcgacaaacagtaaagctacattgaatgtaggaaagtattttgatgagaccgttcatgacaattacaaacatttggataaagacgaaacaagggattctaatctaaacaaagatgaattgacaaggattcctattgccaatgcttcggaaagtgactttttatttaaaaaaaagaagaagaaaaagaaatcagatagaaaaatggtacaaaatgataaagattcgacaaacagtaaagctacattgaatgtaggaaagtattttgatgagaccgttcatgacaattacaaacatttggataaagacgaaacaagggattctaatctaaacaaagatgaattgacaaggattcctattgccaatgcttcggaaagtgactttttatttaaaaaaaagaagaagaaaaataaaggagataaaaaaatggtacaaaatgataaagattcgacaaacagtaaagctacattgaatgtaggaaagtattttgatgagactgttcatgacaattacaaacatttggataaagacgaaacagaggattctaatttatacaaagattcgtccgccttatcagatatagaatatgttaatgttttgttaaaaactcctttaaaaaagaagacaaattctaagattgcaataaaagaatatactgaatcgtcaaaatatgaatctatacaaacatttcttaaaaatatggaatacctgaataaagttataactgaagaacagccaaatgagatttacaatggttctgctatgatttacactccatacaattcaagaatttcaaaagtccatgaacagtaccctgaattatttcaaaaattattggaaaaaaaaaggaaagttacgaaaaaatctattaaggttgtaaatagtaaagaagtaatgtcaccgaaaaaacgtaaacgacggacgcctgataaagaatattcgaaaaacgatccccttcaatcagtggatacgaatgtggagacatatgttggtaataattataatgtcgaaggcgggactaagaaattagaattttttgattctttggacgatcagacgtcggaatattgcaccatggccgacacaggtatgtattttggccaatattctaatcaaacggctaacaacgcctacggtgtacatggtcacaaaaatgttctcactggaaacactcctctccagtgcaacgtttgctttaaaacgtttacctatagatccattttggctagacatcaaataatgcacaccggtgagaaaccatatgcgtgcaacttttgtggccgatcattttcgcaagggtcaactttggctagacataaaagaatgcacaccggtgagaaaccatatgcgtgcaacgtttgtggccgatcatttgcgcaaaggtcaagtttggtcacacataatagaacgcacaccggtgagaaaccatatgcgtgcaacgtttgtggccgatcatttgcgcaaaggtcaattttggttacacatactagaacgcacaccggtgagaaaccatatgcgtgcaacgtttgtggccgatcattttttcaaaggtcaaatttggtttcacataatagaacgcacaccggtgagaaaccatatgcgtgcaacgtttgtggccgatcatttgcgcaaaggtcaagtttggtcacacataatagaacgcacaccggtgagaaaccatatgcctgcaacgtttgtggccgatcattttctctagggtcaactttggctaaacataatagaacgcacaccggcgaaagaccattcaagtgcggtcattgtgaaaaaaagtttacatcaagcggtaactgtaaaagacatacactaagtgttcataccaaatgtttttaaattcgttactattattgttgtatgacccattactcaagaaaaataaactataaacatcaaattatgtatgaaaacgtccaatcatcattcattgcagtaagggttctcgacttagaaaacgctatcacagtatcacttcatcgtaaacgtttaaatacctatatgcttgggcataagcaaaaccactctgtcgacgacgatcgcccgttgtgtagtagcttcaatgctctctgtctggcgttgttgttgcgtatactttacattaatgattgtattgcttctccttcaactgtttaatagcaatgaaaatatttctattccagaatgcttttgtaataagcggatagcgagtattacctaatcgactaaaattatataatgtacatattagttataagttataaccttagactgtagtcctatttgattgtgtaataaataccacccaatcatattaaattcaaatgaaattcagtttttatagaattaggtttttgttatgtacatttattttatctatagacgaaagttgaataataaaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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