2024-11-01 07:55:41, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XM_060736104 718 bp mRNA linear INV 03-NOV-2023 DEFINITION PREDICTED: Ruditapes philippinarum uncharacterized LOC132746840 (LOC132746840), mRNA. ACCESSION XM_060736104 VERSION XM_060736104.1 DBLINK BioProject: PRJNA1033681 KEYWORDS RefSeq. SOURCE Ruditapes philippinarum (Manila clam) ORGANISM Ruditapes philippinarum Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Heteroconchia; Euheterodonta; Imparidentia; Neoheterodontei; Venerida; Veneroidea; Veneridae; Ruditapes. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_026856517) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_026571515.1-RS_2023_10 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 10/30/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..718 /organism="Ruditapes philippinarum" /mol_type="mRNA" /isolate="M1" /isolation_source="lagoon" /db_xref="taxon:129788" /chromosome="Unknown" /sex="male" /tissue_type="mantle" /dev_stage="adult clam" /geo_loc_name="USA: Puget Sound region, Pacific Northwest" /collection_date="2014-10" gene 1..718 /gene="LOC132746840" /note="uncharacterized LOC132746840; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:132746840" CDS 42..368 /gene="LOC132746840" /codon_start=1 /product="uncharacterized protein LOC132746840" /protein_id="XP_060592087.1" /db_xref="GeneID:132746840" /translation="
MKKRLLDLTLIVLIYSIIFDKGYCQEDIEQGVYHAEFQGRKCIAQMKPVEDPNMEYINHLEIEGYKFPFYCSRATEEATQNKDELLTEVVRENTGVDEKSTDTIKDEL"
polyA_site 718 /gene="LOC132746840" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN
gtacatatatcattcaaaaagtataaattactgtttcgaacatgaagaaacgtttactagacttaacgcttattgttttgatatattcaataatttttgataaaggttattgtcaagaggatatagaacaaggggtttatcatgctgagtttcaaggccggaaatgtattgcgcaaatgaaacctgttgaggacccgaacatggaatacataaatcatctcgagatagagggctacaaatttcctttctactgttctcgagctaccgaagaagcgactcaaaataaagacgagcttctgactgaggtggttagagaaaataccggagttgatgaaaaatcaacagatacaatcaaagatgaattatagcattgtgatatgacagaagaccggggagcatcgttatgagtggatactgtttgttagctaacattcactgtgtcaattatttctttttatttgactccttatataaatacgagggttgttcaaaaagtaataggactgcagctctactgttcacatttttaaatttacgtacacaattttacaagagacaaaatttaatatcggaacatgtcctctatatacactgaaaaaatcaatacataacaattctgtgaaaaatttaaaataataaacgtacgcgtgccggcgagcattaaaacacaataaacatgatgtcgcaaaagaaatacaaaataaagcattttcttaca
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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