LOCUS       XM_055800137            4200 bp    mRNA    linear   VRT 02-MAY-2023
DEFINITION  PREDICTED: Falco peregrinus NRDE-2, necessary for RNA interference,
            domain containing (NRDE2), transcript variant X4, mRNA.
ACCESSION   XM_055800137
VERSION     XM_055800137.1
DBLINK      BioProject: PRJNA962079
KEYWORDS    RefSeq.
SOURCE      Falco peregrinus (peregrine falcon)
  ORGANISM  Falco peregrinus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Falconiformes; Falconidae; Falco.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_073721) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_023634155.1-RS_2023_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/26/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4200
                     /organism="Falco peregrinus"
                     /mol_type="mRNA"
                     /isolate="bFalPer1"
                     /db_xref="taxon:8954"
                     /chromosome="1"
                     /sex="female"
                     /tissue_type="blood"
                     /dev_stage="adult"
                     /country="Qatar: Doha"
                     /lat_lon="25.286106 N 51.534817 E"
                     /collection_date="2020-02-16"
                     /collected_by="Farooq Omar Al-Ajli, Souq Waqif Falcon
                     Hospital"
     gene            1..4200
                     /gene="NRDE2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 mRNA, 6 ESTs, 5 Proteins"
                     /db_xref="GeneID:101918926"
     CDS             686..3493
                     /gene="NRDE2"
                     /codon_start=1
                     /product="nuclear exosome regulator NRDE2 isoform X3"
                     /protein_id="XP_055656112.1"
                     /db_xref="GeneID:101918926"
                     /translation="

MLNTDGILVCSKSSSSDPAAFVPVFQMEAEDPSDTTEVNPLGIYDPSTTVWLQGNGSKSTEPVNAQQAVQEPVINMNSILMTKVEEHNKKVRENPRDINAWMEFVSFQDELMRGPSPYASKGEQEVRRKSLKLILEKKLAILERAIESNPSNVDLKLARLKICAEFWEPPALIKEWQKLIFLHPNNPELWKKYLLFCQSQFTTFSVSKINSLYGKCLTTLAAVQDGSMVSHPLLPGTEEAMLAIFIQQCHFLRQAGHSEKAVSLFQALIDFIFFKPDSVKDLPTRGQVEFFEPFWDSGEPRIGEKGARGWKAWMHQQEKGGWIALKPDDDEDDEEIDEDQEIKDKTLPKWHIWLDVEYSREARHWLPWRPDKTKKEMEEDCEDPERQVLFDDLGPSLIQLSNPDLQRQLLYSFLQFLGVPCTSKLFPSNLYIAMDENNIFESVLSDEKPLTSVEFPLSGFNSIGHMDTMLRGRHHIGHYKEGEEFIQNVFHVLFLLFSGKEKSNLSICWLQYEISKVVQCLQAKKKKKLKAQGRKSKKLAKNLLKAPDNRNHLSLWKLYAYLEWLLGNIDDARKVFDTALCTAGTEGLKSPQICSLSLLYAQLEVELLESIEGAVMSRAVHILTKLAESGPYVPYSGQVLAVNVLKARKTYEHALQDYLSKPPVSDQVGDADQLVNLVGCYALFQYLTVGIDAAVLIYAQTSEKLEALGPQKCENTGENFGIRNFSTALEAVTLLHTNLLRFHMKISVYPLNPLREALTEALKRYPSNRSLWRSYIHIQRKSHSASKARRFFDGVTRSTNSLEPWLFAIQAEQMRKKLIENVQRADVGEIHSTIPETGLTNRIVALFEHAVQSENGTHCPLLWRMYLNFLTSLGKKEKSRGLFYKALQNCPWAKVLYMDAVEYFPDHLQETLDLMTEKELRVRVPVEELDLLLEV"

     misc_feature    941..1939
                     /gene="NRDE2"
                     /note="necessary for RNA interference; Region: NRDE-2;
                     pfam08424"
                     /db_xref="CDD:429988"
     polyA_site      4200
                     /gene="NRDE2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

agtagtggatgcaataagatcccgaattacagcttctgacaagagaggagctgctctgccagacagagagttggactggcttagtaacccaagcttctctacagaagatgcactattactgcatcagcgcactgcagaagctgtaaacctcagtcctgaaaaatcaccactaataaggactacttcaaggtcagagttgtcagaggaaagtgatacagatgagactctgaaacagtcaagtaagaaaagaaaaaagaaaaagaaaaaacatcaccactataagagggcaaaaaagaaaaccaaaggggactccagtaacagtgaatcagacctggacaccaagtacatcaaggacaaaaccacaggaagtgggagaaataacgaaaaggaagcagcagcaaatccagataagaaaacaccaaatcttaccagcagtcgcttgctttggcttgatgatatccaggctttcacagcagaaaccttcagaatagacaagaaaccagaccctgcaaactgggcctacaaatccctgtatcgaggggacatagcaagatacaaaaggagaggagagtcctgtcttggcatagatgcaaagaaacagtgtataacttgggacagttctgcatcaaaaaggaagcagttacagaggcgacctgagcgctacttcacaaagaacaatgtgaagatgctgaacacagatgggattcttgtttgcagtaaaagttcttcatctgacccagctgctttcgtaccagttttccaaatggaagctgaggatccttctgacacaacagaggtaaatcctcttgggatttatgatccatcaactacagtgtggctacaagggaatgggagcaagagtacagagcctgtaaatgcgcagcaagcagttcaagagcctgtgataaacatgaactccattctaatgacaaaagtggaagaacataacaagaaagtcagagaaaacccaagagatattaatgcttggatggaatttgtttcttttcaggatgaattaatgagaggacctagcccttatgccagtaagggagagcaggaagtaagaagaaaatcactgaagttaatcttggaaaagaaactggctattttagagagggcaattgaaagcaatccaagtaatgttgatctgaaacttgctaggctgaagatttgcgcagaattctgggaaccaccagctttgatcaaagaatggcagaagctaattttcttacatcccaataatccggagttgtggaagaaatatctactgttctgtcaaagtcagttcactaccttttctgtttcaaaaatcaatagtctctatggaaagtgtttgactacactggcagctgtacaggatggcagcatggtatcacaccctctactgcctggcacagaagaagctatgctggctatatttattcagcagtgccactttctgagacaggctggccattccgagaaagcagtgtctctgtttcaggctctgattgacttcatcttctttaaacctgacagtgtaaaagatctgccaacaaggggacaggtggaattctttgaacccttttgggatagcggggaaccacgaattggagaaaaaggagcaagaggctggaaagcatggatgcaccaacaagaaaagggtggctggattgctcttaagcccgatgacgatgaagatgatgaagagatagatgaggatcaagaaataaaggataaaactctcccaaagtggcatatttggttggatgtggagtattctcgtgaagcaaggcattggttaccttggaggccagacaaaaccaaaaaggaaatggaagaagattgtgaagatccagaaagacaggtattatttgatgatcttggaccatctttaatccagctttctaatccagatcttcagcgtcaactactctactcatttttgcaattcctgggagttccatgtacaagtaaactcttcccttccaacctctatattgccatggatgaaaataacatctttgagagtgtgctttctgatgaaaagccactgacttctgttgaatttccactttctggattcaacagtattggtcatatggacacaatgctacgagggagacatcacataggccactataaagaaggagaggagttcatacagaatgtttttcatgttctattcctgctattttcaggaaaggaaaaatccaacctgtccatttgttggttacagtatgaaatatctaaggtagttcagtgtctccaagcgaaaaagaagaagaagctgaaagcacaagggaggaagagtaaaaagttggccaagaatctccttaaagcacctgacaaccgaaaccacctttctctctggaaattgtatgcctacctggaatggctgcttggtaacattgacgatgccaggaaggtatttgacacagctctttgcacagcagggacagaaggattgaagagtccccaaatctgcagcctcagtctgctttatgctcagctggaagttgaactactagaaagtatagaaggagctgttatgtcacgtgctgttcatatattgaccaaattggctgaaagtggaccatatgtgccatatagtggacaagtgttagctgtaaatgtcttgaaagctcgtaaaacatatgagcatgcactgcaagattatttaagtaaaccaccagtttctgatcaggttggtgatgctgatcagctggttaacttggttggttgttacgcactgttccagtatttgactgttgggattgatgctgcagtattaatatatgcacagacttcggaaaaacttgaagctcttggtccacagaaatgtgaaaatactggagagaattttggcattcgaaatttttccactgctcttgaagctgtcacactgctgcatacaaatttgctcagattccacatgaaaattagtgtttatcctttgaatcctctgcgagaggcactaacagaggctctgaaacggtatcctagcaaccggtccctttggaggtcatatatccatatccaaaggaagtctcacagtgctagcaaagcacgaagattttttgatggtgtcacaaggtctactaactctttagagccatggctgtttgcaatccaagcagagcaaatgagaaaaaaactcattgagaatgtccagagggcagatgttggtgaaatacattctacgattcctgaaactgggttaacaaatcggattgtagctctatttgaacacgcagttcagagtgaaaatggtacccattgtccactgctgtggagaatgtatttgaactttctgacttcactaggaaaaaaggaaaaaagtagaggattgttttataaagcacttcaaaactgtccttgggcaaaggtgctctacatggacgcagtagagtacttccctgatcatctgcaagagacgcttgatctaatgactgaaaaagaattgagagtgcgggtacctgtggaagagctggatctactattagaggtttaaaagactgtagaagagtggctaaagtacagaaggtagttctgaagcaaagttagacctgtctcttttcaaacaggagctctgttgagaattgggtactatgtactttttttaaagcttttatataaattgctgtcaaaatggagttctgctagctgcaagtattctggaataaagtactgcattttgcccacaaaaatgcatccatttctttgaagtattgctggctgctacaggaggataccctcttagaaggagcctcctgttgaatgttgcccacatttcttattctgttgtttgaaattacattccctagagttcagcaggaattcagtacgtgccagctatggtttggtgagcagcacaggaaataaacatctgccaaatggatgctccactgttctccacttggcaggcttcagtaatttccttcagcttggtatgtgtgtgtgtgtatatgtaactaccaagtcaaacagccgttaaatctgtacaagcagttacatttgtacatatactgttagtaaaagctaagtctttgcttaagcaggcacctgttttggacttgtatgttttaacagatgaccattttaatataaatatttatgagaaatatacctgaatatttgaaaattcaaaaggaacttgaattatttatttcttaatttaatagaactgtgagtgtattaaaaatgaaagtgtatctataa

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