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Previous release (v1)
2026-10-06 02:22:04, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_050571486 852 bp mRNA linear INV 09-SEP-2022
DEFINITION PREDICTED: Adelges cooleyi aspartate and serine-rich protein-like
(LOC126837548), mRNA.
ACCESSION XM_050571486
VERSION XM_050571486.1
DBLINK BioProject: PRJNA877624
KEYWORDS RefSeq; includes ab initio.
SOURCE Adelges cooleyi (spruce gall adelgid)
ORGANISM Adelges cooleyi
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha;
Aphidomorpha; Phylloxeroidea; Adelgidae; Adelges; Gilletteella.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_026095916) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: Adelges cooleyi Annotation Release
100
Annotation Version :: 100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
ab initio :: 100% of CDS bases
##RefSeq-Attributes-END##
FEATURES Location/Qualifiers
source 1..852
/organism="Adelges cooleyi"
/mol_type="mRNA"
/isolate="19-005CV"
/isolation_source="galling 4th instar nymphs"
/host="Picea sp."
/db_xref="taxon:133065"
/chromosome="Unknown"
/tissue_type="whole body"
/geo_loc_name="USA: Idaho, Franklin county, ID-36 through
Emigration Canyon"
/collection_date="2019-07-23"
/identified_by="Carol von Dohlen"
gene 1..852
/gene="LOC126837548"
/note="aspartate and serine-rich protein-like; Derived by
automated computational analysis using gene prediction
method: Gnomon. Supporting evidence includes similarity
to: 3 Proteins"
/db_xref="GeneID:126837548"
CDS 1..852
/gene="LOC126837548"
/codon_start=1
/product="aspartate and serine-rich protein-like"
/protein_id="XP_050427443.1"
/db_xref="GeneID:126837548"
/translation="
MAPLERDPPKFLFDHITDINEDFLTDDEEELFPERLIYNDIDTRDRDTDDEIDINTDELNNYIPEIVLEVIRQWSTYFNSAVPPLVNNHDRKTEDSDDRETEDSDDKETEDSDDTETEDNDDTETEDSDDKETEDIDDTETEDNDDTETEDNDDKSIETDETDDRETEDNDDKSIETDETDDRETEDNNDESIETDETDKIHDDDEYSRNFMPTYSFDARLAYFNAIRPPVNERRSVESDSDDPQPCSSSGLKRPRSDSDDEQPRSTKRRRPTSYQSESEESE"
misc_feature 235..>630
/gene="LOC126837548"
/note="RNA polymerase sigma factor; Provisional; Region:
PRK05901"
/db_xref="CDD:235640"
ORIGIN
atggcaccgttagaaagagatccacccaaattcttatttgatcatataacagacataaacgaagacttcttgacggacgacgaagaagagttatttccagaacgccttatatacaacgacatagacacaagagatagagacacggacgatgagattgacataaacaccgacgagttaaataactatatacctgaaatagtattggaagtcattagacaatggagtacatactttaatagtgctgttccgccacttgtcaacaaccatgacagaaagacagaggacagcgatgacagagagacagaggacagcgatgacaaagagacagaggacagcgatgacacagagacagaggacaacgatgacacagagacagaggacagcgatgacaaagagacagaggacatcgatgacacagagacagaggacaacgatgacacagagacagaggacaatgatgacaagtcaattgagacagacgaaaccgacgacagagagacagaagacaacgatgacaagtcaattgagacagatgaaaccgacgacagagagacagaggacaacaatgacgagtcaattgagacagacgaaaccgacaaaatccacgacgacgacgaatattcccggaacttcatgcccacatacagcttcgatgcaaggcttgcatatttcaacgccattcgcccgcctgtcaacgaacgccgatcagttgagtcagactcggacgacccgcagccgtgctcatcatcaggtctgaagagaccgcgttcagactctgatgatgagcaacccaggtcaacaaagcggagacggccaacgtcgtaccagtcagaaagcgaagaaagcgagtag
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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