LOCUS       XM_049828887            3761 bp    mRNA    linear   VRT 27-FEB-2023
DEFINITION  PREDICTED: Accipiter gentilis NRDE-2, necessary for RNA
            interference, domain containing (NRDE2), transcript variant X2,
            mRNA.
ACCESSION   XM_049828887
VERSION     XM_049828887.1
DBLINK      BioProject: PRJNA862859
KEYWORDS    RefSeq.
SOURCE      Accipiter gentilis (Northern goshawk)
  ORGANISM  Accipiter gentilis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Accipitriformes; Accipitridae;
            Accipitrinae; Accipiter.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_064904) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_929443795.1-RS_2023_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/26/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3761
                     /organism="Accipiter gentilis"
                     /mol_type="mRNA"
                     /db_xref="taxon:8957"
                     /chromosome="25"
     gene            1..3761
                     /gene="NRDE2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins"
                     /db_xref="GeneID:126050686"
     CDS             65..3583
                     /gene="NRDE2"
                     /codon_start=1
                     /product="nuclear exosome regulator NRDE2 isoform X2"
                     /protein_id="XP_049684844.1"
                     /db_xref="GeneID:126050686"
                     /translation="

MALFPAFASAAEPGEPPAGSSEGSRKELDWLSNPSFSTEDALLLHQRATEVANLIPEKSPLIRTTSKSELSGESDTDESLKQSSKKRKKKKKKHHNYKKTKKKTKGDSSSSESDRDIKHIKDKAEGSGRNHEKEGAAILDKKTSNLTSSRFVWLDDIQAFTAETFRIDKKPDPANWAYKSLYRGDIARYKRRGDSCLGIDAKKQCITWDSSASKRKQLQRRPERYFTKNNVKMLNTDGIPVCNKSSPSDPTAFIPVFQMETDDPSDTTDMNPLGIYDPSTTVWLQGKGCKNTDYEPVNTQQTIQEPEININSILMTKVEEHNKKVRENPRDINAWMEFVSFQDELMRGPSPYASKGEQEVRRKSLKLILEKKLAILERAIESNPSNVDLKLARLKLCTEFWEPPALIKEWQKLIFLHPNNPELWKKYLLFCQSQFTTFSVSKINSLYGKCLTTLAAVQDGSMVSHPLLPGTEEAMLAIFIQQCHFLRQAGHSEKAVSLFQALIDFTFFKPDSVKDLPTRGQVEFFEPFWDSGEPRIGEKGARGWKAWMHQQEKGGWIALKPDDDDDDDEEIDEDQEIKDKSLPKWHIWLDIEYSREARHWLPWRPDKTKKESEEDCEDPERQVLFDDLGPSLIQLSNPDLQRQLLYSFLQFLGVPCTSKLFPSNLYIAMDENNIFESVLSDEKPLTSVSFPLSGFNSIGHMDTMLRGRHHIGHYKEGEEFIQNVFHVLFLLFSGKEKSNLSICWLQYEISKVVQFLQAKNKKQLKAQGRKSKKLAKNLLKEPDNRNHLSLWKLYAYLEWLLGNIDDARKVFDTALCTAGTGGCKSPQLCSLSLLYAQLEVELLESTEGAVISRAVHILTKLAESGPYVPYSGQVLSVNVLKARKTYEHALQDYLSKTPVSDQDQVSDANQLVNLVGCYALFQYLTVGIDAAVLIYAQTSEKLEAPGPQKCENTGENFGIQNFPTALEAITLLHTNLLRFHMKISVYPLNPLREALTEALKRYPSNQSLWRSYIHIQRKSHSASKARRFFDGVTRSTNSLEPWLFAIQAEQLRKKLTENVQRADVGEIHSTIPETGLTNRIVALFEHAVQSENGTHCPLLWRMYLNFLASLGKKEKSKGLFYKALQNCPWAKVLYMDAVEYFPDDLQETLDLMTEKELRVRVPMEELDLLLEV"

     misc_feature    554..832
                     /gene="NRDE2"
                     /note="MTR4-interacting domain (MID) found in nuclear
                     exosome regulator NRDE2 and similar proteins; Region:
                     NRDE2_MID; cd22200"
                     /db_xref="CDD:412062"
     misc_feature    order(554..580,587..592,602..607,611..613,617..661,
                     668..676,680..688,710..718,728..733,737..742,749..769,
                     788..799,809..832)
                     /gene="NRDE2"
                     /note="MTR4 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:412062"
     misc_feature    1022..2023
                     /gene="NRDE2"
                     /note="necessary for RNA interference; Region: NRDE-2;
                     pfam08424"
                     /db_xref="CDD:429988"
     polyA_site      3761
                     /gene="NRDE2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

cgccatcttgccccgccgctccgcggggcagttcgggcagatagtggtggcggtaagctgagacatggcgctgttcccggcttttgccagtgccgccgagcccggggagcccccagccggcagcagcgagggctccaggaaagaattggactggcttagtaacccaagcttctctacggaagatgcactattactgcatcagcgtgctacggaagttgcaaatctcatccctgaaaaatcaccactaataaggactacctcaaaatcagagttgtcaggggaaagtgatacagatgagagtctgaaacagtcaagtaagaaaaggaaaaagaaaaagaagaagcatcacaactataagaagacaaaaaagaaaacaaaaggcgactccagtagcagtgaatcggaccgggacattaagcacatcaaggacaaagccgaaggaagtggcagaaatcatgaaaaggaaggagcagcaattctagataagaaaacatcaaatcttaccagcagtcgctttgtttggcttgatgatatccaggctttcacggcagaaaccttcagaatagacaagaaaccagaccctgcaaactgggcctacaaatccctgtatcgaggggacatagcaagatataagaggagaggagactcctgtcttggcatagatgcaaagaaacagtgtataacttgggacagttctgcatcaaaaaggaagcaattacagaggcgacctgagcgctatttcacaaagaacaatgtgaagatgctgaacacagatgggattcctgtttgcaataagagttctccatctgacccaactgcttttataccagttttccaaatggaaactgatgatccttctgacacaacagacatgaatcctcttgggatttatgatccatcaactacagtgtggctacaaggaaaagggtgcaagaatacagactatgagcctgtaaatacgcagcaaacaattcaagagcctgagataaacattaactccattctaatgacaaaagtggaagaacataacaagaaagtcagagaaaacccaagagatattaatgcttggatggagtttgtttcctttcaggatgaattaatgagaggacctagcccttatgccagtaaaggagagcaggaagtaagaagaaaatcactgaagttaatcttagaaaagaaactggctattttagagagggcaattgaaagcaatccaagtaatgttgatctgaaacttgccaggctgaagctttgcacagaattctgggaaccaccagctttaatcaaagaatggcagaagctaattttcttacatcccaataatccagagctgtggaagaaatatctcctgttctgtcaaagtcagttcactaccttttctgtttcaaaaatcaatagtctctatggaaaatgtttgactacgttggcagctgtacaggatggcagcatggtttcacatcctctactgcctggcacagaagaagctatgctagctatatttattcagcagtgccactttctgagacaggctggccattctgagaaagcagtgtctctgtttcaggctctgattgacttcaccttctttaaacctgacagtgtaaaagatctgccaacaaggggacaggtggaattctttgaacccttttgggatagcggagaaccacgaattggagaaaaaggagcaagaggctggaaggcatggatgcatcaacaagaaaagggtggctggattgctcttaagcctgatgacgatgatgatgatgatgaagagatagatgaggatcaagaaataaaggataaaagtctccccaagtggcatatttggttggatattgaatattctcgagaagcaaggcattggttaccttggaggccagacaaaaccaaaaaggaatctgaagaagattgtgaggatccagaaagacaggtattgtttgatgatcttggaccatctttaatccagctttctaatccagatcttcaacgtcaactactgtactcatttttgcaattcctgggagttccatgtacaagtaaactctttccttccaacctctatattgccatggatgaaaataacatctttgagagtgtgctttctgatgaaaagccactgacttctgttagttttccactttctggattcaacagtattggtcacatggacacaatgctacgagggagacatcacataggccactataaagaaggagaggagttcatacagaatgtttttcatgttctgttcctgctattttcaggaaaggaaaaatctaacctgtccatttgttggttacagtatgaaatatctaaggtagttcagtttctccaagcaaaaaataagaagcaactgaaagcacaagggaggaagagtaaaaagttggccaagaatctccttaaagaacctgacaaccgaaaccacctatctctctggaaactgtatgcctacctagaatggctgcttggcaacattgatgatgccaggaaggtatttgacacagctctttgcacggcagggacaggaggatgcaagagtccccagctctgcagcctcagtctgctttatgctcagctggaagtggaactactggaaagtacagaaggagccgttatatcacgtgctgttcatatattgaccaaattggctgaaagtggaccatatgtgccctatagtggacaagtgttatctgtgaatgtcttgaaagctcgtaaaacatatgagcatgcactgcaagattatttaagtaaaacaccagtttctgatcaggatcaggtcagtgatgctaatcagctggttaacttggttggctgttatgcactgttccagtatttgactgttgggattgatgctgcagtattaatatatgcacagacttcagaaaaacttgaagctcctggtccacagaaatgtgaaaatactggagagaattttggcattcaaaattttcccactgctcttgaagctatcacactgctgcatacgaatttactcagattccacatgaaaattagtgtttatcctttgaatcctctgcgagaggcactaacggaggctctgaaaaggtatcctagcaaccaatctctttggaggtcatacatccacatccaaaggaagtctcacagtgctagcaaagcacgaaggttttttgatggtgtcacaaggtctactaactctttagagccatggctgtttgcaatccaagcagagcagctgagaaaaaaactcactgagaatgtccagagggcagatgttggtgaaatacattctactattcctgaaactgggttaacaaatcgaattgtagccctattcgaacatgcagttcagagtgaaaatggtacccattgtccactgctgtggagaatgtatttgaactttctggcttcactaggaaaaaaagaaaaaagtaaaggattgttttataaagcccttcaaaactgtccttgggcaaaggtactctatatggatgcagtagagtacttccctgatgatctgcaagagacacttgatctaatgactgaaaaagaactgagagtgcgggtacctatggaagaactggatctgctattagaggtttaaaagaagactgtagatgagtggagaaagtacagaagctagttccaaaactaacagttagacctgtctctcttcaaacaggaagtctgttgggacttgggtcatttttttggtgtttttttttgttttgttttgtttgtttgtttttttaagcttttatataaattactatcaaaatgga

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