LOCUS       XM_049626876            1422 bp    mRNA    linear   MAM 28-FEB-2023
DEFINITION  PREDICTED: Panthera uncia vimentin (VIM), transcript variant X2,
            mRNA.
ACCESSION   XM_049626876
VERSION     XM_049626876.1
DBLINK      BioProject: PRJNA861302
KEYWORDS    RefSeq.
SOURCE      Panthera uncia (snow leopard)
  ORGANISM  Panthera uncia
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae;
            Pantherinae; Panthera.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_064809) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_023721935.1-RS_2023_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/27/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1422
                     /organism="Panthera uncia"
                     /mol_type="mRNA"
                     /isolate="11264"
                     /db_xref="taxon:29064"
                     /chromosome="B4"
                     /sex="female"
                     /tissue_type="Tissue Culture"
                     /dev_stage="adult"
                     /collection_date="2000-05-31"
     gene            1..1422
                     /gene="VIM"
                     /note="vimentin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 9 Proteins"
                     /db_xref="GeneID:125919995"
     CDS             127..1407
                     /gene="VIM"
                     /codon_start=1
                     /product="vimentin isoform X2"
                     /protein_id="XP_049482833.1"
                     /db_xref="GeneID:125919995"
                     /translation="

MSTRSVSSSSYRRMFGGPGTGSRPSSSRSYVTTSTRTYSLGSALRPSTSRSLYASSPGGPYATRTSAVRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDKVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDEEIQELQAQIQDQHVQIDVDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIALPLPNFSSLNLRET"

     misc_feature    166..429
                     /gene="VIM"
                     /note="Intermediate filament head (DNA binding) region;
                     Region: Filament_head; pfam04732"
                     /db_xref="CDD:428095"
     misc_feature    430..1356
                     /gene="VIM"
                     /note="Intermediate filament protein; Region: Filament;
                     pfam00038"
                     /db_xref="CDD:425436"
ORIGIN      

ggatcccccgcgccagagacgcagcagcgctcccaccgcccacacccaccgcgccctcgctcgcctgtcctccccgagccagtccgcgccgccgcagccgcccagcccaccgccaccgtctcagccatgtccaccaggtctgtgtcctcgtcctcctaccgcaggatgttcggcggccccgggaccgggagccggccgagctccagccggagctacgtgaccacgtcaacccgcacctacagcctgggcagcgcgttgcgccccagcaccagccgcagcctgtacgcctcgtccccgggcggcccgtacgccacgcgcacctcggcggtgcgcctgcggagcagtgtgcccggtgtgcgtctgctgcaggactcggtggacttctcgctggccgatgccatcaacaccgagttcaagaacacccgcaccaacgagaaggtggagctgcaggagctgaacgaccgcttcgccaactacatcgacaaggtgcgcttcctggagcagcagaacaagatcctgctggccgagctcgagcagctcaagggccagggcaagtcgcgcctgggggacctctacgaggaggagatgcgggagctgcgccggcaggtggatcagctcaccaacgacaaggcccgcgtcgaggtggagcgcgacaacctggccgaggacatcatgcggctccgggagaagttgcaggaggagatgcttcagagagaggaagccgagagcaccctgcaatctttcagacaggatgttgacaacgcttctttggcacgtcttgaccttgagcgcaaagtggaatccttgcaggaagagattgcctttttgaagaaactacacgatgaggaaatccaggagctacaggctcagatccaggaccagcacgtccaaatcgacgtggatgtttccaagcctgacctcaccgctgccctgcgggatgtacgccagcaatatgaaagcgtggctgccaaaaaccttcaggaggccgaagaatggtacaagtccaagtttgctgacctctctgaggctgctaaccggaacaatgatgccctgcgccaggcgaagcaggaatcaaatgagtaccggagacaggtccagtccctcacctgcgaagtggacgccctcaaagggactaacgagtctctggaacgccagatgcgtgaaatggaagagaactttgccgtcgaagctgctaactaccaagacactattggccgcctgcaggatgagattcagaacatgaaggaggaaatggctcgtcaccttcgcgaataccaagacctgctgaatgttaagatggctcttgacattgagatcgccacctacaggaagctgctggaaggcgaggagagcaggatcgctctgcctcttcccaacttttcttccctgaacctgagggaaacatgatcttgtctaatcctc

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