LOCUS       XM_049596947            3822 bp    mRNA    linear   VRT 23-JUL-2022
DEFINITION  PREDICTED: Epinephelus fuscoguttatus NRDE-2, necessary for RNA
            interference, domain containing (nrde2), mRNA.
ACCESSION   XM_049596947
VERSION     XM_049596947.1
DBLINK      BioProject: PRJNA859906
KEYWORDS    RefSeq.
SOURCE      Epinephelus fuscoguttatus (brown-marbled grouper)
  ORGANISM  Epinephelus fuscoguttatus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae;
            Epinephelinae; Epinephelini; Epinephelus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_064765) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: Epinephelus fuscoguttatus Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3822
                     /organism="Epinephelus fuscoguttatus"
                     /mol_type="mRNA"
                     /db_xref="taxon:293821"
                     /country="China"
                     /collection_date="2018-12"
                     /linkage_group="LG14"
                     /note="scaffold1"
     gene            1..3822
                     /gene="nrde2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein"
                     /db_xref="GeneID:125901303"
     CDS             16..3591
                     /gene="nrde2"
                     /codon_start=1
                     /product="nuclear exosome regulator NRDE2"
                     /protein_id="XP_049452904.1"
                     /db_xref="GeneID:125901303"
                     /translation="

MALFPAFAGVDSNKVEDSSKELDWLTNKSFKTGDALALHSRLFETSERPKEKESSVGRELSSAEEGEEEEGNVPPKKKKKKSEKKRKKKKKHKKKSGRYSDSSRSDSEIIFPSDLKREQEADSPQAAPLACRFSWLDDLQAPTEQPFCVDCKADPANWTYKSLYRGDVARYKRKGNSCLGLDPRRQAVSWAESESNKKQKGGDKSKAADRYFSTVSRQLLRSELPVPTLPTVPECRDVISPTSFLPLGDNEENKRGGMALWLQGKGQQEQTEQQKQDTETGQTAALLTGRTEEFNRRLREQPTDTQLWLQFIQYQDELSATSFGGEEEQQGSNSADRCKSSYRALLEKKLSIAERAVATNHSCIALQLERLRICQELWEPSLLAKEWKKLVFLHPNSAPLWREYLLFTQSYFSNFTVSKVNSAYGKCLSTLSAVRDGSMVSHPALPGLEEDMLDIFIQQCHFLRQSGHSEKAISLFQAMIDFTFYKPDSVRELSTKQQVEFFEPFWDSGEERVGELGARGWKAWMLQQERGGWLQPNAEEEEEEEEDEEEVKDRSQPRWTVWLDVETSREAAHWLPWRPDKAKGQSEEDCEDPDRQVLFDDIGPSLICLSTPELRLCLLLHFFSFLGLPVDSVLSAAPCQLGLLLENLSLLTQGNELRHPLTSHDLPEPGVNSVGHMTTLQGTRKCVGLGKQGERFVTNVISMVQAVLPVHHRAALSLSWMQYEKLKVWRCLRGSNKKRLRSQGKRSKRVAKQLLKEPDNRSSLVLWREYAHLEWMLGNLDEARKVFSTATAIGGTKGLKSPTLCELCLLWAQLEVEEGAGERGGGQTDVTMSPAVCILTRLAEGTSSSSSSSSQSLSPVSILKARKLYEQALTAGLSALDQNPHNPQANRKAGHEDLLGEKLRLRGLIGCYTLFQYLTMGIQAANAIYSQARGRMEELHSTLTLDKQLNSNEKANLASTDASQSATDSSHSSRHFANRLASECEALAVQQAVLLRYHNSISVFPLATLRQTLTCALPTWPSSAPLWSIYVQVENRYHSAGRARRFFHSVTRDNSSVVPRLFAIVAEQQRKQLVDAAQRSCSHDAALPILPENGLSNRIRGLFESAIATEMGSHCPLLWRMYMHFLVSEGRVDQAKGIFYKALQNIPWAKGLYMDAVHLFPEHLQEFVDLMTEKELRLRLPLEELDILLED"

     misc_feature    451..762
                     /gene="nrde2"
                     /note="MTR4-interacting domain (MID) found in nuclear
                     exosome regulator NRDE2 and similar proteins; Region:
                     NRDE2_MID; cd22200"
                     /db_xref="CDD:412062"
     misc_feature    order(451..477,484..489,499..504,508..510,514..558,
                     565..573,577..585,607..615,637..642,646..651,658..678,
                     700..711,733..762)
                     /gene="nrde2"
                     /note="MTR4 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:412062"
     misc_feature    892..1896
                     /gene="nrde2"
                     /note="necessary for RNA interference; Region: NRDE-2;
                     pfam08424"
                     /db_xref="CDD:429988"
     polyA_site      3822
                     /gene="nrde2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

ttatatgcgaccatcatggctctgtttccagctttcgcaggagtcgacagtaacaaagttgaagattcgtctaaagaattagactggctgaccaacaagagttttaagactggagatgccctcgctctacacagtcgtttgtttgagaccagtgagaggccgaaagagaaggaatcaagtgtaggcagagagctgagctctgcggaggagggggaagaggaggagggtaatgtgccacccaaaaagaagaaaaagaagagtgaaaagaagagaaaaaagaagaaaaaacataaaaagaaaagtgggagatattcggacagcagtaggtctgactctgaaatcattttccccagtgacctcaaaagggagcaagaggcagacagtccccaggctgctccgttagcatgtcgtttctcctggttggatgacctccaggcgccaacagagcagccgttctgtgtggactgtaaagcagaccctgccaactggacgtacaagtccctgtacagaggagacgtagccaggtataagaggaaaggcaactcctgcttgggtctggaccctcgcagacaggcagtcagctgggcggagtccgagtcaaataagaaacagaaaggcggggacaagagtaaagcagcagacagatacttctcaacagtcagtcggcagctgctgagatccgagctccctgttcctacgttacctactgttcctgagtgcagggatgtcatcagccccacctcctttctcccgctgggggacaatgaagagaacaaacgaggagggatggccctgtggctgcaggggaaggggcagcaggagcagacagagcagcagaagcaggacaccgagacgggacagactgcagcgctattgaccggaaggactgaagagtttaacagacggctcagagagcagccaacagacacgcagctgtggttacaattcatacaataccaggatgagctcagtgcaacatcgtttggaggcgaggaggagcaacagggcagcaattcggctgatcgttgtaagtcctcctaccgagcactcctggagaaaaagctgagcatcgcagagcgtgcagtggccaccaaccacagctgcatagctctgcagctggagaggctcaggatctgccaagagctctgggagccctcacttctggctaaagaatggaagaaactggttttcctccatcccaacagtgcccccctgtggagggagtatttgctgttcacccagagctacttcagcaactttactgtgtcaaaggtcaactctgcatatgggaagtgtctaagcacgctcagcgcagtgcgtgacggcagcatggtctctcacccggccctgccggggcttgaggaggatatgttggatatcttcatccagcagtgtcatttcctgcgtcagtctggtcactcagagaaggcgatttctctgtttcaggccatgatcgactttacattctataaacctgacagtgtacgagaactctccaccaagcagcaggtcgagttctttgagccgttctgggacagtggggaggagagggttggagagttgggagccagaggttggaaagcctggatgctccaacaagagcgaggagggtggctacagcccaatgcagaagaagaggaggaggaggaagaggatgaggaggaggtaaaggaccggagccagcccagatggacagtctggttggatgtggagacgtctcgtgaagcagctcactggctgccctggaggcctgacaaagccaagggccaatcagaagaggactgtgaggacccagacagacaggtgttgtttgatgacataggtccgtccctaatttgtctgtctacaccggagctccggctctgtcttcttctccatttcttttcattcctggggctgcctgtggactctgtgctctctgctgccccctgtcagcttggcctgctgctagagaacctctctctactcactcagggtaatgagctcaggcatcctctgacctcccacgacctacctgaacctggggttaactctgtaggtcacatgaccaccctccagggaacaaggaagtgcgtggggcttgggaagcagggtgagaggtttgtcaccaatgtgatcagtatggtccaagctgtccttcctgtccaccaccgagctgccctgtcactcagctggatgcagtacgagaaactcaaggtctggcgctgcttgcgtggcagcaacaaaaagcgtcttcgttctcagggtaaacgcagcaagcgggttgccaagcaactactcaaggaacccgacaaccgctcatctttggtgctgtggcgggaatacgctcacctggagtggatgctgggcaacctcgacgaggctcgcaaagtcttctctacggccacagcgatagggggaaccaaaggtctgaagagccccaccctctgtgagctgtgtctgctgtgggcccagctggaggtggaggaaggggccggtgagcgagggggaggacaaaccgatgtcaccatgtccccagctgtgtgtatactaaccaggctagcagaaggaacttcttcatcgtcctcttcatcctcccagtcactctctccggtttccatcctgaaagccaggaagttgtatgaacaggctctgactgctggcttgtcagccctggaccaaaacccccacaaccctcaggccaacagaaaagcaggccatgaggacctgctcggagagaagctaaggctgcgaggcctaataggctgctacactctgttccagtacctcacaatgggcatccaagcggctaatgccatctacagccaggctagagggaggatggaggaactgcacagcacgctaacacttgacaagcagcttaacagtaatgagaaagctaaccttgctagcacagatgctagccagtctgcaactgattctagccatagcagcaggcactttgctaacaggctagcttctgaatgtgaggcattagcagtgcagcaggcagtgctgctcaggtaccacaacagcatcagtgtgtttccactggcaacactaagacagacgctgacctgtgccctccccacctggcccagcagcgcccctctttggagcatatatgtacaggtggagaaccgttaccatagtgctggccgggcgcgtcgcttttttcactctgtaaccagggacaacagcagtgtggtgccgcgcctctttgccattgttgctgaacaacaaaggaagcagctggtggacgctgctcagaggtcttgtagccatgatgctgccttgcccatcctgccagagaatggcctcagcaaccgtatccgtggactgtttgaaagtgccatagcaacagagatgggttctcactgtcctttactttggaggatgtacatgcacttcctggtgtcagaggggagggtagatcaagccaaagggatcttctacaaggccttacagaatattccctgggctaagggtttgtacatggacgcagtgcacctgttccctgaacatctgcaggagttcgtagatctgatgacggagaaagaactccgactcagactgcccttagaagaactggatatactgctggaggactgaacacacacagatatcattcaagaacttgtgtttgctttattgccaacttgctactatcagcacacttgatggcagagcaggagaatgcaaaaacttgggacgcttacacacacatatctgcaatattaaacagtgacgttgcagtgatcatatgggttcagggccatcctttgtacataatgtctttattttcacagcaaaacactagttaataaaaatgtgattctcatt

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