LOCUS       XM_049113414            6131 bp    mRNA    linear   MAM 15-JUL-2022
DEFINITION  PREDICTED: Canis lupus dingo NRDE-2, necessary for RNA
            interference, domain containing (NRDE2), transcript variant X3,
            mRNA.
ACCESSION   XM_049113414
VERSION     XM_049113414.1
DBLINK      BioProject: PRJNA477859
KEYWORDS    RefSeq.
SOURCE      Canis lupus dingo (dingo)
  ORGANISM  Canis lupus dingo
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae;
            Canis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_064250) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: Canis lupus dingo Annotation Release
                                           102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6131
                     /organism="Canis lupus dingo"
                     /mol_type="mRNA"
                     /isolate="Sandy"
                     /sub_species="dingo"
                     /db_xref="taxon:286419"
                     /chromosome="8"
                     /sex="female"
                     /tissue_type="muscle"
     gene            1..6131
                     /gene="NRDE2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 14 long SRA reads"
                     /db_xref="GeneID:112656873"
     CDS             972..3785
                     /gene="NRDE2"
                     /codon_start=1
                     /product="nuclear exosome regulator NRDE2 isoform X2"
                     /protein_id="XP_048969371.1"
                     /db_xref="GeneID:112656873"
                     /translation="

MNMDGVAVGSKNEPPSSEPISFIPVKGLDEVVPPVTTWLNPLGIYDQSTTQWLQGQGPSEPESKQPDSQTDRESALLKAKVEEFNRRVRENPRDIQLWMAFVAFQDEVMKSPGLYAIEEGEQEKRKRSLKLVLEKKLAILERAIESNQSSVELKLAKLKLCTEFWEPSTLVKEWQKLIFLHPNDTALWQKYLLFCQSQFSTFTVSKIHSLYGKCLSTLSAVKDGSILSHPALPGTEEAMFALFLQHCHFLRQAGHSEKAVSLFQAMVDFTFFKPDSVKDLPTKGQVDFFEPFWDSGEPRAGEKSARGWRAWMHQQERGGWVVIGADDEDDEPEDEDQEIRDKSLPKWQIWLAAERSRDQRHWRPWRPDKSKKQTEEDCEDPERQVLFDDISPSLIQLSSPDLRFQLVAAFLQFLGVPSDLSPPASCLYLAMDENSIFDNGFYDEKPLTSLNLSFSGISCVGRSDPLGCRRWTRGHNREGEEFIRNIFHLVMPLFSGQERSQLCFSWLRYEMAKVIWCLHTKNKKRLKSQGKNCKKLAKNLLKEPENRNNLCLWKQYAHLEWLLGNTEEARKVFDSALSAAGSRELRDWEVCELSLLYAELEVELLPDPRGASAARAVHVLTRLTESGPYGPYSGPVLAVHILKARKAYEHALQDCLGESWVCSPAPTAPAAPCHRLVSLVKCFMLFQYLTVGIDAAVRVCEQVYAKLKGSTSSGGSSPEDAGSAQSPSSVLEAVMLMHTSLLRFHMKVSVYPLAPLRQALSEALQLYPGNQVLWRSYVQIQSKSPTASKTRRFFDAITRSTKPLEPWLFAIEAEKMRKTLVESVQRVDGRDVHTTIPETGLTHRIKALFENALRSDSGSQCPLLWRMYLNFLVSSGNRERSKGVFYKALQSCPWAKVLYLDAVQHFPEEMQEILDLMTEKELRVRLPMEELELLLED"

     misc_feature    1218..2216
                     /gene="NRDE2"
                     /note="necessary for RNA interference; Region: NRDE-2;
                     pfam08424"
                     /db_xref="CDD:429988"
     polyA_site      6131
                     /gene="NRDE2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

ctccgccacgtccccctgagaaacagacattcacattccggggagagtcctggtgcaaaaggctaggtgttcccactgcatccctcctggcgttttcccccgttttactgaattctgaactgtccgtaatcattactgatctggtcctggtaaggatttgagttgacctttgccttggaataaagtaggaagagtgccatgcagataatgagtttataatgtgagaattgccacaatagccccatgttgcagagacacttccggaaaaccagctccttagttgaaggagtgaagagtagcaccatggtgtggtggggagcaccgatcggggtgcagaattagactggctgagcaacccgagcttttgtgttggagccataacctctctgagccaacaacctgaagaggtcactgccttggtttctgaagggtccccactgaccaggagtcctctgaaatcagaaccctcagatgaaagtgacagtaacaaaaagcccaaacaaacaagcagaaaaaagaagaaagagaaaaagaagaagaggaagcatcaccacaagaaaatcaagagaaaacatgggcagaccagtagcagtggatctgagccagatagtgagcctgatagggacaaaaattccagaagcattggagatagtaaaaaggaatcagagaaaccaagtcgagaagataatgctgctgctgctgctgctattgggcatcgcttggtttggcttgaggacattcaggctctgaatggaggagaaaccttcagaacagataagaagccggatcctgcaaactgggaatataagtctctctacagaggagacatagcaagatacaagaggaaaggagactcctgccttggcattaaccccaagaagcagtgtatatcctgggagggggcttccacggaaaagaagccttcgcacaagcacgttgagcgctattttacgaagaagagtgtggtattaatgaacatggatggagttgccgttggcagtaagaacgaacctccctcatctgagccaatctcgtttatcccagtgaagggcctggatgaggtggttcctcccgttacaacctggttgaaccctctggggatttacgatcagtccaccacgcagtggttacaaggacagggtccttcagagccagaatcgaagcagccagactcacagacggacagagagagcgcactactcaaggccaaggtggaggagttcaacaggagagtccgggagaacccccgggacattcagctctggatggcgtttgttgcttttcaggacgaagtcatgaaaagccctggcctgtatgccatcgaggagggagagcaggagaagcggaagcggtctctgaagctggttctggagaagaagctggccatcctggagcgggccattgagagcaaccagagcagcgtggagctgaagctcgccaaactgaagctctgcacggagttctgggagccctccaccctggtcaaagagtggcaaaaactgatattcttacatcccaacgatacagccctttggcagaagtaccttttattttgccagagccagtttagcaccttcaccgtgtcaaagatccacagtctttatggaaaatgcctgagcaccttgtctgcggtgaaggatggcagcatcttatcgcaccctgccttgccgggcaccgaagaggcaatgtttgcgctctttcttcagcactgccacttcctgcggcaggccggtcactcagagaaggcggtctctctgttccaggccatggtggacttcaccttcttcaaacccgacagcgtgaaagacctgcctaccaagggacaggtggacttctttgagcccttctgggacagcggggagccccgggccggggagaagagcgcccgaggctggagagcatggatgcaccagcaggagcgagggggctgggtggtcatcggtgcagatgatgaggatgatgaaccagaagacgaggaccaggaaataagagataagagcctgcccaagtggcagatctggcttgccgccgagcggtcccgagaccagaggcactggcggccatggcgccctgataagtccaagaagcaaactgaggaagactgtgaggaccctgagagacaggtgctgttcgatgacatctcgccatctctgatccagctctccagcccagatcttcggtttcagctggtcgcagcctttctgcagttcctgggcgtgccctctgacctcagccccccagcctcctgcctctacctggccatggatgagaacagcatctttgacaatgggttttatgatgaaaagccgttgacttctctcaacctttccttttctggcatcagctgtgtgggccgctcagacccactgggctgccggcgctggacccggggtcacaatcgagagggcgaggagttcatccgcaacatctttcaccttgtgatgcctctgttttcaggccaggagaggtctcagctctgcttctcctggctacggtacgagatggcgaaggtcatctggtgtcttcacactaaaaacaagaaaaggttgaagtcgcaaggaaagaactgcaaaaaactagccaaaaatctccttaaggagccagaaaaccgcaacaatctctgcctctggaagcagtatgcgcacctggagtggctgctgggcaacacggaggaggcccggaaggtgttcgacagtgcgctcagcgcggcagggagcagggagctgagggactgggaggtgtgtgagctcagcctgctgtacgccgagctggaggtggagctgttgccagacccgaggggggcctctgcggcccgcgccgtccacgtgctgaccagactgaccgagagtggtccctacgggccctactctgggccagtcttggccgtccacatcctgaaagctcggaaggcatacgaacatgcgctgcaggactgtctgggggagagctgggtctgcagtcccgcccccaccgcccctgcagcgccctgtcaccgcctcgttagcctggtgaagtgcttcatgctcttccagtacttgactgtggggatcgacgccgctgtgcgggtatgcgagcaggtgtacgcaaaactgaagggctccacttcctccggtggctccagccccgaggacgcaggcagcgcacagagcccgagcagcgttcttgaggctgtcatgctgatgcacaccagcctgctccgattccacatgaaggtcagcgtttaccctctggctcccctgcggcaggcactctcggaggccctgcagttgtatccgggcaaccaggttctttggaggtcctatgtgcagattcagagtaagtcccccacagccagtaagaccagaagattcttcgatgccattaccaggtctaccaagcccttggagccttggttgtttgcgattgaagccgagaagatgaggaagacgttggtggaaagtgttcagagggtggatggcagagatgtccacaccacgattcccgagactggcctgacgcatcggatcaaagccctgtttgaaaatgccttgcggagtgacagcggcagccagtgccccttattgtggagaatgtatttgaatttcttggtttcctcaggaaacagagagaggagcaaaggcgtgttctacaaagccctgcagagttgtccttgggcaaaggtgctgtacctggacgctgtgcagcacttccctgaggagatgcaggagatcctggacctgatgacagagaaggagctccgggtgcgcctgcccatggaggagctcgagctcctgctcgaggactagagcccaggcaggagggtgccgacgtggaccatgggcctgagtgtgcttgcaagacctctgcctttgaagtttctgatcttagtgtttgtacctaggctatccgtgtcttacctcttgcacattttgggatgtgcagacaacctagaagcttctgtttgcatattatatatgtgaccatgtggacgtgtaggtgagaaccgtgcccagtgatactgaatgtcccacggtggcccggttggtcccacccttcctccgcccagccagtgtgccctgtgggttggcccccttggtggtcctgcccggggtctctgggccttgcggtgatgccagggaagctctggttactcaaccctagaaccggtccccaggctggtgaggagagcagattgcccatctcctcgggccagagcaaagcttgggtgctctggcctctacccagcgtacccctaagccccccttcctgccactgcccagctgcagaccagcagtgtctgggtgcctgttagggacgcagcctcgcaggtgcacctcagcccagctgccagtctacaggtgaccaggagccctgggggctcgggtgcacccacgtgtggcaagccctgcccaagggaagggccctgctgcagaggggcaggcggccacgtgaggagagtgcagacccagccctgcccgagatgggccacgtccctgattctgagggctgtgagtggagtgaaatgtaaatacccacgttcagaccactttcttctgaaaaggacctgccttgcagttattagctcttaaagcagtttcctcccagttaattattctgaggtcctgctctaaaaaacccaaaaaaaacccaaaaacctaaaagccatgatgtctgtaattgctgaagttgtatttctttggcatcccatgcagaaaagccagtgtgtggctagagagggatggacaccggggagacgggcggcctgagtggccacttgcctcagctgccccacctccttcccagcttgcacatggaagtgcccagaacggggagaagtgcggcagtagatggggaaggggaggctcgcactggtctgaaggccctggagatggaggaggttcctgaatggaaggaagcacgaggggtggcagggcaggggggccctcaggcggccgcgggttccccgcaggagcaccacactttgctcctgccccagggtgccaagacgccgtgtgaggtcacctgatctgcagaccttccagcgccgaaagctgtttccttaaagccatggccaccctctcagcctttgttgctgagacagtggagacacttctccgtgagctgctgtcagctgggcaagaggtgtggagtctgcatccagtcctcacccaggagcctccacctgcttgctgctgctgagtgccagtgtggaggctgcagaaacaggatgaactgctggagggggagcacgctttattggggacagagcactgcacgtgacccacagaggaaggcagcccagggggtgtcctacacatcacgcgcaaaaaggtacacgggaggttttgctaagaaagatcaactggaacatggtttcctccgggggcttcccccacctcctccctcggaggggtcaggacacgcccaaccatctccttgaaggcagctctggtccgctagagatacagtccctcgggggtgccctcttgttttttataaagaacattttctttagatttcttgaagtcttcatttgttactttcatccgacgctctctcaaggccatcagaccagcctctgtgcagatggcctgtaagaaagaatggtatgttcagaaagggaaatactttttatttgcattctaacaactcgagagcgactttgagtgaggcgtgagacgcgcagactaaacaaactgcttaagccatttggggaaaaaagatctttttgaatgttttacacattgtaattattttctcagaggatcagaagtggctttgaggggaggacagactccggttctaaccagcgggtgacctggtagggaagttctcaatgtgcagggagcaatgttcccaggccacggaggcatttacaccagagagcatccatttcatttacggtcatgagagaaaaggcgtaaatctcaggacaatatttatggtgatacgtttattttctcagtcatcacttgtcaaaagtaaaactagaacccaggcaacatgacaggacaaaaacacagtcctgacactgaagtttctatctggttttggccttcaggatatttcaaatggtttagcaaaaaagaaaatgttatttgtgaacaaaaagataaggcaaagcaataaaatggtaacttttgataaatcga

//