LOCUS       XM_048974718            3674 bp    mRNA    linear   VRT 12-JUL-2022
DEFINITION  PREDICTED: Brienomyrus brachyistius NRDE-2, necessary for RNA
            interference, domain containing (nrde2), mRNA.
ACCESSION   XM_048974718
VERSION     XM_048974718.1
DBLINK      BioProject: PRJNA854133
KEYWORDS    RefSeq.
SOURCE      Brienomyrus brachyistius
  ORGANISM  Brienomyrus brachyistius
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala;
            Osteoglossomorpha; Osteoglossiformes; Mormyridae; Brienomyrus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_064546) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: Brienomyrus brachyistius Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3674
                     /organism="Brienomyrus brachyistius"
                     /mol_type="mRNA"
                     /isolate="T26"
                     /db_xref="taxon:42636"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="skeletal muscle"
     gene            1..3674
                     /gene="nrde2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 5 Proteins"
                     /db_xref="GeneID:125707502"
     CDS             64..3486
                     /gene="nrde2"
                     /codon_start=1
                     /product="nuclear exosome regulator NRDE2"
                     /protein_id="XP_048830675.1"
                     /db_xref="GeneID:125707502"
                     /translation="

MALFPAFADVSNRNPSNENSSKDLDWLSNQSFRPHDALVLHQRALEQTTSEGQEVSQDGSLGPEWKDDVRSKRKKKKEKKKKRKKRKGSSGEDSGGSGYESDTVYPSDLLKQAKDAERQEDQAMSQGSFMWQDDLPAPSDRPFCIDKKANAGNWQYKSLYRGDIARYRRKGSSCLGLDPKTQAVSWAETKTSNAKRVARTVERYFSRVSRQQLGAAGRPELPGSRGSGPSLEAVRFIPVPPVLEEEGSMGTSMAPTWVNPLGVYDSSTSLWLQGKGQPESDGQKEESSSVTVGTGGGIGSSLAAKVEDFNRRLRENPADTPTWLEFVHFQDELTAALGSFSGSEGEAERRRKSLRMTLEKKVSILERALESNPSCVELKLARLRLGRELWDAATLIREWRQLVFLRPNEPRLWREYLLFIQGQFSTLTVPKVSAIYGKGLSTLASVLDGALVSHPVLPGTEEAMLGIFLQQCHFLRQAGHSEKAIALFQAQLDFNFFKPDTVKDMHTKQQVEFFEPFWDSGEPRVGEKGARGWRAWMHQQERGGWVVPGEPDDDDDDEEDEGSEVKDKTWPKWRIWLDVETSREASHWLPWRPEKAKGQSEEDCEDPDRQVLFDDVGPSLIRLVQPELRVQLLRSFLHFLGMPADGCPRGPSWNILLDDLSLLQEAPDTDRPLTSDLLPTGVSPLGHTTMLGAARRTVGLCKQGEEFIQLAVQQLWPLLSGPEKSQLSLCLLQYEKLKVLRCIHSKTKKQVRSQGKRSKRLAKRILKEECNRSDLALWREFGHLEWLLGNLEEARKVLDMALALGLVRGLRDPALCDLCLLYAQLEVEQGAGPAAGTASPALHLLSSLAEGGTYSHFSGQVPSVSVLKARRTYEQALAAGGGVGLVCCFALFQYLTVGVEAADQVYREAIERLEAAEDPHPQQDSLCQASSELETLSMSRASLLRYAMSSSICPMGRLRDALTSSISRFPGNQYLWQLYLLAESRYHSAGRSRRFTRSITQRSPGIVPWLFTIRAEQSLKMLVESVQKSDLYGDVQATLPESGLKHRIRALFESAVTGEHGARCPLLWKMYLHFLVSEREVDRGRGIFYKALQYVPWVKSLYMDAVLLFPDNVQEFLDLMQEKELRLRVPMEEVDILLED"

     misc_feature    487..783
                     /gene="nrde2"
                     /note="MTR4-interacting domain (MID) found in nuclear
                     exosome regulator NRDE2 and similar proteins; Region:
                     NRDE2_MID; cd22200"
                     /db_xref="CDD:412062"
     misc_feature    order(487..513,520..525,535..540,544..546,550..594,
                     601..609,613..621,646..654,664..669,673..678,685..705,
                     730..741,757..783)
                     /gene="nrde2"
                     /note="MTR4 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:412062"
     misc_feature    988..1986
                     /gene="nrde2"
                     /note="necessary for RNA interference; Region: NRDE-2;
                     pfam08424"
                     /db_xref="CDD:429988"
     polyA_site      3674
                     /gene="nrde2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

gcgtcgcgttctctctgacgtaaaaacggggcgactatttactagtggagacgccgtccagttatggcgctctttccagcttttgccgatgtgtcaaatagaaatcccagtaatgaaaattcttccaaagacctggactggctcagcaaccagagcttccggccccatgacgccctggttcttcaccaacgagctctggagcagacgacatccgagggacaggaggtctcgcaagatgggtctttgggtcctgaatggaaggatgatgtcagatctaagagaaagaaaaagaaagagaagaagaagaaaaggaagaagaggaaggggagcagcggagaggactcggggggcagcggctatgagtcggacacagtctatcccagcgaccttttaaaacaggctaaagatgccgagaggcaggaggaccaggccatgtctcagggatcttttatgtggcaggacgacctcccagccccctcagaccgccccttctgcattgacaagaaggctaatgccggcaactggcagtataagtccctataccgtggagacattgccaggtacaggcgcaaaggtagctcctgcctgggcctggaccccaagactcaggcagtgagctgggctgagaccaagacgtccaacgcgaagcgggtggcgcgaaccgtggagcgctacttctccagggtcagccgtcagcagctgggtgcggctggccggccagagctgcccggctcacgtggatcaggcccaagtctggaagcagtccgcttcattcccgtacctcctgttctcgaggaggaagggagcatgggaaccagcatggcccctacttgggttaatcccttaggggtgtacgactcgtccacctccttgtggctgcagggtaaaggccagccagagtcagacggccagaaggaagagtcctcctcggtcaccgtggggacgggtggaggtattggctcctcgctggctgctaaggtggaagacttcaaccggaggctgcgtgagaatcccgcggacacgcccacttggctggagtttgtccacttccaggatgagctgacggctgccttagggtccttctcagggtcagagggcgaggcggagaggcgtaggaagtctctgcggatgaccctggagaagaaagtgtctatcctggagagggcgctggagagtaacccgagctgcgtggagctgaagttggcacgactgcgtctgggccgggaactgtgggatgcggcgacgctgatccgggagtggaggcagctggtgttcctgcggcccaatgagccgcggctctggagggaatacctgctcttcatccagggccagttcagcaccctcaccgtgcccaaggtcagcgccatctacggcaagggcctgagcacgctggcgtccgtgctggatggggcgctggtgtcacacccggtcttgccgggcactgaggaagccatgctgggcatcttcctgcagcaatgccacttcctcagacaggcaggtcactcggaaaaggccatcgctctcttccaggcacagctcgacttcaacttcttcaagccggatacggtgaaggacatgcacaccaagcagcaggtggagttcttcgagcccttctgggacagcggggagcctcgtgtgggagagaaaggggctcgtggctggagggcgtggatgcaccagcaggagagggggggctgggtcgtccccggagagccagatgacgatgacgatgatgaggaggacgaaggatcagaagtgaaggacaagacctggcccaagtggcgcatctggctggatgtggagacatcccgagaggccagccattggctaccttggaggccggagaaggccaagggccaatcggaagaggactgtgaagacccagacagacaggtcctgttcgacgatgtggggccttctctgatccgtctggtgcagcctgagctccgcgtccagctactccgctctttcctgcatttcctgggaatgccggctgatggctgcccccggggcccctcttggaacatcctgcttgacgacctctccctgctgcaggaggccccagacactgacagacccctgacctcggacctcttgcccactggggtcagccccttgggtcatacgaccatgctaggtgctgctcgcaggacagtgggcctgtgcaagcagggggaagagtttatacagctggccgtccaacagctgtggcccttgctctctggcccagagaagtcccagctgtcactgtgcttgctacagtatgagaagctcaaggtgctgcgctgcatccattccaagaccaaaaagcaggtgaggtcccagggtaagcggagtaagaggctagccaagcgcatcctgaaggaggagtgtaaccggagtgacctggcactgtggagggagtttggccatctcgagtggctgctgggcaacctggaggaggcccgcaaggttctggatatggcactggcactgggcctggtgcggggtctgcgggaccccgccctgtgtgacctgtgtctgctctacgcccagctggaggtggagcagggggcggggcctgcggccggaacggcgtcccccgctctgcatctgctctccagtctggccgagggtgggacctactcccacttcagcggccaggtgccatccgtatctgtcctgaaagcccggcggacctacgagcaggccctggcagctggggggggtgtggggctggtgtgttgcttcgccctgtttcagtatctgactgtgggggtggaggctgcggaccaggtgtaccgggaggccatagagcggctggaggctgcagaggacccccacccacaacaggacagcctatgccaggcgtcctcagagctggagaccctctccatgtcacgagcctccctgctgcgttacgccatgagctccagcatctgtccgatgggccgcctacgtgacgccctcacctcctccatctcccgtttccctggcaaccaatatctctggcagctgtacctgctggcagagagccggtaccacagcgctggccgctcccgccgcttcacccggagcatcacgcagcgctcgcccggcatcgtgccctggttgttcaccatccgtgctgagcagagcctgaagatgctagtggagagcgtgcagaagagcgatctctatggggacgtccaggccacacttccagaaagcggcctcaagcatcggatccgggcgctgttcgagagtgcggtgaccggcgaacatggggcacgctgccccctgctgtggaagatgtacctgcacttcctggtttccgagagggaggtggatcgaggcaggggcatcttctataaagcactgcagtacgtcccgtgggttaagagcctgtacatggatgccgtgttgctgtttccggacaacgtgcaggagttcctggacctgatgcaggagaaggagctacggctgcgggtgcccatggaggaagtggacatcttgctggaggactgaccctgacacacacacacacacacacacacaagcctccgagatacatggactaatggactagcagaaagcgtgtgtgtctttttttaaacagcacgtcgtgtttatgtatgtatatggaaatcaggcctctgttgggccctgtacaatttgtaccgactctgaattaataaagtcaaccccacccctac

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