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2025-07-10 04:18:50, GGRNA.v2 : RefSeq release 229 (Mar, 2025)

LOCUS       XM_045754773            1335 bp    mRNA    linear   INV 23-OCT-2024
DEFINITION  PREDICTED: Procambarus clarkii fibrous sheath CABYR-binding
            protein-like (LOC123765905), mRNA.
ACCESSION   XM_045754773
VERSION     XM_045754773.1
DBLINK      BioProject: PRJNA1171844
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Procambarus clarkii (red swamp crayfish)
  ORGANISM  Procambarus clarkii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea;
            Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda;
            Pleocyemata; Astacidea; Astacoidea; Cambaridae; Procambarus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091154) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_040958095.1-RS_2024_10
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 10/17/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1335
                     /organism="Procambarus clarkii"
                     /mol_type="mRNA"
                     /isolate="CNS0578487"
                     /db_xref="taxon:6728"
                     /chromosome="5"
                     /sex="female"
                     /tissue_type="muscle"
                     /geo_loc_name="China: Hubei,Wuhan,Caidian"
                     /lat_lon="30.41 N 113.78 E"
                     /collection_date="2018-07"
     gene            1..1335
                     /gene="LOC123765905"
                     /note="fibrous sheath CABYR-binding protein-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:123765905"
     CDS             1..1335
                     /gene="LOC123765905"
                     /codon_start=1
                     /product="fibrous sheath CABYR-binding protein-like"
                     /protein_id="XP_045610729.1"
                     /db_xref="GeneID:123765905"
                     /translation="
MPGAAEDEVDDTMPGATEDEVDDAMPGAAEDEVDVAMPGAAEDEVDDTMPGATEDEVDDAMPGAAEDEVDVAMPGAAEDEVDVAMPGAAEDEVDVAMPGAAEDEVDVAMPGAAEDEVDVAMPGAAEDEVDDTMPGAAEDEVDVAMPGAAEDEVDVAMPDAAEDEVDVAMPGAAEDEVDVAMPDAAEDEVDVAIPGAAEDEVDVAMPGAAEDEVDVAIPGAAEDEVDVAIPGAAEDEVDVAMPGAAEDEVDVAMPGAAEDEVDVAIPGAAEDEVDVPIPGAAEDEVDVAIPGAAEDEVDVAMPGAAEDEVDDAMPGAAEDEVDVAIPGATEDEVDVAMPDAAEDEVDDAMPGAAEDEVDDAMPGAAEDEVDDAMPGAAEDEVDVAMPGATEDEVDIALPGAAEDEVDDTMPGATEDEVDDAMPGAMQRHATKWLSELKKRVTRRD"
     misc_feature    40..>1260
                     /gene="LOC123765905"
                     /note="Midasin, AAA ATPase with vWA domain, involved in
                     ribosome maturation [Translation, ribosomal structure and
                     biogenesis]; Region: MDN1; COG5271"
                     /db_xref="CDD:444083"
     misc_feature    <715..1203
                     /gene="LOC123765905"
                     /note="ribonuclease E; Reviewed; Region: rne; PRK10811"
                     /db_xref="CDD:236766"
ORIGIN      
atgcctggtgctgcagaagatgaggtagatgatactatgcctggtgctacagaagatgaggtagatgatgctatgcctggtgctgcagaagatgaggtagatgttgctatgcctggtgctgcagaagatgaggtagatgatactatgcctggtgctacagaagatgaggtagatgatgctatgcctggtgctgcagaagatgaggtagatgttgctatgcctggtgctgcagaagatgaggtagatgttgccatgcctggtgctgcagaagatgaggtagatgttgccatgcctggtgctgcagaagatgaggtagatgttgccatgcctggtgctgcagaagatgaggtagatgttgccatgcctggtgctgcagaagatgaggtagatgatactatgcctggtgctgcagaagatgaggtagatgttgctatgcctggtgctgcagaagatgaggtagatgttgctatgcctgatgctgcagaagatgaggtagatgttgctatgcctggtgctgcagaagatgaggtagatgttgctatgcctgatgctgcagaagatgaggtagatgttgctatacctggtgctgcagaagatgaggtagatgttgctatgcctggtgctgcagaagatgaggtagatgttgctatacctggtgctgcagaagatgaggtagatgttgctatacctggtgctgcagaagatgaggtagatgttgctatgcctggtgctgcagaagatgaggtagatgttgctatgcctggtgctgcagaagatgaggtagatgttgctatacctggtgctgcagaagatgaggtagatgtacctatacctggtgctgcagaagatgaggtagatgttgctatacctggtgctgcagaagatgaggtagatgttgctatgcctggtgctgcagaagatgaggtagatgatgccatgcctggtgctgcagaagatgaggtagatgttgctatacctggtgctacagaagatgaggtagatgttgctatgcctgatgctgcagaagatgaggtagatgatgccatgcctggtgctgcagaagatgaggtagatgatgctatgcctggtgctgcagaagatgaggtagatgatgctatgcctggtgctgcagaagatgaggtagatgttgctatgcctggtgctacagaagatgaggtagatattgctttgcctggtgctgcagaagatgaggtagatgatactatgcctggtgctacagaagatgaggtagatgatgctatgcctggtgctatgcaacggcatgctacgaaatggctttcggaactgaaaaagagagttacgaggagagactaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]