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2024-03-29 00:02:17, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_039046945             654 bp    mRNA    linear   PLN 13-JAN-2021
DEFINITION  PREDICTED: Benincasa hispida kiwellin-like (LOC120089464), mRNA.
ACCESSION   XM_039046945
VERSION     XM_039046945.1
DBLINK      BioProject: PRJNA691418
KEYWORDS    RefSeq.
SOURCE      Benincasa hispida (wax gourd)
  ORGANISM  Benincasa hispida
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae;
            Benincaseae; Benincasa.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_052358.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Benincasa hispida Annotation Release
                                           100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.5
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Benincasa hispida"
                     /mol_type="mRNA"
                     /cultivar="B227"
                     /db_xref="taxon:102211"
                     /chromosome="10"
                     /tissue_type="young leaf"
                     /dev_stage="seedlings with two fully expanded leaves"
                     /country="China: Guangdong"
     gene            1..654
                     /gene="LOC120089464"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 9 Proteins, and 86% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:120089464"
     CDS             1..654
                     /gene="LOC120089464"
                     /codon_start=1
                     /product="kiwellin-like"
                     /protein_id="XP_038902873.1"
                     /db_xref="GeneID:120089464"
                     /translation="
MTNLRSQLFFVILSVISIFHLCGAISSCNGPCHTLNDCQGKLICINGICQDDPNLGTHICSGGGGGSGPPSSGNGCHSIGNLNCKGKSFPQFKCSPPVTSSTRAVLTNNDFTKGGSGGDPSECDGKFHDNSDPIVALSTGWYNGGSRCGKMIQITAQNGRSVLAKVVDECDSVNGCDKAHAHLPPCHNNIVDGSDAVWHALELDIDVGEIPVTWSDA"
     misc_feature    265..648
                     /gene="LOC120089464"
                     /note="double-psi beta-barrel fold of the kiwellin family;
                     Region: DPBB_kiwellin-like; cd22270"
                     /db_xref="CDD:439250"
     misc_feature    order(271..273,277..279,358..375,433..438,442..444,
                     502..507,511..513)
                     /gene="LOC120089464"
                     /note="putative effector binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:439250"
ORIGIN      
atgacaaatttaagatcgcaactattttttgttattctatctgtcatttctatttttcatctttgtggcgcaatctcttcttgcaatgggccatgtcacactctaaacgattgtcaaggaaaattgatttgcataaatggaatatgccaggatgatcctaaccttggcacacacatttgttccggcggtggaggaggatcaggtccaccatcttccggcaacggttgtcattcaattggaaacttgaactgcaagggaaaatcctttccccaattcaaatgctcgcctccagtgacatcttctactcgagccgtgctgacaaataacgactttaccaaaggtgggagtggaggggacccgtcagagtgcgatgggaagttccatgataactctgacccaatagtggcgttgtccacaggttggtacaatgggggttcgagatgtgggaaaatgatccagattacggctcaaaatggaaggtcggtgttggctaaggtggtggatgagtgtgattccgtgaatggatgcgacaaagcgcatgctcatttgccaccgtgtcacaataatattgtggatggctcagatgctgtatggcatgctttggaacttgatatagatgtgggcgaaatacctgttacctggtctgatgcttag
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]