LOCUS       XM_030832387            1857 bp    mRNA    linear   MAM 26-NOV-2024
DEFINITION  PREDICTED: Globicephala melas vimentin (VIM), mRNA.
ACCESSION   XM_030832387
VERSION     XM_030832387.3
DBLINK      BioProject: PRJNA1026603
KEYWORDS    RefSeq.
SOURCE      Globicephala melas (long-finned pilot whale)
  ORGANISM  Globicephala melas
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha;
            Cetacea; Odontoceti; Delphinidae; Globicephala.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083315) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Nov 26, 2024 this sequence version replaced XM_030832387.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963455315.2-RS_2024_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/21/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1857
                     /organism="Globicephala melas"
                     /mol_type="mRNA"
                     /db_xref="taxon:9731"
                     /chromosome="2"
     gene            1..1857
                     /gene="VIM"
                     /note="vimentin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 34 Proteins"
                     /db_xref="GeneID:115840005"
     CDS             137..1537
                     /gene="VIM"
                     /codon_start=1
                     /product="vimentin"
                     /protein_id="XP_030688247.1"
                     /db_xref="GeneID:115840005"
                     /translation="

MSSRSVSSSSYRRMFGSSGTASRPSSSRSYVTTATRTYSLGSALRPSTSRSLYASSPGGVYATRSAAMRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDKVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLSEDIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDEEIQELQAQIQEQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFSVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIALPLPNFSSLNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE"

     misc_feature    176..439
                     /gene="VIM"
                     /note="Intermediate filament head (DNA binding) region;
                     Region: Filament_head; pfam04732"
                     /db_xref="CDD:461414"
     misc_feature    440..1366
                     /gene="VIM"
                     /note="Intermediate filament protein; Region: Filament;
                     pfam00038"
                     /db_xref="CDD:459643"
     polyA_site      1857
                     /gene="VIM"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

tctcgctccgggctctccgctccagagactcagcagcgctccctttgcccacacccaccgcgccctcgcgcgcctctcctcccggagctagcccgcgccaccgcagccgcccagcccaccgccgccctctgcagtcatgtccagcaggtccgtgtcctcgtcctcctaccgcaggatgttcggcagctctggcaccgcgagccggccgagctccagccggagctacgtgaccacggccacccgcacctacagcctgggcagcgcgctgcgccccagcaccagccgcagcctctacgcctcgtccccgggcggcgtgtacgccacgcgctccgcggccatgcgcctgcggagcagcgtgcccggcgtgcgcctgctgcaggactcggtggacttctcgctggccgacgccatcaacaccgagttcaagaacacccgcaccaacgagaaggtggagctgcaggagctgaacgaccgcttcgccaactacatcgacaaggtgcgcttcctggagcagcagaacaagatcctgctggccgagctcgagcagctcaagggccagggcaagtcgcgcctgggggacctctacgaggaggagatgcgagagctgcgccggcaggtggaccaactcaccaacgacaaagcccgcgtcgaggtggagcgcgacaacctgtccgaggacatcatgcgtctccgggagaagttgcaggaggagatgcttcagagggaggaagccgagagcaccctgcagtctttcagacaggatgttgacaatgcttcgctggcacgtctggacctggagcgtaaagtggaatccttgcaagaagagattgcctttttgaagaaactacatgatgaggaaatccaggagctgcaggcccagattcaagaacagcacgtccagatcgatatggatgtttccaagcccgacctcacggctgccctgcgtgacgtccgccagcagtacgagagcgtggccgccaagaacctccaggaggctgaggaatggtacaagtccaagtttgctgacctctccgaggctgctaaccgcaacaacgatgccctgcgccaggccaagcaggagtcgaacgagtaccgtcggcaggtgcagtccctcacctgcgaggtggatgccctcaaaggcaccaacgagtctctggaacgccagatgcgtgaaatggaagagaacttttccgtggaagctgctaactaccaagacactattggccgcctgcaggacgagattcagaacatgaaggaagagatggctcgtcacctgcgtgaataccaagatctgctgaatgttaagatggctctcgacatcgagattgccacctacaggaagctgctggaaggagaggagagcaggattgctctgcctcttccaaacttttcttccctgaacctgagggaaaccaatctggattcactccctctggttgacacccattcaaaaaggacacttctgattaagacggttgaaaccagagatggacaggtcatcaacgaaacttcccagcatcacgatgacctggaataaaaactgcacgtactccatgcggcaaaatactaccagtgagaataaaaaagaaatctgtatcttaaagaaacagctttcaagtgcctttctgcagttttttcaggagtgcaagatagatttgaaataggaataagctctagttcttgagaaccaacactcgtaaaagatttagaaaaaagtttacaacataatctagtttaccgaagacgccttgtgctagaatactttttaagaagtatttttgaataccattaaaactgcttttttccatcacgtatctgaccaacttgtttctgcttcaataaatctttggaaaactc

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