LOCUS       XM_022684305            2561 bp    mRNA    linear   VRT 21-JUL-2022
DEFINITION  PREDICTED: Astyanax mexicanus vimentin-related 2 (vimr2), mRNA.
ACCESSION   XM_022684305
VERSION     XM_022684305.2
DBLINK      BioProject: PRJNA853366
KEYWORDS    RefSeq.
SOURCE      Astyanax mexicanus (Mexican tetra)
  ORGANISM  Astyanax mexicanus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Characiformes; Characoidei; Characidae; Astyanax.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_064417) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jul 21, 2022 this sequence version replaced XM_022684305.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: Astyanax mexicanus Annotation
                                           Release 103
            Annotation Version          :: 103
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2561
                     /organism="Astyanax mexicanus"
                     /mol_type="mRNA"
                     /isolate="ESR-SI-001"
                     /db_xref="taxon:7994"
                     /chromosome="10"
                     /sex="female"
                     /tissue_type="muscle"
                     /dev_stage="adult"
     gene            1..2561
                     /gene="vimr2"
                     /note="vimentin-related 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     1 Protein"
                     /db_xref="GeneID:103027633"
     CDS             39..1223
                     /gene="vimr2"
                     /codon_start=1
                     /product="type III intermediate filament"
                     /protein_id="XP_022540026.2"
                     /db_xref="GeneID:103027633"
                     /translation="

MAMLRVSSYRRLFEEQQWGQAAGGSQRCGAHLLKSSARGGVSMADCPDPDFPAAHALNRAGVVRFTQERSIMAALNDRLAVLIDVARCLEEENESLELQIIELEERLGVKPSSSTSLSIASPSDYSLEAVIERLRREKEDILCETEALKTELQSLQMKYDEVVEQRTLVQLEREDVAVEVDADTADCLALRDQVGIYEEQLAEMERQHELRVESLTEPETGDEGAAPPVALQFPQIDITPAIMDIKEYYCQLAESLQFESRARAVGAITAGGDEQQNRLEKLTGGKVKDPSEVTDVNVLKDLVAELQKEVAELEKYGEDLEAEIEAKREAHLLKIEELETHISQLEEDEADLQEQIKEQTGDYEELLSQKMTLDIEIAAYRGLVEEEEERLCYL"

     misc_feature    237..1208
                     /gene="vimr2"
                     /note="Intermediate filament protein; Region: Filament;
                     pfam00038"
                     /db_xref="CDD:425436"
ORIGIN      

cactcttttggctgctgtgtgagggttctggagcagacatggcgatgctgagggtatcatcgtaccgcaggctgtttgaggagcagcagtggggccaggctgcaggaggcagtcagcgctgtggtgctcatcttctaaaatcttctgccaggggtggggtgtcgatggcggactgtcctgacccggacttccctgcagctcatgccctgaaccgggcgggcgtggtgagattcacccaggaacgctccataatggccgccctcaacgaccgcctggccgtccttatcgatgtggctcgctgtctggaggaagagaacgagtctctggagcttcagattattgaactggaggagaggctgggagtgaagccgagctcctccacctccctcagcatcgcgagtccctcagactacagtttggaggccgtcatagagagactgcgcagagagaaggaggatattttatgtgagacagaagcgctgaagacggagctgcagtctctgcagatgaagtatgatgaggtggtggagcagcggaccctggttcagctggagcgtgaggacgttgctgtggaggtggatgccgacactgccgactgcctggcactcagagatcaagtgggcatctatgaagagcagctggctgaaatggagcggcagcatgagctgagggttgagtctctaactgaacctgagactggagatgaaggagcagctcctcctgtggctttgcagttcccgcaaatcgacatcactccagccatcatggatattaaggagtattactgccagctggctgagagccttcagttcgagtccagagcccgggctgtcggcgccatcactgccggaggagatgagcagcagaatcgcctggaaaagctgaccggagggaaagtgaaggatccctctgaagtcacagacgtgaacgtgctgaaggacttggttgcagagctgcagaaggaagtagctgagctggagaagtacggcgaggatctggaggctgagattgaagctaaaagagaggctcatctgctaaagatagaggagctggaaacccacatcagccagctggaggaagacgaggctgacctgcaggagcagataaaggagcagacaggcgactacgaggagctgctcagccagaagatgactctggatatagaaatcgctgcttacaggggcttggtggaggaggaagaggagagactctgctacctgtgagtggaggagagagaagagagagagcaaaagagagagagagagaggccaggcccagacccagacgctctcttgtggattggtgcagaaaaagtgaaaagctaatatagacttacttcagctgtaaaagtgagtcagacaagctaaaaaaagcttcacacgcagccgtctgagcaaacgcagacctccagccgcagataaatggcatctgggctgtctttccagaccattgataatgcttgctgcagtcggtggcgtgtaatctcgggtcctgaaagacagtgctggctgtgatgtgtgtgtcggaggggggtggagatgggaggttttgtgtctgatgctgcgtttcatttaaactcagatttttccagaatttaacagaattatttaaaaaaaaaaagagcagaatttaattatacagtactgtgtaaatgttttaggcacctgtgggaatttcagtaaagaaaagcttcttatctgtgaagtaaatgtttattagcaccagcattacaggaaaaaataaaaacagcaattttacaaaaatcagagcttttacagcccggttttccttaaaacaacatctcctaatctctcctcctcatctgagtttaatggagtttaatttctagttctcatcatatcaagtttggacacttaaattatttttttttttcctcattattttaaaatgttctacattgcaggctaacattaaagtcatccaaaccatgaaaaaaaacatatgaatgaacatattatttgcaaaacagaatatgttcaaagtagcacatcttgcttatatagagacaggtttgcacgtttctgctggattttctcagtcagttttatgatgtagagtcacctggaattcaggctttcagttaacagctgtgctgaactcatcaagagttaattacttgcctcttaattaagctcaatcaatctgaaacatttcaagaactttgaaagtgcagttggaaagccaatcaaaaacgttggtgatgatggaatgatggaactggcactcatcaggaccactacaggaaaggaagaccaagagttacttctgttgtttctagttctcatcatattaatcaacagctggtttggtaaataattggtaaatgtggtaaatcaggtgagctgctgacggaactgaacatcatatatatatatatatatatatacacacatgctgactgaggagcatccaggagaaatctggaactattacactttgttcttcagcttcaggctcacaggatataaaaaacatacttatagataaaaattaatcagaatggtcccactttataataagtgtccctaaatactatgtag

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