LOCUS       XM_020306990            2555 bp    mRNA    linear   PLN 28-APR-2025
DEFINITION  PREDICTED: Aegilops tauschii subsp. strangulata uncharacterized
            protein (LOC109747855), transcript variant X2, mRNA.
ACCESSION   XM_020306990
VERSION     XM_020306990.4
DBLINK      BioProject: PRJNA702515
KEYWORDS    RefSeq.
SOURCE      Aegilops tauschii subsp. strangulata
  ORGANISM  Aegilops tauschii subsp. strangulata
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053041) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 28, 2025 this sequence version replaced XM_020306990.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_002575655.3-RS_2025_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/18/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2555
                     /organism="Aegilops tauschii subsp. strangulata"
                     /mol_type="mRNA"
                     /cultivar="AL8/78"
                     /sub_species="strangulata"
                     /db_xref="taxon:200361"
                     /chromosome="7"
                     /tissue_type="seedling"
                     /geo_loc_name="USA: California"
     gene            1..2555
                     /gene="LOC109747855"
                     /note="uncharacterized LOC109747855; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 95
                     long SRA reads, 1 Protein"
                     /db_xref="GeneID:109747855"
     CDS             27..2261
                     /gene="LOC109747855"
                     /codon_start=1
                     /product="uncharacterized protein isoform X2"
                     /protein_id="XP_020162579.1"
                     /db_xref="GeneID:109747855"
                     /translation="

MPEAPAVSIVDFSSAASSFSSPTPTSPRPRPLGEPRRAAVNAMATASSEPLPSGEEGDEDAGARIDDDLRGMSDQALKERFKRLQDGLNKFPGVLPDGGKKYRRSLRAVRGELDRRTRLASDSASLRPRPRPPRPQGRLGEPDGNRGERMIQSSCAEPSGIDVEITSICPGKTKTPVENKGKSYEVSESCKTNAQPTPPKVLCIDNSIDVENMSSDDDFKDNGDIRTRENASTPSRKRKGDDSVNFSMRLRPRKAQEVVLLDADAHHSESAEKPTTKRDAMKIYYPSSEHSNSIELSHDDIKCLEPESLLSSTIMNFYIMYLQGPMSSISTQRGKYHIFNTYFFKKLEALKSKVDKPSYFLNLRRWWKGIDIFQKPYILFPVHADTHWSLVIICMPAKEDQSGPIILHLDSLKFHNSRLIFSVVERFLKQEWNYLKENGSLAECPIRETVWKKLPHKIEKKPIAVPQQENEFDCGLFVLYYMQRFIEEAPERLHKKDLSMFGKTWFQPEEASALRKKMKTLLHQLFEEADPSNDSTSEQTACQLLLEAKPANNVMELATSEHPLEVSSAEVIPTSEHLLEVGSVEMTPMSEHPLEVGSAEMSPTQEHPLVGSSGEMAPAQEHPLVGSSAEMEPTQEHPLVGNSAEMEPKQEYPLVGSSAEMAPTQEHTLVGSSAEMAPTQEHPLVGSSAEMEPTQEHPTVGSSAEMEQTQGHPMVGSSAEITSQKPLEGTSTRPTSFEHPLECS"

     misc_feature    954..1544
                     /gene="LOC109747855"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     Region: Peptidase_C48; pfam02902"
                     /db_xref="CDD:397169"
     misc_feature    <1605..2165
                     /gene="LOC109747855"
                     /note="EBNA-3B; Provisional; Region: PHA03378"
                     /db_xref="CDD:223065"
     polyA_site      2555
                     /gene="LOC109747855"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

tttttgcgagaaggccctcctccaatatgccagaggccccggctgtcagcatcgtcgacttctcctccgccgcctcctctttctcttccccaaccccaacttcccctcgaccccgccccctcggcgagccgcgccgcgccgcggtgaatgcgatggccacggcttcgtcggagccgctccccagcggcgaggagggggacgaggatgcgggggcgaggatcgatgacgaccttcgcggcatgtcggaccaggcgctgaaggagaggttcaaacgcctacaggacgggctcaacaaattccccggcgtcctcccggacggtgggaagaagtaccgccgctcgctccgggccgtccgcggcgagctcgaccgccgcactcgcttggcctcggactcggcctctctccggccacggccgcggccgccgcgtccgcaaggccgcctaggcgagccggatggcaatagaggtgaacggatgatccagtcaagttgtgcagaaccgtctggcatcgatgtggagataacaagtatatgccctggcaagactaaaacgccagtagaaaataaagggaagtcgtatgaagtaagtgaatcttgcaaaaccaatgcacaaccaacgcctcccaaagtattatgtatcgacaactcaatcgacgtggaaaatatgtcttctgacgatgacttcaaggataacggcgatattaggacacgtgaaaatgcttccacaccttctcggaaaaggaaaggagatgactcagtaaacttctcaatgcgattgagaccaagaaaggctcaagaggtggttctactcgatgcagatgcacaccattcagaatctgcagagaagccaaccactaaacgggatgcaatgaagatatattatccctcaagcgaacactcaaattctattgagctttctcatgatgacataaaatgccttgagcctgaatcgttactttcctcaactataatgaacttctacattatgtacctgcaagggccaatgtcatcgattagtacacaaagaggcaagtatcacattttcaatacatacttcttcaagaaacttgaagccctaaaatcaaaggtagacaagccttcttatttcttaaacctgagaagatggtggaaaggcatagatatatttcaaaagccatatatattatttcctgtgcatgcagatactcattggagcctggtgattatatgcatgccagcaaaggaagatcaatcaggccccattatacttcatttggattcactgaagttccataacagcagattgattttcagtgttgttgagagattcttaaaacaagaatggaattacctgaaggaaaatgggtctttagcagaatgtcctatacgagaaacggtgtggaagaaacttcctcataaaattgagaagaaaccaattgcggttccgcagcaggaaaatgaatttgactgtggcctctttgttctgtactatatgcagcggttcatcgaggaggcacctgaaaggcttcacaagaaagacctttctatgtttggcaaaacatggtttcaacctgaagaggcttctgcattgcgaaagaaaatgaagaccctgcttcatcagttgtttgaggaagcggatcccagtaacgatagtacatcggagcagacagcgtgtcagttgcttttggaagctaagcctgcaaacaacgtgatggagctggcaacgtcagaacaccctttggaagtcagttcagctgaggtgataccaacgtcggaacacctgctggaagtcggttctgttgagatgacaccaatgtctgaacaccctttggaggtcggttctgctgagatgtcaccaacgcaagaacatcctttggtgggcagttctggtgagatggcaccagcgcaagaacatcctttggtgggcagttcggctgagatggaaccaacacaagaacatcctttggtgggcaattcggctgagatggaaccaaagcaagaatatcctttggttggcagttcggctgagatggcaccaacgcaagaacataccttggtgggcagttcggctgagatggcaccaacgcaagaacatcccttggtgggcagttcggccgagatggaaccaacgcaagaacatcctacggtgggcagttccgccgagatggaacaaacgcaaggacatcctatggtgggcagttccgccgagattacatcgcagaaacctttggaaggcacttcgacccgaccaactagttttgagcaccctttggaatgcagctgattgatgttaccacctttggagcgacctacgttacccgtagaaaccgaaaccggctcggaattgtattatagatgggaaggtgttgtagcctgcatctgtgggcaactttgagggaggggtggtgttgcatgactgaacgttgcagttaatgtatccgcgggaactaccgtgtatatataatatcagtaggagaaatggtgggtgtacgagtcgctcaggatggacttcatctgtttagttatttataggctaggctggaagaggtcaataaaatctcaggctctgattagacga

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