2025-07-15 21:01:48, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS XM_020265616 3075 bp mRNA linear PLN 28-AUG-2017 DEFINITION Talaromyces atroroseus Pro-apoptotic serine protease nma111 (UA08_03328), partial mRNA. ACCESSION XM_020265616 VERSION XM_020265616.1 DBLINK BioProject: PRJNA374571 BioSample: SAMN03339010 KEYWORDS RefSeq. SOURCE Talaromyces atroroseus ORGANISM Talaromyces atroroseus Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Talaromyces; Talaromyces sect. Trachyspermi. REFERENCE 1 (bases 1 to 3075) AUTHORS Rasmussen,K.B., Rasmussen,S., Petersen,B., Sicheritz-Ponten,T., Mortensen,U.H. and Thrane,U. TITLE Talaromyces atroroseus IBT 11181 draft genome JOURNAL Unpublished REFERENCE 2 (bases 1 to 3075) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (28-AUG-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3075) AUTHORS Rasmussen,K.B., Rasmussen,S., Petersen,B., Sicheritz-Ponten,T., Mortensen,U.H. and Thrane,U. TITLE Direct Submission JOURNAL Submitted (24-JUN-2015) DTU Systems Biology, Technical University of Denmark, Soeltofts Plads 223, Kgs. Lyngby 2800, Denmark COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_017971435). COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..3075 /organism="Talaromyces atroroseus" /mol_type="mRNA" /strain="IBT 11181" /isolation_source="plant fruit food product" /host="Capsicum annuum" /db_xref="taxon:1441469" /chromosome="Unknown" /geo_loc_name="Denmark" /lat_lon="55.77198 N 12.50519 E" /collection_date="17-Dec-1990" gene <1..>3075 /locus_tag="UA08_03328" /db_xref="GeneID:31003083" CDS 1..3075 /locus_tag="UA08_03328" /note="GO_component: GO:0005634 - nucleus; GO_function: GO:0004252 - serine-type endopeptidase activity; GO_function: GO:0005515 - protein binding; GO_process: GO:0006508 - proteolysis; GO_process: GO:0006915 - apoptotic process" /codon_start=1 /product="Pro-apoptotic serine protease nma111" /protein_id="XP_020121228.1" /db_xref="GeneID:31003083" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR001940" /db_xref="InterPro:IPR009003" /db_xref="InterPro:IPR025926" /translation="
MTGEARPKRKHSPVPASDRPAKHLKPESTVLTPGDETPANGTVYDVENDEDITPIVALGATQADSPEWQATIESVVKSVVSIHFCQTCSFDTDLSMCSQATGFVVDAKRGYILTNRHVVCAGPFWGYCIFDNHEECDVRPVYRDPVHDFGILKFDPKAIKYMDMTELKLNPEGAQVGVEIRVVGNDAGEKLSILSGVISRLDRNAPEYGEGYSDFNTNYIQAAAAASGGSSGSPVVNIAGHVVALQAGGRADGAATDYFLPLGRPLRALQCIQEEKPVTRGTIQTQWMIKPFDECRRLGLTPEWEASVRKTAPKETGMLVAEIVLPEGPADGKLQEGDVLLKVNGELLTQFVRLDDILDSNVGKSIHLLIQRGGEDLELECSVGDLHAITPDRFVSVAGGTFHDLSYQQARLYAIATRGVYVCEAAGSFKIENTLSGWIIDSVDKRPTRNLQEFIEVMKTIPDRSKIVISYRHIRDLHTRGTSIIYLDRHWHPKMSLAVRNDKTGLWDFSDIAEPLPAEPPVPRKADFIQLDGVSQTAAADIVRSFVRVSCTMPLKLDGFPQGKKTGYGLVIDAEKGLVVVSRAIVPYDLCDINITVADSIIVTGKVIFMHPLQNYTIVQYDPSLVQAPVKSARLSTENIKQGQDTIFVGFNQNLRIVVAKTTVTDITTVAIPANASAPRYRAINLDAITVDTGLSSQCTNGVLLRDDGVVQALWLNYLGERTPSSHKDVEYHLGLATPSLLPIISKIQGGEIPKLRILDMESYVIQMSQARIMGVSEKWIEQVAAANPSRHQLFMVRKLDSPPPSFTHHETDSLKEGDIILTLNGKLITRVSEFDVMYDNEVLDALIVRNGQEMHVKLRTVPTEDLETDRAVMFCGAVLQKPHHAVRQQISKLHSEIYISARSRGSPAYQYGLSPTNFITAVNGVQTRDLDSFVREVKKIPDNTYFRLRAVTFDNVPWVVTMKKNDHYFSMSEYVKDPSVPAGWKVVSYPKKDEASADTSNLTADAMDEGTEGGGSDAEPDQD"
misc_feature 292..1158 /locus_tag="UA08_03328" /note="Periplasmic serine protease, S1-C subfamily, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones]; Region: DegQ; COG0265" /db_xref="CDD:440035" misc_feature 883..1149 /locus_tag="UA08_03328" /note="circularly permuted first PDZ domain (PDZ1) of Saccharomyces cerevisiae pro-apoptotic serine protease Nma111p and related domains; Region: cpPDZ1_ScNma111-like; cd06786" /db_xref="CDD:467625" misc_feature order(889..912,961..963,970..972,1060..1065,1072..1074) /locus_tag="UA08_03328" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467625" misc_feature 1162..1392 /locus_tag="UA08_03328" /note="PDZ-like domain; Region: PDZ_1; pfam12812" /db_xref="CDD:372324" misc_feature 2311..2577 /locus_tag="UA08_03328" /note="permuted PDZ domain of Deg/high-temperature requirement factor A (HtrA) family of housekeeping serine proteases and related domains; Region: cpPDZ_Deg_HtrA-like; cl49614" /db_xref="CDD:483954" misc_feature order(2317..2340,2383..2385,2392..2394,2503..2508, 2515..2517) /locus_tag="UA08_03328" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467627" misc_feature 2611..2850 /locus_tag="UA08_03328" /note="second and fourth PDZ domains (PDZ2 and 4) of Saccharomyces cerevisiae pro-apoptotic serine protease Nma111p and related domains; Region: PDZ2-4_Nma111p-like; cd06719" /db_xref="CDD:467617" ORIGIN
atgaccggcgaagctcgccccaagcgcaaacatagcccggtgcctgcgtccgacaggcctgcgaaacacctgaagcctgaatccactgttcttacgcccggggatgaaacacctgcgaatggcaccgtatatgacgtggagaatgatgaagacatcacaccgatcgttgcgttgggggcaactcaggcggactcgccggagtggcaagcgactattgagtcagtggtgaagagtgtcgtctcgatccatttctgtcagacatgctcattcgacaccgacctgtccatgtgtagccaggcaacagggttcgttgtggacgccaagagaggctacattctcacaaacagacatgttgtctgtgccggcccgttctggggttattgcattttcgacaatcatgaggagtgcgatgttcgtcccgtttatcgggatcctgtccacgactttggcattctgaaattcgaccccaaggcaatcaaatacatggatatgacagagctaaagttgaatccggagggggcacaagtgggggttgagatcagggtggtcggtaacgatgccggagagaagctaagtattctctctggtgtcatcagtcgccttgaccgtaacgctcctgagtacggcgaaggctacagcgacttcaacacaaattacatacaagcggctgctgccgccagcggcggaagctctggtagtcctgtcgtcaatatcgccgggcatgtcgtcgctctacaggccggtggtcgtgcggatggtgctgctacagattactttctcccactgggccgtccactacgcgcactccagtgcatacaggaagagaaacctgtcacgcgaggcaccattcaaacacaatggatgattaaaccttttgatgaatgtcgacgtcttggactgaccccggagtgggaggcctctgtccgcaaaaccgcgcctaaggagacaggaatgttggtggcggaaattgttcttcccgagggcccggctgatgggaagcttcaagagggagatgtacttctcaaggtgaatggagagctgctcactcagtttgtgcgacttgatgatatactggattccaatgtcggcaaatctatccaccttcttatacagcgcggcggcgaggacctcgaattggaatgcagcgttggagacctacacgctatcacaccagatcgcttcgtcagcgtcgctggtggtacattccatgatctttcttaccagcaagcgcggctttatgctatcgccactcgtggcgtctacgtttgtgaggcagcaggatccttcaagattgaaaacactctgtcggggtggatcattgattcggtagacaagcggcctactcgaaacttgcaagagtttattgaggttatgaagacaataccagatcgctcgaaaattgttatttcttatagacatattcgagatctccatacacgaggcacaagcattatctacctcgatcgtcactggcatccaaagatgtcccttgcagtccgtaacgacaagaccggcttgtgggacttttcagatatcgccgaacctctacccgctgagccaccagttcctcgaaaagcggattttattcagttggacggggtcagtcagaccgctgccgctgatatcgttcgcagtttcgtccgggtgtcatgcaccatgccgctgaagctggatggattccctcagggcaaaaaaaccggatacggtttagtcattgatgcggagaagggccttgtcgttgtttctcgggctattgttccgtacgatctgtgtgatatcaatatcacagttgcagattcgattatcgtcactggcaaagtgattttcatgcatcctctgcaaaactataccattgtgcaatacgatccaagtctcgtccaggctccagtaaaaagtgcgcggctaagcacggaaaacatcaaacaaggtcaagacacaatatttgtcggattcaatcaaaatctgcgcattgttgtcgctaaaacaacagtcactgacatcaccaccgttgctatccccgccaacgcctctgctccacgttaccgggctatcaatcttgacgctatcacagtggacacggggctcagcagccagtgcactaacggtgtcttgctgagggatgacggcgttgtccaggctctttggctaaactatctaggagaacgaacgccaagctcgcataaagacgtcgagtatcatcttgggctcgcaacgccttctcttctacccataattagcaagatccaaggaggcgaaatcccaaagttgcgtatcttggatatggaaagctatgtcattcaaatgagtcaagctcgaataatgggcgtatcggagaagtggatcgagcaagtagcagcagccaacccttcccgacatcaattgttcatggtcagaaaactggacagccctcctccatctttcacgcatcatgagacagattccttgaaggagggagacatcattctcacactaaatggaaagcttattacgcgagtctccgagttcgacgttatgtacgacaacgaagttctcgacgcgttgatcgtccgaaacggacaggaaatgcacgtcaagttgcgtacggtgccaacggaagatttggagaccgatcgagcagtcatgttttgcggagctgtgttgcagaagccacatcacgctgtgcggcaacagatttcgaagcttcacagtgagatttacatcagtgctaggagtcgtggctcacctgcctaccagtatggattgtctccgacaaatttcatcacagcagtgaacggagtgcaaacccgcgatctcgacagctttgtccgcgaggtgaaaaagatcccggataacacatacttccgtcttcgggcggtcacattcgacaatgtaccgtgggttgtcacgatgaaaaagaatgatcactacttctccatgtcggaatatgtcaaagacccctcagtcccggctgggtggaaggtggtctcttatccgaaaaaagacgaagcttcggcggatacatccaacctgacagcagatgcgatggacgaaggaacagaaggtggcggaagtgatgcagagcctgatcaggattag
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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