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2024-03-29 07:47:07, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_011658707             648 bp    mRNA    linear   PLN 17-DEC-2019
DEFINITION  PREDICTED: Cucumis sativus ripening-related protein grip22
            (LOC101211270), mRNA.
ACCESSION   XM_011658707
VERSION     XM_011658707.1
DBLINK      BioProject: PRJNA182750
KEYWORDS    RefSeq.
SOURCE      Cucumis sativus (cucumber)
  ORGANISM  Cucumis sativus
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae;
            Benincaseae; Cucumis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_026660.2) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Cucumis sativus Annotation Release
                                           102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.3
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Cucumis sativus"
                     /mol_type="mRNA"
                     /cultivar="9930"
                     /db_xref="taxon:3659"
                     /chromosome="6"
                     /tissue_type="leaf"
     gene            1..648
                     /gene="LOC101211270"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 Proteins, and 53% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:101211270"
     CDS             1..648
                     /gene="LOC101211270"
                     /codon_start=1
                     /product="ripening-related protein grip22"
                     /protein_id="XP_011657009.1"
                     /db_xref="GeneID:101211270"
                     /translation="
MAKLACLVSFFFLVLSLLGLSQAISSCREPCQTLKNCKGQLICINGQCNDDPDVGTRICSTDSDNGADGEKFRCEAFGRLHCKGKSFPQFKCSPRVTSSTRAILTNNDFSKGGDGGDPSECDGKFHHNSQPIVALSTGWYNGGSRCGKKIRITARNGRSVLAKVVDECDTINGCDKAHAHQPPCRNNIVDGSNGVWHALGLDINVGEEPVVWSDA"
     misc_feature    259..642
                     /gene="LOC101211270"
                     /note="double-psi beta-barrel fold of the kiwellin family;
                     Region: DPBB_kiwellin-like; cd22270"
                     /db_xref="CDD:439250"
     misc_feature    order(265..267,271..273,352..369,427..432,436..438,
                     496..501,505..507)
                     /gene="LOC101211270"
                     /note="putative effector binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:439250"
ORIGIN      
atggcaaaattggcttgcttggtctcttttttctttttggttctttctcttttgggcctttctcaagcaatctcttcttgcagggagccatgtcaaaccttgaaaaattgtaaaggtcaattgatttgtataaatggccaatgtaatgatgatcccgatgttggaactcgcatttgttcaaccgacagtgataacggagcagatggagaaaaatttcgttgtgaggcatttggaagattacattgcaaaggcaaatcgttcccccaattcaaatgctcgcctcgagtgacttcctcaactcgagctatcctaacaaataatgactttagtaaaggtggggatggaggagacccgtctgagtgtgatggaaagttccatcataactctcaaccaatagtggcattgtccacgggttggtacaacgggggatctagatgtggaaagaaaattagaattacagcgagaaatggacggtcggttttggctaaggtggtggacgagtgtgatacaattaatggatgcgataaggcacatgctcaccaaccaccgtgtcgaaacaatatcgtggatggttctaatggagtgtggcatgctttagggcttgatataaatgttggtgaagaacctgtcgtctggtcagatgcttga
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]