2025-04-04 14:04:21, GGRNA.v2 : RefSeq release 228 (Jan, 2025)
LOCUS XM_008903830 587 bp mRNA linear PLN 27-AUG-2014 DEFINITION Phytophthora parasitica INRA-310 hypothetical protein partial mRNA. ACCESSION XM_008903830 VERSION XM_008903830.1 DBLINK BioProject: PRJNA259235 KEYWORDS RefSeq. SOURCE Phytophthora nicotianae INRA-310 ORGANISM Phytophthora nicotianae INRA-310 Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae; Phytophthora. REFERENCE 1 (bases 1 to 587) AUTHORS Russ,C., Tyler,B., Panabieres,F., Shan,W., Tripathy,S., Grunwald,N., Machado,M., Johnson,C.S., Arredondo,F., Hong,C., Coffey,M., Young,S.K., Zeng,Q., Gargeya,S., Fitzgerald,M., Abouelleil,A., Alvarado,L., Chapman,S.B., Gainer-Dewar,J., Goldberg,J., Griggs,A., Gujja,S., Hansen,M., Howarth,C., Imamovic,A., Ireland,A., Larimer,J., McCowan,C., Murphy,C., Pearson,M., Poon,T.W., Priest,M., Roberts,A., Saif,S., Shea,T., Sykes,S., Wortman,J., Nusbaum,C. and Birren,B. CONSRTM The Broad Institute Genomics Platform TITLE The Genome Sequence of Phytophthora parasitica INRA-310 JOURNAL Unpublished REFERENCE 2 (bases 1 to 587) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (25-AUG-2014) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 587) AUTHORS Russ,C., Tyler,B., Panabieres,F., Shan,W., Tripathy,S., Grunwald,N., Machado,M., Johnson,C.S., Arredondo,F., Hong,C., Coffey,M., Young,S., Zeng,Q., Gargeya,S., Fitzgerald,M., Abouelleil,A., Alvarado,L., Chapman,S.B., Gainer-Dewar,J., Goldberg,J., Griggs,A., Gujja,S., Hansen,M., Howarth,C., Imamovic,A., Ireland,A., Larimer,J., McCowan,C., Murphy,C., Pearson,M., Poon,T.W., Priest,M., Roberts,A., Saif,S., Shea,T., Sykes,S., Wortman,J., Nusbaum,C. and Birren,B. CONSRTM The Broad Institute Genomics Platform TITLE Direct Submission JOURNAL Submitted (06-NOV-2013) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_008649002). FEATURES Location/Qualifiers source 1..587 /organism="Phytophthora nicotianae INRA-310" /mol_type="mRNA" /strain="INRA-310" /db_xref="taxon:761204" /chromosome="Unknown" gene 1..587 /locus_tag="PPTG_22420" /db_xref="GeneID:20191019" CDS 1..324 /locus_tag="PPTG_22420" /codon_start=1 /product="hypothetical protein" /protein_id="XP_008902078.1" /db_xref="GeneID:20191019" /translation="
MNASPPCLQATRWIFSLLAAAAGRADPKSEPETKPKPSDAKEEAVSRRHEEIRCRELIRLSGAATGSLGRLRLKRGKNAGSAPRWTTISSSSPAQHYEDEQLQAERP"
ORIGIN
atgaatgcttcacctccctgtctgcaagccactcgctggattttttcgctcctggctgccgccgctggtcgagctgatcccaagtctgaaccagagaccaagccaaagcccagcgacgcgaaggaggaagccgtatcgcgacgccacgaagaaatcaggtgtcgcgagctcattcgactgagcggtgcagcgacgggatctcttgggcggcttcgcttgaagcgcggcaaaaacgccggaagcgcgccacgctggacaacgatctcgtcgtcaagtccagcgcagcactacgaagacgagcagctccaggccgagcgaccttgaacggtggcttcatataggccggcaaggcctgcagcccacgttggcacatgggatatcatcgcgaagccgccagatcatgttcgatcacgacgccgcgtccatctcaccgcgacccgaccttgaaccaacccggcttctatagtacacgatatcggtgatcgcaggctcctactcctctcgcaggtcaccactcaatacaattcccctttcaactagtcttttgtagctatataatataacagacctattcgttttcgcagaga
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@meso_cacase at
DBCLS
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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