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2024-11-01 09:59:01, GGRNA.v2 : RefSeq release 226 (Sep, 2024)

LOCUS       XM_007144500            2020 bp    mRNA    linear   PLN 12-MAR-2014
DEFINITION  Phaseolus vulgaris hypothetical protein (PHAVU_007G166300g) mRNA,
            complete cds.
ACCESSION   XM_007144500
VERSION     XM_007144500.1
KEYWORDS    RefSeq.
SOURCE      Phaseolus vulgaris
  ORGANISM  Phaseolus vulgaris
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50
            kb inversion clade; NPAAA clade; indigoferoid/millettioid clade;
            Phaseoleae; Phaseolus.
REFERENCE   1  (bases 1 to 2020)
  AUTHORS   Schmutz,J., McClean,P., Shu,S., Cregan,P., Rokhsar,D. and
            Jackson,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-APR-2013) US DOE Joint Genome Institute, Mitchell
            Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_023753).
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Phaseolus vulgaris"
                     /mol_type="mRNA"
                     /cultivar="G19833"
                     /db_xref="taxon:3885"
                     /chromosome="7"
     gene            1..2020
                     /locus_tag="PHAVU_007G166300g"
                     /db_xref="GeneID:18626115"
     CDS             130..1863
                     /locus_tag="PHAVU_007G166300g"
                     /note="encoded by transcript PHAVU_007G1663001m"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="XP_007144562.1"
                     /db_xref="Phytozome:Phvul.007G166300.1.p"
                     /db_xref="GeneID:18626115"
                     /translation="
MMKNQPSQWWWLESHNNTRRSPWLQSTLTELNEKTKAMLKLIEEDADSFAQRAEMYYKKRPQLVSMVEDFYRTHRSLVERYDQVTGIRQQKTGGSPFSPLKHHQPEKLMSFTDDNYDSYYESCDVEESGESEIDDPEQEEEEDTKFNNNAELEEVQFVAANDVMEIERLGEENKDHNDHNKQKYNIYEAVMLREEIEQLRKENRVQKDELNPKSIICGELLMLREEIGRLGKENRAEKDELNQKDIICGEAMMLREEIEQLGKENRVLKDEINQKSIICGEVMMLREEIEQLRKENRGQKDELNQKDIICGEAMLLREEIEQLGKENRVLKDELNQKSIICGEVMMLREEIEQLRKENREHKDELNQKDNICGEIMMLREEIEQLGKENGALKDELNQKYIICGEVMMLREEIQQLRKENRGQKDELDQIDINSEVTMSREEIEVYIKENRVKNDELKPKGNVCGEVVMLREEIERLRKDERAQKSTLCGEVMKLKQENSAQKDHLKKKDQEKIEVIRHLSLAIDMLKQENVKMRSFIAKESTNKWKNPFGFKNFMGSLSGQLFNGLTKNQPSLVAL"
     misc_feature    154..375
                     /locus_tag="PHAVU_007G166300g"
                     /note="KIP1-like protein; Region: KIP1; pfam07765"
                     /db_xref="CDD:429647"
     misc_feature    706..1476
                     /locus_tag="PHAVU_007G166300g"
                     /note="Uncharacterized coiled-coil protein, contains
                     DUF342 domain [Function unknown]; Region: COG1340"
                     /db_xref="CDD:440951"
ORIGIN      
tgaactctatttccatcataggcggtggtggcaagcatagcattaattcatctcagattttttctctttcttcttcttcttccatgctcttggtgttcgtgataacatagataactgaggagggctaaaatgatgaagaatcaaccgtcacagtggtggtggcttgagagccacaataacacaagacgatccccttggcttcaatccactctcacagagctaaatgagaagacaaaggcaatgttaaaactaattgaagaagatgcagattcctttgcccaacgtgcagagatgtattacaagaagagaccacagcttgtgagcatggttgaagatttctataggacacatcgatcattagttgagcggtatgatcaagtcactggaattcgtcagcagaagactggaggatcccccttttctccactcaagcatcatcaaccagagaagttgatgagttttactgatgacaattatgatagctattatgagagttgtgatgtggaggagtctggggaatctgaaattgacgatcctgagcaagaagaggaagaggatacaaaattcaataacaatgcagaactggaggaagttcagtttgtggctgcaaatgatgtgatggaaattgagagacttggtgaagagaacaaggatcataacgatcacaacaagcagaaatataacatttacgaagcagtgatgttgagggaagaaatagagcaactcagaaaagagaacagagttcagaaggatgaactcaacccgaaaagcatcatttgtggtgaattgttgatgctgagggaagaaataggacgactcggaaaggagaacagagcggagaaggatgaactcaaccagaaagatatcatttgtggtgaagcaatgatgttgagggaagaaatagaacaacttggtaaagagaacagagttctgaaggatgaaataaatcagaaaagtatcatttgtggtgaagtaatgatgttgagggaagaaatagagcaactcagaaaagagaatagagggcagaaggatgaactcaaccagaaagatatcatttgtggtgaagcaatgctgttgagggaagaaatagaacaactcggtaaggagaatagagttctgaaggatgaactaaatcagaaaagtatcatttgtggtgaagtaatgatgttgagggaagaaatagagcaactcagaaaagagaatagagaacataaggatgaactcaaccagaaagataacatttgcggtgaaataatgatgttgagggaagaaatagaacaattgggaaaagagaatggagcgctgaaggatgaactcaaccagaaatatatcatttgtggagaagtaatgatgttgagggaagaaatacaacaactcagaaaagagaatagagggcagaaggatgaactcgaccagatagatatcaatagtgaagtaacgatgtcgagggaagaaattgaagtatacataaaagagaatagagtcaagaatgatgaactcaagccgaaaggtaacgtttgtggtgaagtagtgatgttgagggaagaaatagaacgactcagaaaagatgaaagagcacaaaaaagtaccctttgtggtgaagtgatgaagttaaagcaagagaatagcgcacagaaggaccatctcaagaaaaaagaccaagagaaaatagaggtaataagacacctgagtttagctatagatatgctgaagcaggagaatgtaaagatgagaagcttcattgctaaggaatctaccaacaaatggaagaatccgtttggatttaagaatttcatgggatcattatcggggcagttgtttaatggacttacaaagaatcaacctagtcttgtagctctctagataaggttcacagagtaaatagctaagttttgtagaacaatattagaagagacctatgtacatgtcatggggacttgctcgagtaacctacagatcttgtatacagtttagtatattcctaacaaatccgagtctctagtggatttcctttgcactt
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]