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2025-08-29 22:30:17, GGRNA.v2 : RefSeq release 231 (Jul, 2025)

LOCUS       NR_199403               1460 bp    rRNA    linear   BCT 28-APR-2025
DEFINITION  Acidovorax sacchari strain HC-21 16S ribosomal RNA, partial
            sequence.
ACCESSION   NR_199403
VERSION     NR_199403.1
DBLINK      Project: 33175
            BioProject: PRJNA33175
KEYWORDS    RefSeq.
SOURCE      Acidovorax sacchari
  ORGANISM  Acidovorax sacchari
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Acidovorax.
REFERENCE   1
  AUTHORS   Sawada,H., Shinohara,H., Takashima,Y., Naito,K. and Satou,M.
  TITLE     Acidovorax sacchari sp. nov., a pathogen causing red stripe of
            sugarcane in Japan
  JOURNAL   Int J Syst Evol Microbiol 75 (2) (2025)
   PUBMED   39907557
  REMARK    DOI:10.1099/ijsem.0.006575
REFERENCE   2  (bases 1 to 1460)
  CONSRTM   NCBI RefSeq Targeted Loci Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2025) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1460)
  AUTHORS   Sawada,H. and Takashima,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2024) Contact:Hiroyuki Sawada National
            Agriculture and Food Research Organization, Research Center of
            Genetic Resources; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602,
            Japan URL
            :https://www.naro.go.jp/english/laboratory/ngrc/index.html
COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
            reference sequence is identical to LC797517.1:1-1460.
FEATURES             Location/Qualifiers
     source          1..1460
                     /organism="Acidovorax sacchari"
                     /mol_type="rRNA"
                     /strain="HC-21"
                     /isolation_source="leaf of sugar cane"
                     /host="Saccharum officinarum"
                     /culture_collection="MAFF:311313"
                     /db_xref="taxon:3230736"
                     /geo_loc_name="Japan:Okinawa"
                     /collection_date="2001-11"
                     /collected_by="Hirosuke Shinohara"
     rRNA            <1..>1460
                     /product="16S ribosomal RNA"
ORIGIN      
attgaacgctggcggcatgccttacacatgcaagtcgaacggtaacaggtcttcggatgctgacgagtggcgaacgggtgagtaatacatcggaacgtgcccgatcgtgggggataacgaggcgaaagctttgctaataccgcataagatctatggatgaaagcaggggaccgcaaggccttgcgcgaacggagcggccgatggcagattaggtagttggtggggtaaaggcttaccaagcctacgatctgtagctggtctgagaggacgaccagccacactgggactgagacacggcccagactcctacgggaggcagcagtggggaattttggacaatgggcgcaagcctgatccagccatgccgcgtgcaggatgaaggccttcgggttgtaaactgcttttgtacggaacgaaaagccttcttctaataaagggaggtcatgacggtaccgtaagaataagcaccggctaactacgtgccagcagccgcggtaatacgtagggtgcaagcgttaatcggaattactgggcgtaaagcgtgcgcaggcggtgatgtaagacagatgtgaaatccccgggctcaacctgggaactgcatttgtgactgcatcgctggagtacggcagagggggatggaattccgcgtgtagcagtgaaatgcgtagatatgcggaggaacaccgatggcgaaggcaatcccctgggcctgtactgacgctcatgcacgaaagcgtggggagcaaacaggattagataccctggtagtccacgccctaaacgatgtcaactggttgttgggtcttcactgactcagtaacgaagctaacgcgtgaagttgaccgcctggggagtacggccgcaaggttgaaactcaaaggaattgacggggacccgcacaagcggtggatgatgtggtttaattcgatgcaacgcgaaaaaccttacccacctttgacatgtacggaatcctttagagatagaggagtgctcgaaagagaaccgtaacacaggtgctgcatggctgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaacccttgccattagttgctacgaaagggcactctaatgggactgccggtgacaaaccggaggaaggtggggatgacgtcaagtcctcatggcccttataggtggggctacacacgtcatacaatggctggtacagagggttgccaacccgcgagggggagctaatcccataaagccagtcgtagtccggatcgcagtctgcaactcgactgcgtgaagtcggaatcgctagtaatcgcggatcagaatgtcgcggtgaatacgttcccgggtcttgtacacaccgcccgtcacaccatgggagcgggttctgccagaagtaggtagcctaaccgtaaggagggcgcttaccacggcagggttcgtgactggggtgaagtcgtaa
//

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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]