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2024-04-26 15:14:23, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       NR_176814               2849 bp    RNA     linear   ROD 12-JUL-2022
DEFINITION  Rattus norvegicus cut-like homeobox 1, pseudogene 1 (Cux1-ps1),
            non-coding RNA.
ACCESSION   NR_176814 XM_039108675
VERSION     NR_176814.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000142.1.
            
            On Jul 7, 2022 this sequence version replaced XM_039108675.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR8487227.237441.1 [ECO:0000345]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2849              JACYVU010000142.1  3503215-3506063
FEATURES             Location/Qualifiers
     source          1..2849
                     /organism="Rattus norvegicus"
                     /mol_type="transcribed RNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q24"
     gene            1..2849
                     /gene="Cux1-ps1"
                     /note="cut-like homeobox 1, pseudogene 1"
                     /pseudo
                     /db_xref="GeneID:681658"
                     /db_xref="RGD:1592878"
     misc_RNA        1..2849
                     /gene="Cux1-ps1"
                     /product="cut-like homeobox 1, pseudogene 1"
                     /pseudo
                     /db_xref="GeneID:681658"
                     /db_xref="RGD:1592878"
     exon            1..2849
                     /gene="Cux1-ps1"
                     /inference="alignment:Splign:2.1.0"
                     /pseudo
ORIGIN      
actccatctcaatatgtctcaagatggcggccaatgtgggatcgatgtttcaatattggaagcgctttgatttacagcagctgcagagagaacttgatgccaccgcaacagtattggcaaacaggcaagatgagagcgaacagtccagaaagcggctcattgagcagagccgagaattcaagaagaacactccagaggatttacgcaagcaggtagcaccactgctcaagagcttccaaggggagattgatgcactgagtaaaaggagcaaagaagcagaagcagccttcttgactgtgtacaagagactaattgatgttccagatcccgtaccagccctggacctcgggcaacagctggaaataaaagtgcagcgtctacacgacattgaaacagagaaccagaaacttagggaaacactagaagagtacaacaaggagtttgctgaagtgaaaaaccaagaggttacggtaaaagcacttaaggagaaaatccgagaatacgagcagaccctgaagagtcaggccgagaccatcgctctggagaaggagcagaagctacaaaatgattttgcagagaaggagagaaagctgcaagagacacagatgtccaccacctcaaagctggaggaagctgagcacaaactccagactctgcaaacagccctggaaaaaactcgaacagaattatttgacctgaaaaccaaatacgatgaagaaaccactgcaaaggccgacgagatcgagatgatcatgactgaccttgaacgagccaaccagagggcagaggtggcacagagagaggcagagactttaggggaacagctttcatcggccaaccactctctccaactggcctcgcagatccagaaggctccagatgtggccatagaggtgctgacccgatccagcctggaagtagagttggctgccaaagagcgggagattgcccagctggtggaagatgtgcagcgactccaggccagcctcaccaagctgcgtgagaattccgccagccagatctcacagctggagcagcagctgaacgccaagaatagcacactcaaacaactggaagaaaaactcaaaggccaggctgactatgaagatgtgaagaaagagttgaccactctgaagtccatggagtttgcaccatcggagggagcagggacacaggactcaaccaagcccctggaggttttactcctggagaagaaccgctcgctgcagtccgagaatgccacgctgcgcatctccaacagtgacctgagcgggcgctgtgcggagctgcagatccatctcactgaggccacagccaaggccgttgagcagaaggagctgatcgctcgcttggagcaggacctcagcaccatccagtccatccaacgccctgatgctgagggagcttccgagcaaggcctagagaagattccagagcccatcaaggaggccacagctctgttttatggaccctcagtgtcatccagtgggaccctcccagaaggtcaggtggactccctactttccatcatctccagccaaagggaacgtttccgcacccggaaccaagagctggaggctgagagccgtatggcccagcacaccatccaggccctgcagagcgagctggacagcctgcgtgccgacaacatcaagctttttgagaagatcaagttcttgcagagttaccctggccggggtatcggcagtgacgacacggagctgcggtactcctcccagtacgaggaacgcctggaccctttctcctccttcagcaagagggagcggcagagaaaatacctgggcctgagcccctgggacaaggccacacttggcatggggcatctgattctctccaacaaaatggcccgcaccattggcttcttctacaccttgttcctgcactgtctggtctttctggtactgtacaagctggcatggagtgagagcgtggagagagactgtgctgccacctgcgccaagaagttcgccgatcatctgcacaaattccatgagagtgacaatggagcagcagctggcgacttatggcagtgacccccaggctcaccggagatgtattggctgctaccccgtcccttgcttgatcagctgcttctaatgacatagccttccccttcccccccacaaaaaaatcccccacggatttgtctctgtcctcatccaacagctgccggaagcccagagcctctagaacccctttcaaaggttgtcacaaccccattggagccccaaggttcaaacaacccctagcaaccagctagggtggactccctgagtctctgccctcggtctagtcacctgacctgggctccacccacatcagaacctctagccctggtggcagagctttctgactgtgatacatattgtcagcacccactccggcattcctataggctctcgtaggaccctgccacataataaaataggtgggagtcttctgggccccagcttctcatccgccctcttccccggcagggcgggaggtggctttgatacaaccctaaccacagtctccaagtcagggagccccagagggcgggatggtttccactaccccttccctgcacccagtccatgatttgagttctgcttgcttctttggcaaaatattttggtttctagaagaggaagtctctccaatgaggcccctgtgcctcaggcaccacagacatggtcccagaggccccagcaaaacttgtcctgggccatgatagcaaggccaactctcaggacctcagatcttcctccgctggatttgatctttttcttcagcttcgcatgaaataaagaatcattgcagccacaaaaaaaaaaaaaaaaaaagaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]