2024-04-27 09:57:36, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001303850 1275 bp mRNA linear VRT 13-MAY-2020 DEFINITION Esox lucius claudin-4-like (LOC105029466), mRNA. ACCESSION NM_001303850 XM_010902873 VERSION NM_001303850.1 KEYWORDS RefSeq. SOURCE Esox lucius (northern pike) ORGANISM Esox lucius Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes; Esocidae; Esox. REFERENCE 1 (bases 1 to 1275) AUTHORS Leong JS, Jantzen SG, von Schalburg KR, Cooper GA, Messmer AM, Liao NY, Munro S, Moore R, Holt RA, Jones SJ, Davidson WS and Koop BF. TITLE Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome JOURNAL BMC Genomics 11, 279 (2010) PUBMED 20433749 REMARK Publication Status: Online-Only COMMENT PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from BT079217.1. On Jan 13, 2015 this sequence version replaced XM_010902873.1. ##Evidence-Data-START## Transcript is intronless :: BT079217.1 [ECO:0000345] ##Evidence-Data-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-1275 BT079217.1 6-1280 FEATURES Location/Qualifiers source 1..1275 /organism="Esox lucius" /mol_type="mRNA" /db_xref="taxon:8010" /chromosome="1" /map="1" gene 1..1275 /gene="LOC105029466" /gene_synonym="Claudin-4; CLD4" /note="claudin-4-like" /db_xref="GeneID:105029466" exon 1..1275 /gene="LOC105029466" /gene_synonym="Claudin-4; CLD4" /inference="alignment:Splign:2.1.0" misc_feature 70..72 /gene="LOC105029466" /gene_synonym="Claudin-4; CLD4" /note="upstream in-frame stop codon" CDS 103..738 /gene="LOC105029466" /gene_synonym="Claudin-4; CLD4" /codon_start=1 /product="uncharacterized protein LOC105029466" /protein_id="NP_001290779.1" /db_xref="GeneID:105029466" /translation="
MVSMGKQMLGLALALIGFLGTIIVCALPMWKVTAFIGANIVTAQVIWEGVWMNCVTQSTGQMQCKIYDSVLALPQDLQVARAMLVIAIIVAFLGILLCILGGKCTNFIEDEVSKVKVVIASGVIFILAGILILVPVCWTANTIIRDFYNPLLIEAQRRELGASLYIGWATAGLLILGGGLLCSSCPPKQEHDNYPVKYSQAKSTATSQAYV"
misc_feature 112..615 /gene="LOC105029466" /gene_synonym="Claudin-4; CLD4" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" ORIGIN
agtcaacaacgatttaaaccaacctgaactaacctgaggatcttgtctacaaactctgactacacttactaattttgcaacaagacacaagaagtcttcagcatggtgtcgatgggaaaacagatgctgggcctagccctggctctcattgggttcctggggaccatcattgtgtgcgccttgcctatgtggaaagttacagccttcatcggtgccaacatagtaacggctcaggtcatctgggagggtgtgtggatgaactgtgtgacccagagcacgggacaaatgcagtgcaagatttacgactccgtcttggctttaccccaggacctgcaggttgccagagctatgctggtcattgccatcattgtggcatttttgggcattttactgtgcattttgggaggaaagtgtaccaacttcatagaagatgaggtgtcaaaagttaaagtagtcattgccagtggggtcattttcattttggctggcattctcatccttgtcccagtctgctggacagccaacaccatcatcagggacttctacaaccctctgctgatcgaggcccagaggagggagctgggagcatcactgtacattggctgggccaccgcaggtctcctgatcctgggaggagggctcctctgcagctcctgcccacctaagcaagaacatgacaactacccagtcaagtactcacaggcaaagtccacagctaccagccaagcctacgtttgagcttgaaactgactttgaattattaaaagatgatctttgttatgtgaagattatctttggtaatcctctctagatgggaattgaaaagtgactggtattatcaagctctttacattgtgtaactatataaaaacatttcgacatggatataaaatcagaacagagtctgtgaaaatgtatttaatgagcacttatgaactatgcaagaaaaataataacaatacaaataattagtgctactgtgtatagtattttgtatggaaatagccatggagtgatgactgaatggaagccttttccctagtccaaaactctcatttattgtaaaagtacagcgtttattgaagttataatatcaatattcatttaataacatgtactaatgtgagaatgaaactatattctgtataaatgtatcattgacctgtaataaattatttttttttaccattgatcactgtattttgcaatttttgcattttaaatgttgattgcttgttgattgtatgcaatgtgtttaaataaagtccacggtac
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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