2024-04-25 08:47:46, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001159777 744 bp mRNA linear MAM 19-FEB-2022 DEFINITION Sus scrofa claudin 20 (CLDN20), mRNA. ACCESSION NM_001159777 XM_001929070 VERSION NM_001159777.1 KEYWORDS RefSeq. SOURCE Sus scrofa (pig) ORGANISM Sus scrofa Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus. COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from FJ875105.1. On May 8, 2009 this sequence version replaced XM_001929070.1. ##Evidence-Data-START## Transcript is intronless :: FJ875105.1 [ECO:0000345] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..744 /organism="Sus scrofa" /mol_type="mRNA" /db_xref="taxon:9823" /chromosome="1" /map="1" gene 1..744 /gene="CLDN20" /note="claudin 20" /db_xref="GeneID:100153817" exon 1..744 /gene="CLDN20" /inference="alignment:Splign:2.1.0" CDS 28..687 /gene="CLDN20" /codon_start=1 /product="claudin-20 precursor" /protein_id="NP_001153249.1" /db_xref="GeneID:100153817" /translation="
MASAGLQLLAFALALSGVSGVLTATLLPNWKVNVDAGSNIITAIVQLQGLWMDCTWYSTGMFSCSLKDSVLGLPTHVQAARAAMVLACVLSALGICTCTVGMKCTRLGGDRESKSHTCFAGGVCLVSAGISSLTPTVWYTKEIIANFLDLTVPESNKHEPGGAVYIGFISAMLLFISGLIFCTSCVKKRAEALLYPSKQQHIPISQPEDNSAYSLKDYV"
sig_peptide 28..87 /gene="CLDN20" /inference="COORDINATES: ab initio prediction:SignalP:4.0" misc_feature 76..570 /gene="CLDN20" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" ORIGIN
tacgaggacaaaggtaacggtgatgtcatggcttcggcgggtctccagctcctcgctttcgccctggccttatctggggtctctggggtcctcacggccactctgctgcccaactggaaggtgaatgtggacgcgggctccaacatcatcacggccatcgtgcagctgcaagggctgtggatggactgcacgtggtacagcactgggatgttcagctgctccctgaaggactccgtcctgggcctccccacccacgtgcaggccgcgcgggccgccatggtgctggcctgcgttctgtctgctctggggatctgcacttgcacagtggggatgaagtgcactcgcttaggcggggacagggaaagcaagagtcacacctgttttgctggaggcgtctgcctcgtgtctgcgggcatctccagtctcacacccacagtgtggtacaccaaggagatcatcgccaactttctggatctgacggttccagaaagcaacaaacatgaacccggaggagcggtctacatcggattcatttccgccatgctgctgtttatctctggcctgattttctgcacatcttgtgtgaaaaagagagcagaagctttgctctacccatccaagcagcaacatatccccatctcgcagccagaggacaattcagcatacagcctgaaggattacgtgtaaacagctgtgtgatgcacatggagttttcaggtgcctgccgtgacttctgcctttctt
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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