LOCUS       NM_001095723             804 bp    mRNA    linear   VRT 17-DEC-2022
DEFINITION  Xenopus laevis ladybird homeobox 1 L homeolog (lbx1.L), mRNA.
ACCESSION   NM_001095723
VERSION     NM_001095723.1
KEYWORDS    RefSeq.
SOURCE      Xenopus laevis (African clawed frog)
  ORGANISM  Xenopus laevis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae;
            Xenopus; Xenopus.
REFERENCE   1  (bases 1 to 804)
  AUTHORS   Martin BL and Harland RM.
  TITLE     A novel role for lbx1 in Xenopus hypaxial myogenesis
  JOURNAL   Development 133 (2), 195-208 (2006)
   PUBMED   16339190
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from DQ294722.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DQ294722.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00012419, SAMN04111048
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Xenopus laevis"
                     /mol_type="mRNA"
                     /db_xref="taxon:8355"
                     /chromosome="7L"
                     /map="7L"
     gene            1..804
                     /gene="lbx1.L"
                     /gene_synonym="hpx-6; hpx6; lbx1h"
                     /note="ladybird homeobox 1 L homeolog"
                     /db_xref="GeneID:734237"
                     /db_xref="Xenbase:XB-GENE-6251676"
     CDS             1..804
                     /gene="lbx1.L"
                     /gene_synonym="hpx-6; hpx6; lbx1h"
                     /note="ladybird homeobox protein homolog 1; lbx1; ladybird
                     homeobox 1 transcription factor"
                     /codon_start=1
                     /product="transcription factor LBX1"
                     /protein_id="NP_001089192.1"
                     /db_xref="GeneID:734237"
                     /db_xref="Xenbase:XB-GENE-6251676"
                     /translation="

MTSKDEAKSSASSVEERRRNALDLLPPPANSNKPLTPFSIEDILNKPSVRRSYTICGTAHLLSSADKPPAAGLPLSSRALLSQTSPLCALEELASKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADVESTKKMSPSAVEAVLTISELEESGSERGNSRSRSPQLGLTSNHMPLSPSXPLTDQHASKECSEDEEDVEIDVDD"

     misc_feature    1..108
                     /gene="lbx1.L"
                     /gene_synonym="hpx-6; hpx6; lbx1h"
                     /note="propagated from UniProtKB/Swiss-Prot (Q2PYN8.1);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     misc_feature    order(382..396,400..402,451..453,469..471,508..510,
                     514..519,526..531,535..543,547..552)
                     /gene="lbx1.L"
                     /gene_synonym="hpx-6; hpx6; lbx1h"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     misc_feature    388..549
                     /gene="lbx1.L"
                     /gene_synonym="hpx-6; hpx6; lbx1h"
                     /note="Homeobox domain; Region: Homeobox; pfam00046"
                     /db_xref="CDD:425441"
     misc_feature    order(388..390,397..399,517..519,526..531,538..540)
                     /gene="lbx1.L"
                     /gene_synonym="hpx-6; hpx6; lbx1h"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:238039"
     misc_feature    622..801
                     /gene="lbx1.L"
                     /gene_synonym="hpx-6; hpx6; lbx1h"
                     /note="propagated from UniProtKB/Swiss-Prot (Q2PYN8.1);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     exon            1..331
                     /gene="lbx1.L"
                     /gene_synonym="hpx-6; hpx6; lbx1h"
                     /inference="alignment:Splign:2.1.0"
     exon            332..804
                     /gene="lbx1.L"
                     /gene_synonym="hpx-6; hpx6; lbx1h"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

atgacttccaaagatgaagccaagtcgtccgcgtcctcggtggaggaaagaagaaggaatgccttggaccttttaccacctcctgctaattctaacaagcccctgactcctttcagcattgaggatatcctaaacaagccctcagtccggagaagttacaccatatgtgggacagctcacctactaagcagcgcagataagcctcctgctgcagggctgcccctgtccagcagagcccttctgtcccaaacctcccctctctgtgctctggaagagctggccagcaagacctttaaaggtctggaagtgagtgtcctgcaggcagcagaaggtcgagatgggatgacaatttttggccaaagacagacccctaaaaagaggagaaagtccagaacagcttttacgaaccaccagatttatgagttggagaaacgatttttgtatcagaaatatttatctccggccgaccgtgatcagatcgcccagcagttgggactgaccaatgcccaggtgatcacctggttccagaatcgcagggccaagctgaagagggatctggaggagatgaaggcagatgtggagtcaaccaaaaagatgagcccttcagcagtagaagcagtgctcaccatctctgagttggaagagagcgggtctgagcgaggaaacagtcgcagtaggtcgccccaacttggactaacatcgaaccacatgcccctntccccttcctntccgctcacagaccagcacgcgagcaaggagtgctcggaggatgaggaggatgtggaaattgatgtagacgactga

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