2024-04-19 12:16:34, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001092351 1060 bp mRNA linear VRT 24-JUN-2020 DEFINITION Xenopus laevis claudin 5 (transmembrane protein deleted in velocardiofacial syndrome) S homeolog (cldn5.S), mRNA. ACCESSION NM_001092351 VERSION NM_001092351.1 KEYWORDS RefSeq. SOURCE Xenopus laevis (African clawed frog) ORGANISM Xenopus laevis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus. REFERENCE 1 (bases 1 to 1060) AUTHORS Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW and Richardson P. TITLE Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative JOURNAL Dev. Dyn. 225 (4), 384-391 (2002) PUBMED 12454917 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC073390.1. ##Evidence-Data-START## Transcript exon combination :: BC073390.1 [ECO:0000332] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..1060 /organism="Xenopus laevis" /mol_type="mRNA" /db_xref="taxon:8355" /chromosome="1S" gene 1..1060 /gene="cldn5.S" /gene_synonym="claudin-5" /note="claudin 5 (transmembrane protein deleted in velocardiofacial syndrome) S homeolog" /db_xref="GeneID:444247" /db_xref="Xenbase:XB-GENE-17332561" exon 1..1060 /gene="cldn5.S" /gene_synonym="claudin-5" /inference="alignment:Splign:2.0.8" misc_feature 153..155 /gene="cldn5.S" /gene_synonym="claudin-5" /note="upstream in-frame stop codon" CDS 168..818 /gene="cldn5.S" /gene_synonym="claudin-5" /codon_start=1 /product="claudin 5 (transmembrane protein deleted in velocardiofacial syndrome) S homeolog" /protein_id="NP_001085820.1" /db_xref="GeneID:444247" /db_xref="Xenbase:XB-GENE-17332561" /translation="
MASVGMEILGLSLSTLGWVGVILACGLPMWQVSAFIENNIVVAQIIWEGLWMTCVVQSTGQMQCKVYDSILALSPELQAGRALTVLASMVGLIGLLVTVVGAKCTNCLHGSSVKGRVLLAGGIIYILCGILVLIPLCWIANIIITEFYDPRVPAPQKREMGAALYVGWAATSLLMLGGSLLCGSFAMKDGISNLPVKYSAPRMPTSNGDYDKKNYV"
misc_feature 180..677 /gene="cldn5.S" /gene_synonym="claudin-5" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" ORIGIN
gaaggagcaaaggagagagtggggggagctggtggtaccacagaaagggaagctccggcacaggaaaacacttatccagttgtctacttgggccacagagtgaaaactaaagaagctccagagaagcagcaggtcgcacttacaattagccgtgagcaagtgtggaaatggcatcggtaggaatggagatcctgggtctgtcgctgagcaccctgggctgggtgggggtgatcctggcatgcgggctccccatgtggcaagtgtcagccttcatagagaataacatcgtggtggcgcagattatctgggaaggtctgtggatgacttgcgtggtgcaaagtacggggcagatgcagtgcaaagtctacgactccatcctcgcccttagccctgagctccaggctggcagagccctcactgtactggcctctatggtggggctcattgggctactggtcaccgtggtgggcgctaagtgcaccaactgcctgcatgggagcagcgtgaagggccgggtgctgctcgccggggggatcatctacattctctgcgggatcctggtgctcatcccgctctgctggatcgccaatatcatcattaccgagttctacgaccctcgggtgccggccccccaaaagcgagagatgggggccgctttgtatgtaggatgggcggccacttccctgctcatgcttgggggctccctcctgtgcggctcgttcgctatgaaagatggaatcagcaacctgcccgtcaagtactccgccccccgcatgcccacctctaacggggactatgacaaaaagaactatgtgtaataggggaggggtcgcagggaacacgagatcttacccactgctggactgtgacctgtacatacagtaaattggctcttccctccggcagtaacttcccccgtgcgggttcagacacttaccgacctggtgagcagcttcttctgtcaactggtacccagtcagctgtgttccatggacttgccagcgaccccgtccggttgggttcattacagatgaccagcaatgtaaaaaaaaaaaaaaaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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