LOCUS       XM_021467634            6250 bp    mRNA    linear   VRT 15-JUN-2017
DEFINITION  PREDICTED: Danio rerio nucleoporin 205 (nup205), transcript variant
            X1, mRNA.
ACCESSION   XM_021467634
VERSION     XM_021467634.1
DBLINK      BioProject: PRJNA13922
KEYWORDS    RefSeq.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_007129.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Danio rerio Annotation Release 106
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6250
                     /organism="Danio rerio"
                     /mol_type="mRNA"
                     /strain="Tuebingen"
                     /db_xref="taxon:7955"
                     /chromosome="18"
     gene            1..6250
                     /gene="nup205"
                     /gene_synonym="zgc:111802"
                     /note="nucleoporin 205; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 14 ESTs, 1
                     Protein, and 98% coverage of the annotated genomic feature
                     by RNAseq alignments, including 5 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:445382"
                     /db_xref="ZFIN:ZDB-GENE-040715-8"
     CDS             32..6073
                     /gene="nup205"
                     /gene_synonym="zgc:111802"
                     /codon_start=1
                     /product="nuclear pore complex protein Nup205 isoform X1"
                     /protein_id="XP_021323309.1"
                     /db_xref="GeneID:445382"
                     /db_xref="ZFIN:ZDB-GENE-040715-8"
                     /translation="

MFSHRQNSGQPTHASDMATQMAVNSGASLWGPLKELWEAVEGAIWRRQPESVHLLDLQLKKHKPYFLNLFKNPPKSAEQREKVRKASTEGIAIQGQQGARLLPEQLISEAFILSDLFDLGELAALELLLAGEHQQPHFPGLTRGLVAVLLYWDGKRCVANSLRSLIQSRHGKTFTLDLSPELVNLTTRFTDELMAQGLTKQILNLVSDVSVTREFERLQKERGLGNEKHRKEVSDLIKECRQSLAECLFAWACQSPLGKDDTLALIGHLEMVTAEADGSLDSVNLALVMALLYSLDVSFLEQGTEDREDLLQALPLLTEKQYVAAVHSRLVEGQGWKLPGLQAVVQLAWALSLRALSQLPQGAALVEFTEADEALADQALLGGVFLFLTEGVLGSDGFSQEEFYTRRLHSLITDFLALMPMKVKQLRNRADEDARLIHMALQMGSEPPSSLRKDLDHLMILIGEFYSKDPFELELALEFWCPSESLQHTSLTGSFLGVPLQRPPHKQVVLSKFVRQMGDLLPATLYIPYLRMLKGLANGPQCSHYCFSLLKTNGAPHGENRQAGVSGSLVSWEHFFHSLMLYHENLRRDVPSADSTQYRHLPIRGITQRELEGLTAFLQLLTTIITWSENARLALCEHPQWTPVVVMLGLLQCSVQPVLKAQVLHVLAAFGKSPEIAASLWQSLEYTQILQTVKIPGQRQAAGIEVELNEIESSCEEYPLTRAFCHLISTLVESALPVNLGAGLRAPGFQPYLDFLRDSVFLAFPTRAYRRSAEKWEVAEAVLEVFHKLLREYEPQPSDFLPEMVELQGEQVPAHKPPGHSLMFHLLNDSPTLSLCLNLLEEGARQLDTYAQFPGKKQLESAVLHCLCLLELALQKEVTFMDLLRESQTSLLVSPLEQLLQGVSAQSRKADHITNIARYLYHSSSNPDAAFQSAKILRRITRYPNIQARLVGDFTHDQAVSERLMAGFVECLDSEEAQEGVTTNDSDSEKRVARIRHETKIHILNLLITSLELTGPNLGLYLLGYEVKKPVSSTNLQDPGVLGCPRSCLHAILSLLQRGSDSRSGPGLIKQAPQLAELCYQVIYQLCACPDTSGPTMRYLRTSQDFLFSHLQHLPFVLSENEIAALSQMSWLMKTTAIELRVTSLNRQRSHTQRLLNLLLDDQPHTLHTADGETGMEEENRSVSGFLQFGTVSKVRRRLLSVLDAIDFSQEAPELLQLDFFERTQIEQVITNCEHVNEQGHTVCNVKLLHRVLVAEINALQGMAAIGQRPLLMEEVNSVLQQVVERNRVRRSLSAKRHALQSWRSLVETILTACPSELIPADQRQLIIRDLLLDLHDKVLSEDAAGELMPIVAGAVFTLTAHLSQSVLSEQQGVGPEGGSGSGFASIANSALHLILRKLLDFILCTGGGFQRLRAHLYGALLYYLQIAQKPEEPETLQTGTSMWERLTAPEDCFSKLQRENLSIIESYGTALMEVVCRDACDGHEIGRMLALAVLDRVLSIDRQCQWLVYLCNSGYLRVLVESLKQDDVSLQTLLTPQPPLLKPLYIYESKMALLTRVAKTAQGAMELLRCGLVAQLVECQVFHMLPQNDALRVFGQRDPSGFIPSPLERYRQILLPTLRLMQVILTSTTAQHQQGAAQVLQWLIVHSDVIQSILHGQDMSMGSLQELSLLTAIISKTALPGALEMGQEINSAALMELQGHIGRFQRQSLSLLVRLVGTDRARYLKQIEDTVSPSNLAEKREEMEVAMQQICANIMEYCQTLLLQSSSEAQFSLCLFSPSASEPADVSIPSARVPSLGLVLLLLKNSASDFFRYHDSHRQSLNKLERVEQLPPEELKELCQGLVSGSGGVEKISSVQRNVLAKRRLVQLVNNRAKLLALCSYIIETCLFVIWRHLEFYLLYCTPTDPKDSLLPGYRGQLSLKLQDYFQMLLNDMVSYQIALSADPAGSRGLSVSRVSQQDLEQLQSDMSSSFSEPLQRKLLEVEGLYSKSRSRHTFIQALTRRIRGLVHHAKS"

     misc_feature    572..5068
                     /gene="nup205"
                     /gene_synonym="zgc:111802"
                     /note="Nuclear pore complex scaffold, nucleoporins
                     186/192/205; Region: Nup192; pfam11894"
                     /db_xref="CDD:432170"
ORIGIN      

taaaatctcttcacaaaagaaaccgaaagttatgttttcacaccggcagaattcagggcagcccactcacgcttcagacatggcgacgcagatggcggtaaattcaggagccagtctgtgggggccgctgaaggagctctgggaggctgtggaaggggccatttggagacgtcaaccagaaagtgttcatcttttagatctgcagttgaagaaacacaaaccctacttcctcaacctctttaaaaacccaccgaagagtgcagaacagagagagaaggttcggaaagccagtacagaaggcattgctatccagggtcagcagggagcacgactactacctgagcagctcatctctgaagccttcatccttagtgacctttttgaccttggagaactagccgccctcgagctgctgctggcaggagagcatcagcagcctcatttccccggcctgacccgaggcctggtagctgtgctcctttactgggatggtaaacgctgcgtggccaactctctccgctcacttatccagtccagacatgggaagactttcactcttgacttgagtcctgaattggtgaatctcaccacacggttcacagatgagctgatggcccagggtttgaccaagcaaatactgaacctggtctctgacgtcagcgtgacccgtgagtttgagaggctgcagaaagagcgtggccttggcaatgagaaacacaggaaagaggtatctgacctcattaaagagtgccgacagtctctggcagagtgtttgtttgcgtgggcatgccagtcaccgctaggcaaagatgacacgctggctcttattgggcatttagagatggtgaccgctgaagctgatggctctttggatagtgtcaaccttgctttggtcatggcattgctctattccctggatgttagttttctggagcaaggaacagaagatagagaagacctgctccaggctttgcctctgttgacggagaaacagtacgtggcagccgtgcacagtcggctggttgagggtcaaggctggaagcttccaggactgcaggcagtggtgcagctggcctgggcgctgtctctgagggccctttcacaacttccacagggtgcagctttagtggagttcacagaagcagatgaggctctggcggaccaggcactgttgggaggcgtcttcctctttctgacggagggcgtcctgggaagtgatggtttcagccaagaagaattttacactcggcggctgcattctctgattactgatttcctggcactcatgccaatgaaggtgaaacagttgcgcaaccgtgccgatgaagatgctcgtctgatccacatggctctgcagatgggcagcgagccgccatcatctcttcgcaaggacctggaccacctcatgatccttattggagaattttacagcaaagatccatttgaacttgagctggctttagagttttggtgtccatcagagtctcttcagcacacttcactcactggatcttttcttggagtacctctccaaagacccccacataaacaggtggttctctccaagtttgtgcgtcagatgggtgatctgcttcctgcgactctttacatcccatacctgcgaatgctgaaaggacttgcaaatggccctcagtgctcccactactgcttcagtctgcttaaaactaacggcgctccacacggagagaaccggcaggctggagtgtcaggcagtcttgtgtcatgggaacactttttccactcgctcatgctgtaccatgaaaacctgcgacgagacgtgcccagtgccgacagcacacaataccgtcatctaccaatcagaggcatcactcagagagagctggaaggtctcactgcattcctccagctgctcaccacgatcatcacctggagtgagaatgcacgtctggctctttgtgagcaccctcagtggacccctgtggtggtgatgctgggtttgctacagtgtagtgttcagcccgtcctcaaagctcaagtccttcatgttctcgctgcttttggcaaatctcctgagattgcagcctccctctggcagtctctagagtacacacagatcctacaaacagtgaaaatccctggtcagagacaggctgctgggatcgaggtggagctgaatgagattgaatcgagctgtgaggagtatccactcacacgggccttttgtcatctgatcagtactctggtggagagcgcacttccagtcaatcttggagcaggactgcgagctcccggcttccaaccttatcttgacttcctgcgtgactctgtgtttctggccttccccacgcgagcctaccgtcgctcagcagaaaagtgggaggtagctgaagcagtgctagaggtttttcacaaacttctgcgagaatatgagccccagccttcagacttcctgccggagatggtggaacttcaaggagagcaggtgccggcccataagcccccggggcacagcctgatgttccaccttttgaacgactcacccaccctctctctctgcctcaacctactggaggagggcgcccgccagcttgacacatacgctcaattccctggcaagaagcagttagagtctgcagttctgcactgtctgtgtttgctggagctagccctgcagaaggaggtgacgttcatggatctgctgagagaaagtcaaacatcacttcttgtgtctcctttggagcagctcctgcagggcgtcagtgctcagagcagaaaggcagatcacatcaccaacattgctaggtacctgtatcacagcagctccaatcctgatgctgcgttccagagtgcaaagatcctgcgacggatcactcgctacccaaacatccaggccagactggttggagacttcactcatgatcaggcagtgagtgagaggttgatggccggctttgtggagtgtctggacagtgaagaggctcaggaaggagtgaccacaaatgattcagactctgagaaacgggtggccagaattcgtcatgagaccaagatccacatcttgaatcttttgatcacgtccctggagctaacaggccccaatctgggcctgtatctgcttggctatgaagtcaagaagccagtttcctccactaaccttcaagacccaggtgttcttggctgtccgcggagctgcctgcatgcgattctcagtctgcttcagaggggcagtgactctcgctctggacctgggctcattaaacaggctcctcaactagctgaactctgctaccaggtgatttatcagctgtgcgcatgtcctgacacctctggcccaaccatgagatacctcaggaccagtcaggacttcctgttctctcatctgcaacacctacctttcgttttatcagaaaatgagatcgcggctctgtctcagatgtcctggctaatgaaaaccacagcaatcgagctccgagtgacctcactgaaccgccagcgctcacacacacagagactcctgaacctcctcctcgatgaccagccacacacattacacacagcagatggagagaccggcatggaggaggagaacagatcagtcagtggttttctgcagtttggcaccgtctccaaggtgcgcaggaggctgctcagtgttttggatgccatagatttcagtcaggaggcaccagagcttctgcagctggacttctttgagcgcactcagatcgagcaggtcatcactaactgtgaacatgtcaacgagcagggacacaccgtctgcaatgtcaagttgctgcatcgagttttagttgcagagatcaatgcactacagggcatggcagccatcgggcaaagaccactgctaatggaggaggtgaattcagtcctgcagcaggtggtggagaggaatcgcgtgcggcgcagtctcagtgccaagcgtcatgctctgcagagctggaggagtctggtggagaccatcctcaccgcctgtccttcagaactcatccctgcagaccagcggcagctcatcatcagagatctgctgcttgacctgcatgacaaggtgttatcagaagatgctgctggtgaactgatgccaatcgtagccggagcagtcttcacattaacagcacaccttagccaatcagtgctctctgaacagcagggggtggggccagagggtggctctggatcaggatttgcatccattgctaactccgcccttcacctcatcctgaggaagctgctggactttatcttgtgcacaggtggaggctttcagcgtctcagggctcatttgtatggagctctgctgtactacctgcagatcgcccagaaacctgaggagccagagacactgcagacaggcacatccatgtgggagcgtttgactgcccctgaagattgcttctccaagctacagagagaaaacctgtccatcatcgagagctatggcactgcgctaatggaagtggtgtgcagagacgcttgtgatggccatgagatcggccgaatgctggctctggccgtgttagacagggtgttgtctatagacaggcagtgtcagtggctggtgtacttgtgtaacagtggttacctgcgtgtgctggtggagagtttaaagcaggatgacgtttctttgcaaactcttctcacgcctcagccgccgctgcttaaaccgttgtacatctacgagtccaaaatggctctgctgacccgcgtggccaagaccgctcagggtgcgatggagctgctgcgctgtggtctggtcgctcagctggtggagtgtcaggtgtttcacatgctccctcagaatgacgcgctcagagtgtttgggcagagagatccttcagggtttattcctagtcctctggagcgatacaggcagatcctgcttcctacactcagactgatgcaggtcatcttgacctccaccaccgcacagcaccagcagggggcagcacaggtgctccagtggcttatcgttcattcggatgtcattcagtctattctgcatggtcaggacatgagcatgggctctttacaggaactgtctctgctcactgccatcatcagcaagacggcactgccaggagcacttgagatgggacaggaaatcaacagcgctgccctcatggagttacagggacacatcggcagattccagcggcagtcgttgtctctgctggtgcgtctggtgggcactgatcgcgctcgctaccttaagcagattgaggacaccgtttctcccagcaacctagcagaaaaaagagaggaaatggaggttgccatgcaacagatctgtgctaatattatggagtactgccagacgctgctgctgcagagctcatctgaagcccagttctcactctgtctgttcagcccatcagcaagtgaaccagccgatgtgtccatcccctctgcccgcgtgcccagtctggggctggttctgctcctgctgaaaaacagcgccagcgacttcttcaggtatcacgacagtcacagacagagcctgaacaagctggagcgagtggagcagcttcctcctgaggaactcaaagagctgtgccagggtttggtgtctggttctggtggagtggaaaagatctcatcagtgcagagaaacgtactcgccaaacggagactcgtccagctggtcaacaacagagccaagcttcttgccctctgctcttatatcattgagacgtgtctgtttgtcatctggcgccacctagagttttacttgctttactgcactcccactgaccccaaagactcactgctgccaggttacagaggtcagctttctctcaagcttcaggattattttcagatgctgttgaatgacatggtttcttaccagattgctctctctgcagatcctgcaggcagcagaggattgagcgtgtcgagagtgagccagcaagatcttgaacagttgcagagtgacatgtcgagcagcttcagtgagccgctgcagaggaagctgctggaggtggagggactttatagcaaaagccgctctcgtcacaccttcatccaggccctgacacgcaggatccgcggcctcgtacaccacgccaaaagctgaactccggcatgcagattttctctaattgtgagaaaagaaaaatcttttgaattcggtgtctttttttgcagttttgatgactatcaatccacacatgaggttttctgcctatgatagtcgctgtattggctttctgcttttttctaatgtggtcattaaatgcttttctaacagaca

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