LOCUS       XM_009294484            4915 bp    mRNA    linear   VRT 15-JUN-2017
DEFINITION  PREDICTED: Danio rerio testis and ovary specific PAZ domain
            containing 1 (topaz1), mRNA.
ACCESSION   XM_009294484
VERSION     XM_009294484.3
DBLINK      BioProject: PRJNA13922
KEYWORDS    RefSeq.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_007130.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jun 15, 2017 this sequence version replaced XM_009294484.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Danio rerio Annotation Release 106
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4915
                     /organism="Danio rerio"
                     /mol_type="mRNA"
                     /strain="Tuebingen"
                     /db_xref="taxon:7955"
                     /chromosome="19"
     gene            1..4915
                     /gene="topaz1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 5 ESTs, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     1 sample with support for all annotated introns"
                     /db_xref="GeneID:101883830"
                     /db_xref="ZFIN:ZDB-GENE-130117-1"
     CDS             30..4622
                     /gene="topaz1"
                     /codon_start=1
                     /product="testis- and ovary-specific PAZ domain-containing
                     protein 1"
                     /protein_id="XP_009292759.1"
                     /db_xref="GeneID:101883830"
                     /db_xref="ZFIN:ZDB-GENE-130117-1"
                     /translation="

MFPCGTRIKLKRDSFKPENKPEPNKRRWTGSNVKPVCAVNPPVDGGSPKPATADPGTVSSKVSVITGADPEAMPASKNRLSEHKREIFCRLRLALCFARNKPRNGGKRVIVGPTDAHALSVINSVESGNVNVSVEPPELIPPARQSVKHGAQNTLSRPTVPRREKGTQRRLFAGEAKTAIRTEARRSRASLTGRTSANFSSKVELRRLRSEERSRKRSVKNACCALCGDVKYNPPPPPSSKNLVRLLNPRPRAGRPSLSAEKQRTPSASRHASALEKNPTVKLCDVGRVFRIASRDFSCVLPAVLKQTASRRAQQQCLQTEFGVLTHPHPHSIRKRRRSRKLSTATKHSCASLSSGDAPCGGAHISEGSLEESDACLVEDPETMRLSESPDTVAPACANNCPEKQKHCPVNHISGNTSSPERRVPPLVLRRVSVNGFGFRSEDDDRESGPDEDGRNQDSDAESANAPESFSCQRTQAYIFIPKSSCARTCKPWPFPRTGPPEELRSPRNGARWIITATFTNTAQDDEEKNERSEAAEEVYSRKSHADTPCRLISGDIPDVLNQQSSVLCENTSTCVLKRTSGFSVTAISEHAELNQSQEHSTEQVNSCKLDGCGFEASLEANGLLRHHSLLDHEDHPDAPGVWEPADHLVGDSKCAKFSILPISQFEDQSRKADEGAVYNPALLSQMCIKVGVLKAQDSSSVDQTEGESAAHSHSSNPEGEVKPASDGQTHTDMSSEEENQDAGGVSAPSSSSSDDDDDDDGVCSMNTNNNNNTQACSQSHRVEESFLDVSRAYEEDVLVLDVIQDDPELFGTVVSEAKTQQDAPTKNQDTLTKMEDQHCEVIWEQHTEGTSKVAEDVQTDHLSDSGSKVNEMQVCRSQPVQSLNTVKSENAGIDCNNNQPSRDSSNLNSISVISSRAPRPVTDSCFSGREVTAKEPPALRTPHISYCRFYFSDHSTCLRSGVCRFLHVPRDGDETFCMEMVKKFCHAGKVVLILRAVEVFMGYYSRCPPSGSFSQETVNSLLSILLNMGLLREFLAVLNLLLTHKKLPPPELVLAVFKFASDRRLINFVPELILLTSKIVESGCVFTVDQCEVMQSHLHLMQVPRQQMDIFMAVKCRALATNPHTSELSHLTQAVVRVEMLKQQEDWSGLALVFYSVCSGSHSNNELLRFCCCVTMALLKEPKDKHTVPYELFADAVCQREPSDEVKSILGRIGVSLIFRYHRTREWSKGVKLVNVMLRLQIEFIMQKGLMGNEHRVSRCQLVSMAAELFLHSGSIEGALKLLRADGWFVSSSVWPCEAADVEIRKRVLTLLAGKTSHRDAFEILTNLPGLRQPINGVQISDYTDMFNAHLRVCLLKQTLPVAADILEFMLTRSLVPETQQLQNLIHRLGKQNMWSRARALFRRARSAGFYSSVVCEADALFLPCGLSEIEMTLAFEMFITFINSSLSAHTHPLLITLRRQAGVENVTESVYLAAGCRLLSAALIPNPKLSIRYTAVNQQQEQLFTLDRASAHKWILQNSCWALEVWAS"

     misc_feature    3444..3965
                     /gene="topaz1"
                     /note="Putative aspartate racemase; Region:
                     Asp_Glu_race_2; pfam14669"
                     /db_xref="CDD:434113"
ORIGIN      

cggttttatcgttcgcgcatgcgtcagagatgttcccgtgtggcacgaggatcaaactgaagcgggactcgtttaaaccggagaataaaccggagccgaataaacggcgatggaccggatctaacgttaaacccgtgtgtgctgtgaatccacctgtggacggcggctctccgaaaccggcaacagctgatccaggtacagtctcctccaaagtgagtgttattaccggagcagatcccgaggctatgccggcctccaaaaaccggttatccgaacataaacgcgaaatcttctgccggttgcgtttagcgttgtgcttcgccagaaacaaaccgcgaaatggcgggaagcgcgtgattgtcggcccaacggacgcgcatgcgctctccgttataaacagcgtcgagtctggtaacgttaatgtttccgtcgaaccgccagaactcattccgcccgcgcgacaatcggtaaaacacggcgctcagaacacactctcgcggccgaccgtgcctcggcgggaaaagggaacacagaggagactgtttgccggtgaggcgaagaccgccatcaggacggaagcgcgcagaagtcgcgcgagtttaaccggaaggacaagtgcaaatttcagttcaaaagttgagctgagacggcttaggtcagaggaaaggtcgaggaagcgctcggtgaaaaacgcgtgctgtgctttgtgtggtgatgtaaaatacaatcctcctcctcctccctctagtaagaatctggtccgtttactcaatcccagacccagagctggccgccccagcctgagcgcagaaaagcagagaactccctcagcgtcccgtcacgcctcagcactcgagaaaaaccccacggtgaagctctgcgatgtcggccgagtgtttcgcatagcctcacgtgatttctcctgtgtcctgccagcggtgctaaaacaaacggcgagcaggagagcgcagcagcagtgcttgcagacagagttcggtgttctcacgcatcctcatccgcacagcatcaggaaacgtagacgctccaggaaactttccaccgcaaccaaacatagctgtgcttctctctcatcaggtgatgctccgtgtggcggcgcgcacatctctgaaggatcgctcgaggaatcggacgcttgtctggtagaggatccggagacgatgagactgtcggagagtccagatactgtcgctccagcatgtgctaataactgtccagagaaacagaaacactgtccagtgaaccacatatctggaaacacatccagccctgagcgccgtgtgccacctctagtgctcagaagagtgtcggtcaacggcttcggcttcagaagtgaagatgatgaccgtgagagcggtcctgatgaggatggcagaaaccaggattcagatgcagagtctgcgaatgcaccagagagtttctcctgccagcgaacgcaagcatacattttcattcccaaatcatcatgcgctcgcacttgcaaaccgtggccctttcctagaacgggtcctcctgaggagctcagatcacccagaaatggagctcgctggataatcaccgccacattcacaaacacagctcaggatgatgaagagaaaaacgagcgttctgaagcagcggaggaggtttactctcggaaaagtcatgcagacactccatgtagattaataagtggagatattcctgatgtgctgaatcagcagagctcggtgttgtgtgaaaatacgtccacttgtgtgctaaaaaggacttcaggattctctgtgactgctatttcagaacatgcagagctaaaccagagtcaggaacacagcactgaacaggtcaacagctgcaaactcgacggctgtggctttgaggcgtcattagaagcaaacggtcttcttagacatcattccctgcttgatcatgaagatcaccctgatgctcctggcgtttgggaaccagctgatcatttggttggagattccaaatgtgctaaattcagcatcctccctatttcacagtttgaggatcagagcagaaaagctgatgaaggagcggtttataacccagcattgctctcgcagatgtgtattaaagtgggagtgctgaaagctcaggacagctcatcagtggatcagactgaaggagaatctgccgctcattcacacagcagtaatcctgaaggagaagtgaagccagcgtctgacggacaaacacacacagacatgtcctctgaggaggaaaaccaagatgctggaggtgtttctgcaccatcttcatcttcatctgatgatgatgatgatgatgatggggtgtgttcgatgaatactaataataataataatacacaagcttgttctcagtctcatagagttgaagagagctttctggatgtttctcgagcgtatgaagaagacgtcctggtgctggatgtgattcaggatgatccagagctgttcgggactgtggtttctgaagccaagactcaacaggacgcaccaaccaagaatcaagacactctgacaaaaatggaggatcaacactgtgaggtcatctgggagcaacacactgagggcaccagcaaagtggctgaagatgtccagacggatcatctgagtgacagtggttcaaaagtaaatgagatgcaggtttgcagatctcagcctgtccagagtctgaacactgtaaagtctgagaatgctggaatagactgtaacaacaaccagccgagcagagactccagcaatctgaacagtatttcagtaataagcagcagagcgccgagacccgtgacggactcctgcttcagcggtcgtgaagtgacggctaaagagccgcctgctctgagaactccacacatcagttattgtaggttctacttcagcgatcacagcacctgcctgcggagtggtgtgtgtaggttcctgcatgtgccgagagatggagatgagacgttctgtatggaaatggtgaagaagttctgtcatgctggaaaagtggttcttattctgcgggcagtggaggtgtttatgggatattacagtcgctgtccccccagtgggagcttcagccaggagacggtcaactctctgctctccattctcctcaatatgggtttactgagagaatttttagccgtcctgaacctgctgctcacacacaagaagctgcctcctccagagctggtgttggctgtgtttaagtttgcgagtgaccgaagactgatcaactttgtgccagagctcattctgctcacctccaagatcgtggagtcgggctgtgtgttcactgtggatcagtgtgaggtcatgcagagtcaccttcacctcatgcaggtccccagacagcagatggacatcttcatggctgttaaatgcagagcactggcgacgaaccctcacacctctgagctttcacatctgacgcaggctgttgttagagttgagatgctgaagcagcaggaggactggtctgggctggcgctggtcttctacagtgtgtgttcaggttcacacagtaataatgagctgctgcgcttctgctgctgcgtcaccatggctctgctcaaggagcccaaagacaaacacactgttccctacgagctgttcgctgacgcagtttgtcagcgagagccgtctgatgaggtgaagagcattctgggccggattggagtgtctctgatcttcaggtaccacaggacccgagagtggagtaagggggtgaagctggtgaatgtgatgctccggctgcagattgagttcatcatgcagaaggggctgatgggtaatgagcaccgtgtgtctcgctgtcagctggtcagtatggctgcagaactcttcctgcacagcggcagcatcgagggcgcgctcaaactgctcagagctgacggctggtttgtgagctccagtgtgtggccctgtgaagcggctgatgtagaaatcaggaagcgagttctgactcttttagctggtaaaacctcccaccgagacgccttcgagatcctgaccaacctccccggactcagacaacccatcaacggcgttcagatctcggactacacagacatgttcaacgctcacctgcgtgtgtgtctgctgaagcagacgctgccggtggctgcagacatcctggagtttatgctcacacggagtctggtgccggaaacacagcagctgcagaacctgatccacagactgggcaaacagaacatgtggagccgcgccagagccctgttcagacgcgctcgctccgcaggtttctactctagtgtggtgtgtgaagcggacgctctgttcctgccctgcggcctcagtgagatcgagatgactctggccttcgagatgttcatcaccttcatcaacagcagcctgagcgcacacacacaccctctgctcatcacactgagacggcaggcgggggtggagaacgtgacggagagtgtgtatttggctgccggctgtcgacttctgtctgccgctctgattccgaaccccaaactgagcatccgctacaccgcagtcaaccagcagcaggagcagctcttcacactggacagagcctccgcacacaagtggatcctgcagaacagctgctgggcactggaggtctgggcaagctaacacacacacacacacagagagatgcatacatatatacatgcgcacagatacagatgcacatgcactcacaacacaggaatacactcatgcacaaacctatgcacatatgcatactcacactcgcatgcatactgacttatacacaaacatacacacacacacatgcatacatgcacacaacacatgaatgcatgtttacttatgcacatgcatactcacaaatacacatgcatgctagcttatgcacaaacatacacacattcacacccacacatgcatactcatacacacac

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