LOCUS       XM_001332799            5785 bp    mRNA    linear   VRT 15-JUN-2017
DEFINITION  PREDICTED: Danio rerio si:dkey-46g23.1 (si:dkey-46g23.1),
            transcript variant X2, mRNA.
ACCESSION   XM_001332799
VERSION     XM_001332799.8
DBLINK      BioProject: PRJNA13922
KEYWORDS    RefSeq.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_007114.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jun 15, 2017 this sequence version replaced XM_001332799.7.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Danio rerio Annotation Release 106
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5785
                     /organism="Danio rerio"
                     /mol_type="mRNA"
                     /strain="Tuebingen"
                     /db_xref="taxon:7955"
                     /chromosome="3"
     gene            1..5785
                     /gene="si:dkey-46g23.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 6 ESTs, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 48 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:793145"
                     /db_xref="ZFIN:ZDB-GENE-070705-475"
     CDS             99..4430
                     /gene="si:dkey-46g23.1"
                     /codon_start=1
                     /product="trinucleotide repeat-containing gene 6B
                     protein-like isoform X2"
                     /protein_id="XP_001332835.5"
                     /db_xref="GeneID:793145"
                     /db_xref="ZFIN:ZDB-GENE-070705-475"
                     /translation="

MEDSQCKTGDSGHQEGAEDSTRESASPCPVFGGWSEAPEGGKDANWSAVADGQPPSTVPPRYMPREVPPRFRNQQEPKVLLKRGQPPLSCMLLGGASGGDASPRLPLQEHSDASDSTVDSVSLHSSSDASATPTYANYTWGRGSGGQASSQGMDKDSSDVEKWPRPEDSWNSDQTLHSARLGMDESADLQMDSSSKLSEHAEDSASSQSENKESIKGVIQNFSSKVSPLSGDQEDTQGLNPNYTPVGDLSTNTASEESSPTPLSPAHPLYQTLLKREEPVTGDWAKPGPNGGAASSMDLWGTIENPAVKSNGGSSGDGTSQGVWDGDAVGSYKQAATGQTSDFAVGKSKEDMSEEVSAESLHKSPVFGNNVASGDDNQKVADACDGSKGKSASSEDAQNLVQSPSKCHPEEALQSMINHTNLDPKVLCNTGWGKTQIKQNVAWDFEADVGNVGWDAEVNTERSKEGWQEAGDLSNSKMQKQEVGHMGRAQGWTERGEMSIGTGHKAGGWGEDQEGASRREGTGWSQGGGKEWTPVPEAGGWKEEKGTNQNEGLWGSPEDSGPRSGGWDCKTHQGWGEKLLPSQIPNKQAALKTQNQQPQQQSQTQQQMPGYPKVVQDRGRTGENDEQSKGSGWSCGPIPQIASAGEPSGWDEPSPQSISRKMDIDDGTSAWGDPSRYSSKNVNLWDKNSSQPQQQSSGRPAGTPSKNSGPAIWTRSSGPSDSSMESGPAPWVKPFDGSSGWGESSEPGKGGWGNSHSHPNKTGSKSMQEGWGDEGSNSSRHSSWEEEDGGVWGGRGSQSNMSSSYSSGGWGQSQGSRRLSSKSPLKGNSGDSWVSPVSRQFSNMGVTDDDSSMGHDNRHDRRGMSDGEMRRGGRTGGAFRSQTAKETGCGESGPYLDKVGGHGMFGGGIPPMRGMHQAGVHPLNPSPGIRAQVPHQFLPPQVPGPMLKPMAPPSGGMFPPQLSPQHIAMLGGINPHMQQFQLACQLLLQQQQQQQQQFLNQRKFSPPLRQQHDPQQLARIMAILQQQQQQQGVVGPKLSPSPLGAHIPKHPDTHLHHLGLNTHKPPEAAVHAAIGVSELHNKAPAAYTGAVKLPDGSSFSQYDVLGSGWHRSAAGKVDAPPANPSWPPEFQPGVPWKGLPSHESDPDPYMTPAGMLGSSLLSDTEHHLLQDNTAKYTELKSSWPPEPIGHSKSWRTNRNASQMPRPPPGLSSQKQPWVEEGPRMARAWGGGASGTDTPFKSEWSDGGASAGKSWLLLRNLTPQIDGSTLRTICLQHGPLLTFHLGLTQGSALIRYCSPHEAAKAQSALHMCVLGNTTILAEFMSEEDVIRYFTHSQAAGVAGSPEVSPGSDSREGERAPGVPDGDAPVGWQGLDGAPGSTVEVPGLAILSQWSNNAGEGAGKGVWGGVAPGYHGSSLWGAPQLEDGTAGLLPGNLLGGGTDSL"

     misc_feature    2190..>2477
                     /gene="si:dkey-46g23.1"
                     /note="Argonaute hook; Region: Ago_hook; pfam10427"
                     /db_xref="CDD:431279"
     misc_feature    <3381..3845
                     /gene="si:dkey-46g23.1"
                     /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg;
                     pfam16608"
                     /db_xref="CDD:435458"
     misc_feature    3855..4100
                     /gene="si:dkey-46g23.1"
                     /note="RNA recognition motif (RRM) superfamily; Region:
                     RRM_SF; cl17169"
                     /db_xref="CDD:450164"
ORIGIN      

gtgagagggacgagacacgagagggacccggatgttgatcagcgcgtcgttagtgcgcagctgcaggccggactgactgaggaagggagcagcagttcatggaagacagtcaatgtaagacaggagacagcggtcatcaggagggcgctgaagacagcacaagagaatcagcctccccctgtcctgttttcgggggttggtcggaggcccctgagggagggaaggatgccaattggagcgctgtggccgacggacagcccccctccacggtgccgccgcgatacatgccccgtgaggtgccgccgcgcttccgcaaccagcaggaacccaaagtgctactgaaaaggggccagccgccactgtcctgcatgctgctgggaggcgcaagtggaggggacgcctcgccccgacttcccctgcaggagcactctgacgcctcagattctacggtagattcagtttctctgcactcatcatctgacgcctccgccactcccacttatgcaaattacacatgggggcggggctcaggaggtcaagcctcgtctcagggaatggacaaggacagttctgatgtagagaaatggccaagaccagaagactcatggaatagtgaccagaccctacattctgccaggttggggatggatgagtccgctgacctgcaaatggacagttcttctaaactctctgaacatgccgaagacagtgcatcttcacagtctgagaataaagaaagcattaaaggagtgattcagaactttagctccaaggtctctccgctttctggagatcaggaggacactcaaggtctaaacccaaattatacccctgttggagatctctcaaccaacactgcctctgaggagtcttctcccacacccttgagtccagcccatccactctaccagacactcctcaaaagagaagagcctgttacaggagattgggcaaagcctggaccaaatggtggtgcagcttccagcatggatttgtggggtaccatagagaatcctgctgtgaagagcaatggtggaagtagtggagatggcacctctcagggagtgtgggatggagatgcggtaggttcatacaaacaggcagctacaggacagacctcagactttgcagttggtaaatcaaaagaggatatgagcgaggaggtaagcgcagaaagtttacacaaatctccagtgtttggaaacaatgtggcttcaggagacgacaatcagaaagtagctgatgcttgcgatgggtccaagggtaaatcggctagcagtgaggatgctcaaaatctggtccaaagcccctccaaatgtcacccagaagaagccttacagagcatgatcaatcacactaacctggatcccaaagtgctgtgcaacaccggatggggcaagactcagatcaagcagaacgttgcgtgggattttgaggcagatgtgggcaatgttggctgggatgcggaggtgaacaccgaacgcagtaaggaaggctggcaggaagcgggtgatctttccaactctaaaatgcagaagcaggaggttgggcacatgggtagggctcaagggtggaccgagcgtggagaaatgagcatcgggactggtcacaaagcgggtggctggggggaagaccaagaaggtgcatctaggagggaaggaacaggttggagccaaggtggcggaaaagagtggaccccagtgcctgaagctggaggctggaaggaagagaaaggcacgaatcagaatgaaggattgtggggcagccctgaagattcgggaccgcggagtggtggctgggattgtaaaacccaccagggatggggcgagaaacttcttccatcacagataccaaacaaacaagcagcacttaaaacccaaaatcaacaaccgcagcagcaatcgcaaacccagcagcagatgccgggatatccaaaagtcgtacaggaccgtggtcgtacaggagagaacgatgagcagagtaaaggctcggggtggagctgtgggcccatccctcagattgcttcagctggtgagccgagcgggtgggatgagccctcgcctcagtccatcagtcggaagatggacattgacgacggcacctctgcatggggggatccgtcacgatacagcagcaagaacgtcaatctgtgggataagaacagctcgcagccccaacagcagtcctctggaagaccggctggaactccatctaaaaactctggtcctgcaatatggacacgcagcagtggcccctccgactcgtccatggaaagcggtcctgctccctgggttaaaccattcgatgggtcatctggctggggggaatccagtgaacctgggaaaggcggatggggaaactcgcattcccatcctaataagactggttctaagtctatgcaagagggctggggtgacgaaggctcgaattcctcccgacactccagctgggaggaggaggatggaggagtctggggcggtcgggggtcccagagcaacatgtccagctcatacagctccggcggctggggccaaagccaggggtccaggaggctcagctctaagagccctcttaaaggtaacagtggagactcgtgggtttctcctgtatctcggcagttctcaaacatgggcgttacggatgacgactccagcatgggtcacgataatagacatgacaggagaggcatgagtgatggagagatgcggagaggaggcaggactggaggagctttccgctcgcagactgccaaagagacgggctgtggagagagtggaccctacctggacaaggttggaggtcatggtatgtttggcggtgggattcctccaatgagggggatgcatcaggccggtgtgcacccattaaacccctcccctggcatacgagcacaagtgcctcatcagttcctgcctcctcaggttccagggccgatgctgaagccaatggcgccccctagcggaggcatgtttcctcctcagctgtcccctcagcacatcgccatgctcggcggcattaatccacacatgcagcagttccagctggcctgtcagctcctcctgcaacaacaacaacaacagcagcagcagtttctgaatcagaggaagttttctcctcctctaagacaacagcacgacccgcagcagttggcgcggatcatggcgatcctccagcagcagcagcagcagcagggtgttgtgggacccaagctctctccgtctcctttgggtgcacacatccccaaacaccccgacacacacctgcatcacctgggcctgaacacacacaaaccccccgaagcagcagtgcacgcagccatcggagtatcagaactacacaacaaagcccctgctgcgtacactggagcagttaagctgcccgatggctcctcgttctctcagtatgatgtgttgggcagcggttggcaccgcagtgcagcagggaaggtggacgcgcctcctgcaaaccccagctggcctccagagtttcagccgggcgtcccgtggaaaggcctcccgagccatgaatctgaccctgacccctacatgacccctgcgggaatgctgggatcctccctgctcagcgacactgaacatcacctgctgcaggacaacacggctaaatacacggagctgaagtccagttggccgccggagcccattggacacagcaaatcatggcggaccaatcgcaacgcttctcagatgccccgcccccctccgggcctgagctctcagaagcagccgtgggtggaggaggggcctcgcatggccagggcatggggaggcggagccagcggcacggacacgccctttaaatcagagtggagtgatggaggagcgtcagccgggaaatcatggctgctgctcagaaacctcacaccacagatcgacggctcgaccctgaggacgatctgtcttcagcatggccctctgttgacctttcacctcggcctgacccagggcagcgctctgattcgctactgcagcccgcatgaggccgcaaaagcccagagcgccctgcacatgtgcgttctgggaaacaccaccatcctggccgagttcatgagcgaggaggacgtcatccgctacttcacacattcccaggccgcaggggtggcggggtcaccggaggtttcccccggatccgactccagagagggcgagcgggcgccaggcgtaccagatggagacgcgcctgtgggatggcaagggctggatggagcgcccggatcaacagtggaagtgccaggactcgccatcctcagccaatggagcaacaacgccggcgagggggcggggaaaggagtctgggggggcgtggctcccggataccacggcagcagtctatggggtgcccctcagttagaggatggcacggctggcttgttgccgggcaacctgctcgggggcgggacagacagtttgtgattggcagctgtcaatcatggagtgagtggtacgcagattttcaagtgtgtcaaagcggtgtcagactgcaaaaataatgatctttcccaacatctggaagcccaatgtgaacacgagagacggccagcctaggaaacatttcagtttcagatagaagctctgcaaaaatgattaagcctttaggagttctgccttgtgactttatttattaagacttgtctaacccacagtactgtggagtattagtgtagactcactgttttatttacatttcattttaactatacacacacacacacacacacacacacacacacacacacacacacacacacacgtgcacagactttaactaacattgtgttttgttttgaattgtcctggaaataatgtcacaaggcagaagacgtgtgtataaatgacatatctctatgtaaatctagacttcttaataaggtgtatgtagttctgagtgacagttaccaaaaacaagcacgcgtggcttctgtgtgtgtcctcattatttttgcagttgcttctgttgacacactgcagctttaagacactcacattcagagagctacatttccacacaaacactggacgtttcgacaggcttttatatccagtcagatattaaacacacacacacacacacacacagatgcagtgtgagcgccgcaggcattcgcttacagacattctgatcattgccagagttaagctatcatgtatttgaatgcagggactgttcctaaaggccttctttcactctcacacacacacacacacacacacacacactctcgcactgctcaacttgaacaactgatgtaaagctgatgttaggctggcacatgcagacactgtttgatgcttcgactgatttaattcaagtgcaagagcatctgaaacctgtagatgagggaggatctcttaaaaacacacacagggcacgcgtttcactcctgaatcactaatctgcactaccaaagcagttttaggactaattttaatattgttttaatgataactcgcacgtgaaatgtgattcttaaagggacagttcacccaaaaataaaatgtgatcagtatttacatgcacacaaactgattatacaggcaagccggaaattattcatacttctggctaatcctgactactttaatccaactagtaagtgtttttatggcttgtaaatgacaccggtttatcctaaaagataataaggtgatgtacaagaggcttcattgtgaaaacatatatatatttctcagcttttgtttacatttgaatcaaaactttaagtcagaatttgccttggcgtataaataatctcaggtttgactgtata

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