LOCUS       NM_200177               1950 bp    mRNA    linear   VRT 29-SEP-2021
DEFINITION  Danio rerio sarcolemma associated protein b (slmapb), mRNA.
ACCESSION   NM_200177
VERSION     NM_200177.1
KEYWORDS    RefSeq.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
REFERENCE   1  (bases 1 to 1950)
  AUTHORS   Bayes A, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A,
            Choudhary JS, Emes RD and Grant SG.
  TITLE     Evolution of complexity in the zebrafish synapse proteome
  JOURNAL   Nat Commun 8, 14613 (2017)
   PUBMED   28252024
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1950)
  AUTHORS   Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I,
            Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y and
            Bobe J.
  TITLE     Gene evolution and gene expression after whole genome duplication
            in fish: the PhyloFish database
  JOURNAL   BMC Genomics 17, 368 (2016)
   PUBMED   27189481
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1950)
  AUTHORS   Ling XP, Lu YH and Huang HQ.
  TITLE     Differential protein profile in zebrafish (Danio rerio) brain under
            the joint exposure of methyl parathion and cadmium
  JOURNAL   Environ Sci Pollut Res Int 19 (9), 3925-3941 (2012)
   PUBMED   22767353
REFERENCE   4  (bases 1 to 1950)
  AUTHORS   Shkumatava A, Stark A, Sive H and Bartel DP.
  TITLE     Coherent but overlapping expression of microRNAs and their targets
            during vertebrate development
  JOURNAL   Genes Dev 23 (4), 466-481 (2009)
   PUBMED   19240133
REFERENCE   5  (bases 1 to 1950)
  AUTHORS   McDermott BM Jr, Baucom JM and Hudspeth AJ.
  TITLE     Analysis and functional evaluation of the hair-cell transcriptome
  JOURNAL   Proc Natl Acad Sci U S A 104 (28), 11820-11825 (2007)
   PUBMED   17606911
REFERENCE   6  (bases 1 to 1950)
  AUTHORS   Link V, Shevchenko A and Heisenberg CP.
  TITLE     Proteomics of early zebrafish embryos
  JOURNAL   BMC Dev Biol 6, 1 (2006)
   PUBMED   16412219
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC045462.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC045462.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA2168446, SAMEA2168447
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1950
                     /organism="Danio rerio"
                     /mol_type="mRNA"
                     /strain="AB"
                     /db_xref="taxon:7955"
                     /chromosome="23"
                     /map="23"
     gene            1..1950
                     /gene="slmapb"
                     /gene_synonym="slmap; zgc:55817"
                     /note="sarcolemma associated protein b"
                     /db_xref="GeneID:393146"
                     /db_xref="ZFIN:ZDB-GENE-040426-809"
     misc_feature    25..27
                     /gene="slmapb"
                     /gene_synonym="slmap; zgc:55817"
                     /note="upstream in-frame stop codon"
     CDS             55..1185
                     /gene="slmapb"
                     /gene_synonym="slmap; zgc:55817"
                     /codon_start=1
                     /product="sarcolemma associated protein b"
                     /protein_id="NP_956471.1"
                     /db_xref="GeneID:393146"
                     /db_xref="ZFIN:ZDB-GENE-040426-809"
                     /translation="

MEEQKLKDPINKVSLIKDELSRSTVEASESEKVIQRLNQELQEANEQANSSKHKCVELQGLLEEEKRANKQQAEESAKQMKVLQTQLQKLQEEMENLRDQKDSAVFSMRQETHAAQEEVQVLRRTMEKTAAEREHEVSALKGNLATLTSELEKWQQAANKYERELESVQASHQQQNQQRDRATKQQAGELEKVQKDCESLRRDCASLRSEREQLADKQQKEKASLQNENSSLRSEKEQLQKKQQQLEKELDSSKRQNTSLSNTVKSLEKTQADLEKRLSVLQEEHQRDNGQLEQSNSRIKELQKEYEEMQAELSGLRGKFENAEEEKRSVSLELQQSQERLRLMQDKDNHGKWIRWMPVAAVTVAVTGYLLSKSSK"

     misc_feature    250..>1104
                     /gene="slmapb"
                     /gene_synonym="slmap; zgc:55817"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; Region: SMC_prok_B; TIGR02168"
                     /db_xref="CDD:274008"
ORIGIN      

aaaaattttcggctccgactgttgtgacatcacgagtcttcagtgggggaaacaatggaggaacaaaagctgaaagatcctattaataaagtgtccctaatcaaagatgagctgagcaggagcactgtggaggccagtgagtctgagaaggtcatccagcggctgaaccaggaactgcaggaggccaatgaacaggccaactccagcaaacacaaatgtgtcgaacttcaaggtctactggaggaggagaaaagagccaataagcagcaggcagaggagtcagcaaaacagatgaaggtcttacagactcagctccagaagctccaggaagagatggaaaacctcagggatcagaaggacagcgcagtcttcagcatgagacaggaaacccacgcggctcaggaggaagtgcaggtgctgcgtcgcactatggagaaaacggcagcagagcgagagcatgaggtcagtgcgctgaaggggaatcttgcaacgctcacttcagagctggaaaaatggcagcaggcagcaaacaagtacgagcgcgagcttgaaagtgtacaggcaagtcaccagcagcagaaccagcagagggacagagccaccaaacaacaagcgggcgagctggagaaggtgcagaaggactgtgagagcctgaggagggactgtgcatctctgaggtcagagagagagcagctggctgataaacagcagaaagagaaggccagtctgcagaatgagaacagcagcctgcgctcagagaaagaacagctacagaagaaacaacagcagctggagaaagagctggacagctccaagagacagaacaccagcctgagcaacacggtcaagagcctggaaaagacgcaggccgacctggagaagcgtctgagtgtcctgcaggaggagcaccagagagacaacgggcagctggagcagagcaacagcaggatcaaagaactgcagaaagagtatgaggagatgcaggcagagctgtcgggcctgagggggaagtttgagaatgcagaggaggagaaacgctccgtcagtctggagctgcagcagagccaagagcgcctcaggcttatgcaggacaaagacaaccatggaaaatggatcagatggatgcctgtcgccgctgtaactgttgctgtgacgggatatttgctttcaaagtcctcaaaatgaagcacgtgatgaaccagtaacaagcacacgcacctgacatgtacacctagcaaacctttctcagatgtcttgactttttttgtccttttagtccgcgggatgttagtttgagtaatgagtatttaaaagcaacttcttactcaaatgttaaagggagtaataacgtgagaacatttcccatcttttttttttaaattagatgtactgtttgcatagcatttgaagtatctggctaataacaggtattttattgagcactgttgcttttgccaaacaaacatttagtaaattgccttaaccttagataagcaaaagtttatacctcgcctgaatgagagctgactgagcatcgcagcgcccactgcaataacacatttcagacattgatggatccgtttatgttttaactcactcatattttctgtggcctgaaggcctgttttgccatgtaacctgtttgtgtctttgcaccttatacgaagccattagtgattagtctatgcactgtactttattgttataagggtttgatgtgttaaggataatgatgttgatgatgataataaatattgtacacttaggagattagagtgctaatgttccctaaagagagctgttatagagtgtttatgatttatgtttattacttgtacagagatttaatgaactacctgatctaacaagcgtgctatctgcaataaatgagcaaaagggaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa

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