LOCUS       NM_001386236            1170 bp    mRNA    linear   VRT 15-AUG-2020
DEFINITION  Danio rerio ADP-ribosylation factor-like 10 (arl10), mRNA.
ACCESSION   NM_001386236 XM_684052
VERSION     NM_001386236.1
KEYWORDS    RefSeq.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from BX936439.10.
            
            On Aug 15, 2020 this sequence version replaced XM_684052.7.
            
            ##Evidence-Data-START##
            Transcript exon combination :: GDQH01016736.1, GFIL01001512.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA2168446, SAMEA2168447
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-455               BX936439.10        3902-4356
            456-630             BX936439.10        7320-7494
            631-806             BX936439.10        14779-14954
            807-1170            BX936439.10        20724-21087
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Danio rerio"
                     /mol_type="mRNA"
                     /strain="Tuebingen"
                     /db_xref="taxon:7955"
                     /chromosome="21"
                     /map="21"
     gene            1..1170
                     /gene="arl10"
                     /gene_synonym="si:ch211-153m12.1"
                     /note="ADP-ribosylation factor-like 10"
                     /db_xref="GeneID:560654"
                     /db_xref="ZFIN:ZDB-GENE-091204-51"
     exon            1..455
                     /gene="arl10"
                     /gene_synonym="si:ch211-153m12.1"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    144..146
                     /gene="arl10"
                     /gene_synonym="si:ch211-153m12.1"
                     /note="upstream in-frame stop codon"
     CDS             162..974
                     /gene="arl10"
                     /gene_synonym="si:ch211-153m12.1"
                     /codon_start=1
                     /product="ADP-ribosylation factor-like 10"
                     /protein_id="NP_001373165.1"
                     /db_xref="GeneID:560654"
                     /db_xref="ZFIN:ZDB-GENE-091204-51"
                     /translation="

MLSPPFVCHPLEGNRARVFQNKPGRITCTGQQKQQLSVCRARAAPALAPGALMVVLRHFSVAFSAAMAAVGTALFIALNLFYKRRVWTPESEYFTFREEEEERSEKQVLVLGLDGAGKSSVLQGLSGAGYRRGCRPTRGFNFISLNTPACQLDFLEIGGGEDLRMYWADYLRRTNILVYVVDSSDRSRLPQAKDELHRLLKAETDLPVVVLGNKQDKPDAVSVPELREALSLSSVADQRKLFLLAAQSGSDGLSRTCSLQKIQDLLLKLV"

     misc_feature    480..971
                     /gene="arl10"
                     /gene_synonym="si:ch211-153m12.1"
                     /note="P-loop containing Nucleoside Triphosphate
                     Hydrolases; Region: P-loop_NTPase; cl38936"
                     /db_xref="CDD:453896"
     misc_feature    495..518
                     /gene="arl10"
                     /gene_synonym="si:ch211-153m12.1"
                     /note="G1 box; other site"
                     /db_xref="CDD:206648"
     misc_feature    order(501..521,636..638,798..803,807..809,900..908)
                     /gene="arl10"
                     /gene_synonym="si:ch211-153m12.1"
                     /note="GTP/Mg2+ binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:206648"
     misc_feature    570..572
                     /gene="arl10"
                     /gene_synonym="si:ch211-153m12.1"
                     /note="G2 box; other site"
                     /db_xref="CDD:206648"
     misc_feature    582..590
                     /gene="arl10"
                     /gene_synonym="si:ch211-153m12.1"
                     /note="Switch I region; other site"
                     /db_xref="CDD:206648"
     misc_feature    627..638
                     /gene="arl10"
                     /gene_synonym="si:ch211-153m12.1"
                     /note="G3 box; other site"
                     /db_xref="CDD:206648"
     misc_feature    order(633..638,684..689)
                     /gene="arl10"
                     /gene_synonym="si:ch211-153m12.1"
                     /note="Switch II region; other site"
                     /db_xref="CDD:206648"
     misc_feature    798..809
                     /gene="arl10"
                     /gene_synonym="si:ch211-153m12.1"
                     /note="G4 box; other site"
                     /db_xref="CDD:206648"
     misc_feature    900..908
                     /gene="arl10"
                     /gene_synonym="si:ch211-153m12.1"
                     /note="G5 box; other site"
                     /db_xref="CDD:206648"
     exon            456..630
                     /gene="arl10"
                     /gene_synonym="si:ch211-153m12.1"
                     /inference="alignment:Splign:2.1.0"
     exon            631..806
                     /gene="arl10"
                     /gene_synonym="si:ch211-153m12.1"
                     /inference="alignment:Splign:2.1.0"
     exon            807..1170
                     /gene="arl10"
                     /gene_synonym="si:ch211-153m12.1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

ctctctctcaaaatttgtttatgaaccaaaaatgtctcttagtagcctatacatcttagtttttagtgcttggcattcaaaatcaaataggctacaatttatcgccagtaaagttcaagtagtgcattttatgaacacaacactaatctgagggtttcacgatgctttctccgcccttcgtctgtcacccgctggagggaaaccgggcgcgtgtttttcaaaacaagccagggcggatcacgtgcacgggccagcaaaagcagcagctctctgtctgtcgcgcgcgcgcggctccggcactcgctccaggtgcgctcatggttgtcctgcgtcatttctccgtggcgttcagcgccgcgatggctgcggtcgggacagcgctgtttatcgcgctcaatctcttctataagagacgggtttggacaccggagtcagagtacttcacgttccgagaggaggaagaggagcgcagtgagaagcaggtgcttgttcttggcttggacggcgctggtaaaagcagtgttttgcagggtttgagtggagcgggctacaggaggggctgccgacccactcgcggattcaacttcatcagcctaaacacacctgcgtgccagctggacttcctggaaattggaggtggtgaagacttgcggatgtactgggcagattacctaaggagaacaaacatcttggtgtatgtggtggactcctctgatcgaagtcggcttcctcaggccaaagatgagctccaccgattgctcaaagcagagactgatcttccagttgtggtcctgggaaacaaacaggataagcctgatgctgtcagtgtcccggagctgcgtgaggctctttccttgagctcagtggctgatcagaggaagctcttcctactggctgctcagtcgggatctgacggattaagcagaacctgcagcctccaaaagatccaggacctgcttctgaagctggtgtgaagccaggaggagttggcaccgatgtgccagagaggactggcaaagggatattcagttccgagaaaagcactccaagaatcgagcgggagataagatgtttacgtcatgataatgccactgttgggactcagaagtttttttttttttttattaaaatgagtcctgtgctcttgatggcattattgctgcaagttac

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