LOCUS       XM_009860079            1591 bp    mRNA    linear   INV 22-OCT-2018
DEFINITION  PREDICTED: Ciona intestinalis 39S ribosomal protein L46,
            mitochondrial (LOC100182692), mRNA.
ACCESSION   XM_009860079
VERSION     XM_009860079.3
DBLINK      BioProject: PRJNA187185
KEYWORDS    RefSeq.
SOURCE      Ciona intestinalis (vase tunicate)
  ORGANISM  Ciona intestinalis
            Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia;
            Cionidae; Ciona.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_020169.2) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Oct 22, 2018 this sequence version replaced XM_009860079.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Ciona intestinalis Annotation
                                           Release 104
            Annotation Version          :: 104
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.1
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1591
                     /organism="Ciona intestinalis"
                     /mol_type="mRNA"
                     /db_xref="taxon:7719"
                     /chromosome="4"
     gene            1..1591
                     /gene="LOC100182692"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 mRNA, 86 ESTs, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 219 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:100182692"
     CDS             266..1159
                     /gene="LOC100182692"
                     /codon_start=1
                     /product="39S ribosomal protein L46, mitochondrial"
                     /protein_id="XP_009858381.1"
                     /db_xref="GeneID:100182692"
                     /translation="

MNVSKCSSVLHGRFYPCFFNSIKQTKIPKRALTTQPNRSCDLDVETLSANRDPSPWKICAAVCLIRLPILTTELEEIEKKYAELSDLNEYERSVLSDWEVEKNRQANLIRDIESGEKNPEDMDFKVANQDIEEMNELEAQQFYEENETITIEDSDRTNINRQPNETLVMVTQQKLGKDNVWMLPVEPWSKEETLRECAERALISHCGTDVGAAFISNGPSGFYKYKFPKDARENSLVGAKLFIYNAYLPRVFIKDSKFTFPTKLCEDKVLQHAWLTKDELKSFTKPKFTNVIKKILL"

     misc_feature    431..>742
                     /gene="LOC100182692"
                     /note="39S mitochondrial ribosomal protein L46; Region:
                     MRP-L46; pfam11788"
                     /db_xref="CDD:432074"
     misc_feature    728..1147
                     /gene="LOC100182692"
                     /note="Nudix hydrolase is a superfamily of enzymes found
                     in all three kingdoms of life, and it catalyzes the
                     hydrolysis of NUcleoside DIphosphates linked to other
                     moieties, X. Enzymes belonging to this superfamily require
                     a divalent cation, such as Mg2+ or Mn2+...; Region:
                     Nudix_Hydrolase; cl00447"
                     /db_xref="CDD:444909"
     misc_feature    order(821..829,842..868)
                     /gene="LOC100182692"
                     /note="nudix motif; other site"
                     /db_xref="CDD:239217"
ORIGIN      

tacctaaagttacgtgttgttgggaatacgagaaacaagcacaacgaatgagctacgatgaattagtgggaccagcttcaagacactttaacgtgacaccgttgttatgaaaaaagtacatcggacgtacaaattcagagctatgcaatgtaatcaaacatatttgtgccatttattttaagtatactatgttgacctatacttgtaacttgttttcaggtcttgtgtgttttgtattatgtctgtttaaactattactctagatatgaatgtttcgaaatgttccagtgtactacatggcagattttacccatgtttcttcaactctatcaaacaaacgaagattccaaaaagagcgctaactacacaaccaaatcgttcatgtgacttggatgtggaaacactctcagcaaacagagatccctctccatggaaaatatgcgcagctgtttgtttgattcgtcttccaatcttaacaacagaactcgaagaaatagaaaaaaaatatgctgagctcagcgatttaaacgaatatgaaagaagtgttttaagcgactgggaagttgagaaaaacagacaagctaaccttattagagacatagagagtggtgaaaagaatccagaagatatggattttaaagttgccaaccaagatattgaagaaatgaatgaattggaggcacaacagttctatgaagaaaatgaaacaattaccattgaagattctgaccgaacaaatataaatcgacaaccaaacgaaacactggtgatggtgacgcaacaaaagctgggcaaggataatgtttggatgttaccggttgaaccttggtctaaagaagaaacacttagagagtgtgctgaaagagcgttaatatctcactgtgggacagacgttggtgcggcgttcatctcaaatggcccgtcagggttttataaatataaattcccaaaagacgcacgcgagaattccctggtcggagcaaaactgttcatctacaacgcatatctacccagagtttttataaaagactctaaatttacatttcctaccaagctatgcgaggataaagtgttgcaacatgcatggcttacgaaagacgaacttaaaagttttacaaaacctaaatttacaaatgtcatcaagaaaatattgctgtgatatatccgctgttcattttgtttgcaacacatttatcatttttaaggtagctttgtaaatttgaccgcatttttctcaaactataacctttataaaacctaaatttacaaatgtcatcaagaaaatattgctgtgatatatccgccgttcattttgtttgcaacacatttatcatttttaaggtagctttgtaaatttgaccgcatttttcccaaactataacctttataaaatacacacaggttttaaatacctggtaacaaagcatttgcttgaaattttccagtttattcaaagtgaattactgaattttataccatcttatccgtaagaaaacattgttcaagtaaaaccaaactgtttagttttgcatctcgtcatgtttattcttcttgtattgttaaacataaatacacttgtatatgatacaca

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