LOCUS       XM_002130226            1989 bp    mRNA    linear   INV 22-OCT-2018
DEFINITION  PREDICTED: Ciona intestinalis sphingosine-1-phosphate phosphatase 2
            (LOC100182290), mRNA.
ACCESSION   XM_002130226
VERSION     XM_002130226.4
DBLINK      BioProject: PRJNA187185
KEYWORDS    RefSeq.
SOURCE      Ciona intestinalis (vase tunicate)
  ORGANISM  Ciona intestinalis
            Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia;
            Cionidae; Ciona.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_004190420.2) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Oct 22, 2018 this sequence version replaced XM_002130226.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Ciona intestinalis Annotation
                                           Release 104
            Annotation Version          :: 104
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.1
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1989
                     /organism="Ciona intestinalis"
                     /mol_type="mRNA"
                     /db_xref="taxon:7719"
                     /chromosome="Unknown"
     gene            1..1989
                     /gene="LOC100182290"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 mRNAs, 64 ESTs, 2 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 205 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:100182290"
     CDS             267..1517
                     /gene="LOC100182290"
                     /codon_start=1
                     /product="sphingosine-1-phosphate phosphatase 2"
                     /protein_id="XP_002130262.1"
                     /db_xref="GeneID:100182290"
                     /translation="

MDLLWRFTDYFMDFNKVRHFQELCGLQEAKLNLDSTSNGTINEEQDGTESLYSSASKNHPKSDLKQRLHKPASCCDVDQLNDDCSQPQTEPSATIPYVVTNWLLYHMFRFGSTLGHEIFYITCIPCIFWNMDPFIGRKMITVWVVTMYIGQALKDIIKWPRPTWPPVFKLETRVAAEYGIPSTHAIAGTALPFSMLMAMNGRYVFNWELGVLLACMWCALVGFSRIYVGMHSYLDVMAGITLTAAYLILGWPFMELVDEYTLTSKFAPWIIITSHFLLGVIYPNTDRYSTTRGDTIIILGVGAGCHCSSWLHHQYGFLFEPRGSLPYDINLPTFQEIYIGFARAMIGCVITILSRFMFKYLSLFVVCHAVGVSKNDPNARQRKDVEVAYKFITYACVAFVGIGMVPIILEAIGVTF"

     misc_feature    570..1013
                     /gene="LOC100182290"
                     /note="PAP2_like proteins, sphingosine-1-phosphatase
                     subfamily. Sphingosine-1-phosphatase is an intracellular
                     enzyme located in the endoplasmic reticulum, which
                     regulates the level of sphingosine-1-phosphate (S1P), a
                     bioactive lipid. S1P acts as a second...; Region:
                     PAP2_SPPase1; cd03388"
                     /db_xref="CDD:239482"
     misc_feature    order(726..728,747..749,810..818,939..941,957..959,
                     969..971)
                     /gene="LOC100182290"
                     /note="active site"
                     /db_xref="CDD:239482"
ORIGIN      

aacctaacaattggtgtgaatattaaacttttgtactccgtgctggcaatgcatttctcttttgtcactcggagcgcttgccggtttgcgctttgtttcttctattctctcgttgagcatacagatcatgcgctctgtcacggggctggcaagaagagattgtaaagcaaacgttcgttggttgctatagtataaataacagcgtgggcgcgcccctttcaacgatagtttgtcggcgctgtgagtggttactaagtttcaatataatggatctgctttggaggtttactgattattttatggactttaacaaggtccgacattttcaagaactatgtggactacaagaggcaaaacttaatttagacagtacatcaaatggcacaataaacgaggaacaagatggaacagaatcgttgtactccagcgccagcaaaaaccacccaaagtcagatttaaagcaaagattgcataaaccagcatcctgctgtgacgtagatcagttgaatgacgactgtagtcaaccacaaacagagccgagtgcaaccataccatacgttgtaaccaactggctgttgtaccatatgttccggttcggttcaacgctgggacacgaaatattttatatcacatgtattccatgcatattctggaacatggatccttttattggaagaaaaatgatcactgtttgggtggtaaccatgtacataggacaggcattgaaggatattataaaatggccgcgaccaacttggccacctgtgttcaaacttgaaacaagggtagcagcagaatatggaataccatcaacccatgcgattgctggaactgctttaccattctcaatgctaatggcaatgaatgggagatatgtgttcaattgggagctaggagttcttcttgcatgtatgtggtgtgcattggtgggcttcagcagaatttatgttggaatgcattcctatttggatgttatggctgggattacccttactgctgcttatcttatccttggttggccattcatggaattggttgatgaatatacactcacaagtaaatttgccccatggatcatcataacatcgcacttcctacttggtgtaatctacccaaacactgatcgctacagtacaaccagaggtgacacgattatcatacttggtgtaggggcaggttgtcattgttcttcatggttgcaccatcaatatggctttctttttgagccgagaggtagtttgccctacgatatcaacctacctacattccaagaaatatacatcggctttgctcgtgcaatgatcggctgcgtcatcacgatcctatcacgatttatgttcaagtacctatctctgttcgtggtttgtcacgccgttggtgtatcgaaaaacgatcccaacgcccgtcaacgaaaagacgttgaggttgcatacaagttcatcacatatgcttgcgttgcattcgtcgggatcggaatggttccaatcattcttgaagcaatcggcgtaaccttttagttttcaccaatagttgttcacgtctccagtgttaaacctatgcataatgcatggacagaaaatcaaaccatcgtacccttaagtttatttgcaagccagctgttttcgcactataatgcaaaggttgaataggtgttgtatttttaaatcagccgctctaatcacttttttaccaatagcgacccgtccgtttgttgagtttcattttcgctctttctccaagctagaaaaccttttaattgtacattctgtgacccaatgccttaaagatttattttgtataccgtatatatatataccttcttactaacattgtgttctaacgccatgatatgcactaagtcctttatctcaaaacactggtaccgaacgaagcagaaccatgcatgcttatctgcgtgttttaaacgtccactgaatgtcgcaccacgacagcttagtttgcttggaataaatgccaaccaaccgggaa

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