LOCUS       XM_002127295            1017 bp    mRNA    linear   INV 22-OCT-2018
DEFINITION  PREDICTED: Ciona intestinalis mesencephalic astrocyte-derived
            neurotrophic factor homolog (LOC100178512), mRNA.
ACCESSION   XM_002127295
VERSION     XM_002127295.5
DBLINK      BioProject: PRJNA187185
KEYWORDS    RefSeq.
SOURCE      Ciona intestinalis (vase tunicate)
  ORGANISM  Ciona intestinalis
            Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia;
            Cionidae; Ciona.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_020170.2) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Oct 22, 2018 this sequence version replaced XM_002127295.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Ciona intestinalis Annotation
                                           Release 104
            Annotation Version          :: 104
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.1
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Ciona intestinalis"
                     /mol_type="mRNA"
                     /db_xref="taxon:7719"
                     /chromosome="5"
     gene            1..1017
                     /gene="LOC100178512"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 mRNA, 242 ESTs, 13 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 224 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:100178512"
     CDS             164..700
                     /gene="LOC100178512"
                     /codon_start=1
                     /product="mesencephalic astrocyte-derived neurotrophic
                     factor homolog"
                     /protein_id="XP_002127331.1"
                     /db_xref="GeneID:100178512"
                     /translation="

MANSFFNTELLFISFVAILFIILPVNSKDEAECEVCLKFLTKFQDTLSKEGISDLKSIDEKLREVCKKARGKENRFCYYIGGTEDAATGLLQEVTKPCSYHLPPQKICEKLKKKDAQICELRYEKQIDWKNVNLNKMRVKQLKKILMDWGEECKGCLEKQEFVDRVKELIPQYVKDEL"

     misc_feature    257..544
                     /gene="LOC100178512"
                     /note="ARMET, N-terminal; Region: ARMET_N; pfam20145"
                     /db_xref="CDD:437977"
     misc_feature    554..682
                     /gene="LOC100178512"
                     /note="Degradation arginine-rich protein for mis-folding;
                     Region: Armet; pfam10208"
                     /db_xref="CDD:431135"
ORIGIN      

cctacctttaagtgataaattcatattttcagatgtttcagagagcaaaatagtatccaatatatactgaatatatatagcgttttatacgaacttgaagagacaacttcgtttaacatttgattaaagagtgtcttatataagagattactgatttgcaattatggcaaactcattcttcaatactgaacttttatttatttcttttgttgccattctctttatcattctcccagttaatagtaaagacgaagctgaatgtgaagtttgcttaaagtttttgacaaagtttcaagacaccttaagtaaagaaggcattagtgatctaaaatctattgatgagaaactgagagaagtttgcaaaaaagcaagaggaaaagagaacagattttgctactacattggagggactgaagatgctgcaactgggttgttacaagaagtcacaaagccttgcagctaccacttgccaccacagaaaatttgtgaaaaattaaaaaagaaagacgcgcaaatttgtgaacttcgatatgagaaacaaattgattggaaaaatgtaaacttgaacaagatgcgcgttaagcaattgaagaaaatccttatggattggggtgaagaatgtaaaggttgtttagaaaaacaagagtttgtcgatcgtgtcaaagaacttattccacaatatgtcaaagatgaattgtagaccagttgtttttttgttaatttttctttaagttaggcaagtttatatcacactactgatatactgtattatgtgttgataaacgtaacaactgtaattgctttttaagctgcttataacaaatacaacttcattccatacgcagctatttctttcattttaaaaatcctgcagtaaatcataactttttacaacgatcatacgctacattactatttggctgagttggagatattattattaaacactttggttgttttattgtgtttttagtttcatttttggttacgctggaagaaattgtgaaatgaacttaa

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