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2024-05-02 17:05:20, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       NM_001032656            1775 bp    mRNA    linear   INV 04-MAY-2019
DEFINITION  Ciona intestinalis Myc-induced nuclear antigen with a molecular
            mass of 53 kDa-like 1 (mina53-like1), mRNA.
ACCESSION   NM_001032656
VERSION     NM_001032656.1
KEYWORDS    RefSeq.
SOURCE      Ciona intestinalis (vase tunicate)
  ORGANISM  Ciona intestinalis
            Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia;
            Cionidae; Ciona.
REFERENCE   1  (bases 1 to 1775)
  AUTHORS   Tokuoka M, Imai KS, Satou Y and Satoh N.
  TITLE     Three distinct lineages of mesenchymal cells in Ciona intestinalis
            embryos demonstrated by specific gene expression
  JOURNAL   Dev. Biol. 274 (1), 211-224 (2004)
   PUBMED   15355799
REFERENCE   2  (bases 1 to 1775)
  AUTHORS   Satou Y, Yamada L, Mochizuki Y, Takatori N, Kawashima T, Sasaki A,
            Hamaguchi M, Awazu S, Yagi K, Sasakura Y, Nakayama A, Ishikawa H,
            Inaba K and Satoh N.
  TITLE     A cDNA resource from the basal chordate Ciona intestinalis
  JOURNAL   Genesis 33 (4), 153-154 (2002)
   PUBMED   12203911
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AB178237.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB178237.2, AK115936.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN06445658 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1775
                     /organism="Ciona intestinalis"
                     /mol_type="mRNA"
                     /db_xref="taxon:7719"
     gene            1..1775
                     /gene="mina53-like1"
                     /note="Myc-induced nuclear antigen with a molecular mass
                     of 53 kDa-like 1"
                     /db_xref="GeneID:494417"
     exon            1..126
                     /gene="mina53-like1"
                     /inference="alignment:Splign:2.1.0"
     exon            127..269
                     /gene="mina53-like1"
                     /inference="alignment:Splign:2.1.0"
     CDS             210..1547
                     /gene="mina53-like1"
                     /note="Ci-Mina53-like1"
                     /codon_start=1
                     /product="Myc-induced nuclear antigen with a molecular
                     mass of 53 kDa-like 1"
                     /protein_id="NP_001027828.1"
                     /db_xref="GeneID:494417"
                     /translation="
MPARLKWTDEYMKENYGDLRVKLESKYEKDFKPEGDRGMGQDSMRRFLDTYIEHDKYMVSQLPDPLSEEVTVPQPILCGSFRERILEANIWMSSGNTKSLLHRDADNAFNCLLNGTKDWILIDPVHQDLLPVAVESGSPYGGYTLINVNKVDLIEFPEFKEVPWYYANVSAGDCLFLPKGHWHQVRSYGAKNLAVSILFSRLNDFNPKGCPKEGVPPSELLSEVPMVWTYDGFEAQTMGNADPFELKDELEMKCKHAEGKLTLEMFEEDMISGLDVEEEAYKGTLKVDADEYEIPDENIEIMKQRAKAIMDLIDPENIGYYDCSQLEDMTVDTLKKISDIKDPDPANTDQYEFLHLHPNLVRKTILSSLELSKESFMEKYHSHEGSMAGAQWIFETLDSDNDGRCTVAEVKGNMEKVLERFQDSLLADVTAHQAKKINQNSKDEL"
     misc_feature    213..824
                     /gene="mina53-like1"
                     /note="Cupin-like domain; Region: Cupin_8; pfam13621"
                     /db_xref="CDD:433355"
     exon            270..517
                     /gene="mina53-like1"
                     /inference="alignment:Splign:2.1.0"
     exon            518..618
                     /gene="mina53-like1"
                     /inference="alignment:Splign:2.1.0"
     exon            619..747
                     /gene="mina53-like1"
                     /inference="alignment:Splign:2.1.0"
     exon            748..949
                     /gene="mina53-like1"
                     /inference="alignment:Splign:2.1.0"
     exon            950..1133
                     /gene="mina53-like1"
                     /inference="alignment:Splign:2.1.0"
     exon            1134..1294
                     /gene="mina53-like1"
                     /inference="alignment:Splign:2.1.0"
     exon            1295..1500
                     /gene="mina53-like1"
                     /inference="alignment:Splign:2.1.0"
     exon            1501..1757
                     /gene="mina53-like1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
tgttgttttatattgttggtgtttgtatttatgtgcaagttgcactaagtgtagagagtgttccacgtggtcataatgagtggttgggctttcatagaccagctgaaagccacattgatgttttaactgaagttcccaccccacaaaagttctgggaggattattgtagtttgggcaaaccagtcttgttgaagggaattgcattggatatgcctgcaaggctgaaatggacagatgaatacatgaaagaaaactatggggatttgagggtgaaacttgaaagcaaatatgaaaaagacttcaaacctgagggtgatcgtggtatgggtcaagactccatgcgacgattccttgacacctatattgagcatgacaagtacatggtgtcacagttacctgacccactctcagaagaagtaacagtcccccaaccaatcttatgtggttcattccgggagagaattctggaagcaaatatttggatgagttcaggaaacacaaagagtttgttgcacagagatgcagacaatgctttcaattgtcttttgaacggaacaaaagattggattctgattgaccctgtgcatcaggaccttctgcctgttgctgtagaaagtggttcaccatatggcgggtacacactaatcaatgtgaacaaagttgatttgatagaatttccagaattcaaagaagtaccgtggtattacgcgaatgtatctgcaggagattgtctgtttcttcctaaaggacattggcaccaggttcgatcctacggagcgaaaaacttggctgtgagcatcttgttttcgcgcttgaatgattttaatcccaaaggctgccccaaggagggagttcctccttcagagttgttaagtgaggtaccgatggtgtggacatacgacgggtttgaggctcaaactatgggaaatgcagatccatttgagttgaaagatgagcttgagatgaagtgcaaacatgcagaggggaaactaactcttgagatgttcgaggaagacatgatatctgggttggatgtggaggaagaagcttacaaaggaacgcttaaggtggatgcggatgaatacgagattcctgatgaaaatatcgagattatgaagcaaagagctaaagcgatcatggacctcattgatcctgaaaatattggatattatgattgtagtcaacttgaggatatgacagtagacacactgaagaaaatatcggatataaaagatccagatcctgctaataccgatcaatatgaattcttacatcttcatcccaatcttgttaggaaaactattctgagttctcttgaattatcgaaagaaagtttcatggaaaaatatcattcacacgagggttcgatggccggggctcaatggatctttgagactttggattcggacaatgacggtcgatgcacagtggctgaagtaaagggaaatatggagaaggttttggaaagattccaagacagtttgcttgcagatgttacagcccaccaagctaagaagatcaatcaaaattccaaggatgaattatgatcacgttatatttgatgccataagagatttgccacgatgagattattttatttgtaaaatccacttttgatcgtctgttcaatcggtatcttgtgcaatttgtacaataataaaagaaaaagaaatagttttattgaggtggcagttccaaacatgctgcatgtaatatagcagccacatcctgccagataaataaaacattaaaactgtaaaaaaaaaaaaaaaaaa
//

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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]